BLASTX nr result

ID: Lithospermum22_contig00009194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009194
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554103.1| PREDICTED: psbP domain-containing protein 6,...   296   3e-78
ref|XP_002307956.1| predicted protein [Populus trichocarpa] gi|2...   282   3e-74
ref|NP_001242704.1| uncharacterized protein LOC100813771 [Glycin...   281   5e-74
ref|XP_003624904.1| PsbP domain-containing protein [Medicago tru...   281   7e-74
ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloropl...   272   3e-71

>ref|XP_003554103.1| PREDICTED: psbP domain-containing protein 6, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  296 bits (757), Expect = 3e-78
 Identities = 150/201 (74%), Positives = 175/201 (87%), Gaps = 6/201 (2%)
 Frame = +3

Query: 51  TSKFWLTQNLSSNQIPLCGKFSNKYV--KHPIDVSRREFLKGVA-LMPM---VLSLPPSS 212
           TS F +T + SS+ +      +++YV  +H +   RREFLKGVA LMP+   VL  PP S
Sbjct: 7   TSLFQITVSSSSSSLHAIRASASEYVPSQHTL---RREFLKGVAALMPLPLVVLIEPPPS 63

Query: 213 DAREIDVGAFLPPAPNDPSFVIFKASSKDTPALRAGNVQPYQFIIPPSWKQLRIANILSG 392
           DARE++VG+FLPP+P+DPSFV+FKAS+KDTPALRAGNVQPY+FI+PP+WKQ R+ANILSG
Sbjct: 64  DAREVEVGSFLPPSPSDPSFVLFKASAKDTPALRAGNVQPYKFILPPTWKQARVANILSG 123

Query: 393 NYCQPKCAEPWIEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVT 572
           NYCQPKCAEPW+EVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEK+IASLGPFVT
Sbjct: 124 NYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKPNATIEDIGSPEKLIASLGPFVT 183

Query: 573 GNTFDPEELIDTSVEKLGSQT 635
           GNTFDPEEL++TSVEKLG QT
Sbjct: 184 GNTFDPEELLETSVEKLGDQT 204


>ref|XP_002307956.1| predicted protein [Populus trichocarpa] gi|222853932|gb|EEE91479.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  282 bits (722), Expect = 3e-74
 Identities = 131/165 (79%), Positives = 153/165 (92%), Gaps = 1/165 (0%)
 Frame = +3

Query: 144 VSRREFLKGVALMPMVL-SLPPSSDAREIDVGAFLPPAPNDPSFVIFKASSKDTPALRAG 320
           V RR+ LKG+ L P++L   PPSS+AREI+VG++LPP+P DPSFV+FKASSKDTPALRAG
Sbjct: 37  VLRRQILKGLVLSPLILIKAPPSSEAREIEVGSYLPPSPTDPSFVLFKASSKDTPALRAG 96

Query: 321 NVQPYQFIIPPSWKQLRIANILSGNYCQPKCAEPWIEVKFEDEKQGKVQVVASPLIRLTN 500
           NVQPYQFI+PPSWKQ R+ANILSGNYCQPKCAEPW+EVKFEDEKQGKVQVVASPLIRLTN
Sbjct: 97  NVQPYQFILPPSWKQTRVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTN 156

Query: 501 KPNATIEDIGSPEKVIASLGPFVTGNTFDPEELIDTSVEKLGSQT 635
           KPNATIE+IG+PEK+IASLGPFVTGN++DP+EL++T +EK G QT
Sbjct: 157 KPNATIEEIGNPEKLIASLGPFVTGNSYDPDELLETKIEKFGDQT 201


>ref|NP_001242704.1| uncharacterized protein LOC100813771 [Glycine max]
           gi|255636717|gb|ACU18694.1| unknown [Glycine max]
          Length = 265

 Score =  281 bits (720), Expect = 5e-74
 Identities = 133/165 (80%), Positives = 153/165 (92%), Gaps = 3/165 (1%)
 Frame = +3

Query: 150 RREFLKGVALMPM---VLSLPPSSDAREIDVGAFLPPAPNDPSFVIFKASSKDTPALRAG 320
           RREFLKGVALMP+   V+  PP S ARE++VG+FLPP+P+DPSFV+FKA+ KDTPA RAG
Sbjct: 45  RREFLKGVALMPLPLVVMREPPPSHAREVEVGSFLPPSPSDPSFVLFKATPKDTPAPRAG 104

Query: 321 NVQPYQFIIPPSWKQLRIANILSGNYCQPKCAEPWIEVKFEDEKQGKVQVVASPLIRLTN 500
           NVQPY+FI+PP+WKQ R+ANILSGNYCQPKCAEPW+EVKFEDEKQGKVQVVASPLIRLTN
Sbjct: 105 NVQPYKFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTN 164

Query: 501 KPNATIEDIGSPEKVIASLGPFVTGNTFDPEELIDTSVEKLGSQT 635
           KPNA+IEDIGSPEK+IASLGPFVTGNT DP+EL++TSVEK+G QT
Sbjct: 165 KPNASIEDIGSPEKLIASLGPFVTGNTLDPDELLETSVEKIGDQT 209


>ref|XP_003624904.1| PsbP domain-containing protein [Medicago truncatula]
           gi|124361218|gb|ABN09190.1| hypothetical protein
           MtrDRAFT_AC183371g14v1 [Medicago truncatula]
           gi|355499919|gb|AES81122.1| PsbP domain-containing
           protein [Medicago truncatula]
          Length = 259

 Score =  281 bits (719), Expect = 7e-74
 Identities = 135/168 (80%), Positives = 154/168 (91%), Gaps = 2/168 (1%)
 Frame = +3

Query: 138 IDVSRREFLKGVAL-MPMV-LSLPPSSDAREIDVGAFLPPAPNDPSFVIFKASSKDTPAL 311
           I V RREFLKG+AL +P++ L+ PP S ARE+ VG+FLPP+ +DPSFV+FKAS KDTPAL
Sbjct: 36  ISVPRREFLKGIALSLPLIALTEPPQSQAREVSVGSFLPPSSSDPSFVLFKASPKDTPAL 95

Query: 312 RAGNVQPYQFIIPPSWKQLRIANILSGNYCQPKCAEPWIEVKFEDEKQGKVQVVASPLIR 491
           RAGNVQPYQFI+PP+WKQLRIANILSGNYCQPKCAEPW+EVKFEDEKQGK+QVVASPLIR
Sbjct: 96  RAGNVQPYQFILPPTWKQLRIANILSGNYCQPKCAEPWVEVKFEDEKQGKIQVVASPLIR 155

Query: 492 LTNKPNATIEDIGSPEKVIASLGPFVTGNTFDPEELIDTSVEKLGSQT 635
           LTNKPNATIEDIGSPEK+IASLGPFVTGNT DP+EL++ SVEK+  QT
Sbjct: 156 LTNKPNATIEDIGSPEKLIASLGPFVTGNTLDPDELLEASVEKIDDQT 203


>ref|XP_002526199.1| Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223534477|gb|EEF36178.1| Thylakoid
           lumenal 29.8 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 260

 Score =  272 bits (696), Expect = 3e-71
 Identities = 125/163 (76%), Positives = 152/163 (93%), Gaps = 1/163 (0%)
 Frame = +3

Query: 150 RREFLKGVALMPMVL-SLPPSSDAREIDVGAFLPPAPNDPSFVIFKASSKDTPALRAGNV 326
           RR+ LKG+A+ P++L    P S+A+E++VG++LP +P+DPSFV+FKAS KDTPALRAGNV
Sbjct: 42  RRQILKGIAVSPLILIKEAPISEAKEVEVGSYLPSSPSDPSFVLFKASPKDTPALRAGNV 101

Query: 327 QPYQFIIPPSWKQLRIANILSGNYCQPKCAEPWIEVKFEDEKQGKVQVVASPLIRLTNKP 506
           QPYQFI+PP+WKQ R+ANILSGNYCQPKCAEPW+EVKFEDEKQGKVQVVASPLIRLTNKP
Sbjct: 102 QPYQFILPPTWKQARVANILSGNYCQPKCAEPWVEVKFEDEKQGKVQVVASPLIRLTNKP 161

Query: 507 NATIEDIGSPEKVIASLGPFVTGNTFDPEELIDTSVEKLGSQT 635
           NATIE+IG+PEK+IASLGPFVTGN++DP+EL++TS+EKLG QT
Sbjct: 162 NATIEEIGTPEKLIASLGPFVTGNSYDPDELLETSIEKLGDQT 204


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