BLASTX nr result

ID: Lithospermum22_contig00009121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009121
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521847.1| Armadillo repeat-containing protein, putativ...    78   1e-12
ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
gb|ADE75637.1| unknown [Picea sitchensis]                              67   3e-09
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops...    64   2e-08
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]                 64   2e-08

>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
           gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
           protein, putative [Ricinus communis]
          Length = 719

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -3

Query: 598 CKCPICSQPVSKLIPEASALSK-QDEEIVEICKNIQQYNFLYAGGMRGLFVKFRGLPLYL 422
           CKCP+C+  ++KL PEAS  S+ QD+++ ++ +N+ +YN L+ GG  GL  K R  PL++
Sbjct: 104 CKCPMCASRITKLTPEASLYSQHQDQDVTKVLENVDRYNRLFIGGALGLVQKVRESPLFI 163

Query: 421 QRISDQLLDIDRYYANFQXXXXXXXXXXXLYKLSCVGSLVFGDVSLMIRFLNFHNWIDIG 242
           +R+  Q++D DR Y+              LY  +    +  G + ++  F    +++ I 
Sbjct: 164 KRMFLQMMDPDRPYSYLHEIRLFAMMLSVLYAATPFNFIPTGGLGIVRLF----DYVAIA 219

Query: 241 SYVVLGIVFFIGAWRKRSIRRRQM 170
             +VL +V   G +R+R + +R+M
Sbjct: 220 LVLVLRLV---GIYRRRRLAQREM 240


>ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|222871353|gb|EEF08484.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 27/71 (38%), Positives = 51/71 (71%)
 Frame = -3

Query: 601 QCKCPICSQPVSKLIPEASALSKQDEEIVEICKNIQQYNFLYAGGMRGLFVKFRGLPLYL 422
           +CKCP+CS  +S L PEAS   +Q++E+V++ +++++YN ++ GG+RGL  K   +P   
Sbjct: 48  RCKCPMCSSRISNLTPEASLHGQQEQEVVKVLEDVRRYNHVFVGGVRGLARKVHVVPFLF 107

Query: 421 QRISDQLLDID 389
           +R+ ++++D D
Sbjct: 108 KRMLEEMMDPD 118


>gb|ADE75637.1| unknown [Picea sitchensis]
          Length = 266

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -3

Query: 610 SIEQCKCPICSQPVSKLIPEASALSKQD-EEIVEICKNIQQYNFLYAGGMRGLFVKFRGL 434
           +++ CKCPIC +P++ LIP  SA  ++D  E+  + +NI++YN ++ GG  G F + R  
Sbjct: 123 ALQPCKCPICRRPINLLIPCESATRRRDGPEVDSVLQNIEKYNRIFGGGSVGFFQRLRDT 182

Query: 433 PLYLQRISDQLLDIDR 386
           PL L+R+  +L+D  R
Sbjct: 183 PLLLRRLLRELMDPQR 198


>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
           thaliana] gi|87116618|gb|ABD19673.1| At4g33940
           [Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 262

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/151 (24%), Positives = 72/151 (47%)
 Frame = -3

Query: 598 CKCPICSQPVSKLIPEASALSKQDEEIVEICKNIQQYNFLYAGGMRGLFVKFRGLPLYLQ 419
           CKCP+C + ++KL PE S   +Q++E+ E+   +++YN L+ GG+ G   K   LP  ++
Sbjct: 111 CKCPMCVRHITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVK 170

Query: 418 RISDQLLDIDRYYANFQXXXXXXXXXXXLYKLSCVGSLVFGDVSLMIRFLNFHNWIDIGS 239
           R+   ++D D     F            LY  +    +  G   ++  F       D  +
Sbjct: 171 RMVWHMMDTDVNNLYFHEVRIFAMFMSTLYTAAEFNFIPTGGFRIVTVF-------DYAA 223

Query: 238 YVVLGIVFFIGAWRKRSIRRRQMAFIANAMQ 146
             ++ I+  +G +R+R + ++     A A++
Sbjct: 224 IAMILILRLVGIYRRRRLAQQVRHLAAAAIE 254


>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
          Length = 252

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/151 (24%), Positives = 72/151 (47%)
 Frame = -3

Query: 598 CKCPICSQPVSKLIPEASALSKQDEEIVEICKNIQQYNFLYAGGMRGLFVKFRGLPLYLQ 419
           CKCP+C + ++KL PE S   +Q++E+ E+   +++YN L+ GG+ G   K   LP  ++
Sbjct: 101 CKCPMCVRHITKLSPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVK 160

Query: 418 RISDQLLDIDRYYANFQXXXXXXXXXXXLYKLSCVGSLVFGDVSLMIRFLNFHNWIDIGS 239
           R+   ++D D     F            LY  +    +  G   ++  F       D  +
Sbjct: 161 RMVWHMMDTDVNNLYFHEVRIFAMFMSTLYTAAEFNFIPTGGFRIVTVF-------DYAA 213

Query: 238 YVVLGIVFFIGAWRKRSIRRRQMAFIANAMQ 146
             ++ I+  +G +R+R + ++     A A++
Sbjct: 214 IAMILILRLVGIYRRRRLAQQVRHLAAAAIE 244


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