BLASTX nr result

ID: Lithospermum22_contig00009098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009098
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251...   194   3e-47
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2...   193   4e-47
gb|AFK38753.1| unknown [Lotus japonicus]                              170   4e-40
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm...   169   8e-40
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr...   168   1e-39

>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
            gi|297740629|emb|CBI30811.3| unnamed protein product
            [Vitis vinifera]
          Length = 665

 Score =  194 bits (492), Expect = 3e-47
 Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3    AFSSEKVWFLEEEKLPVISNSSGDKS--KILMKSPWEILQKSIGSAGVLSQLSSLNLLGD 176
            AF  +KVWFLE+EKLPV+SNS G ++  KILMKSPWEILQ S+GS GV+S LSS N+L +
Sbjct: 482  AFDPKKVWFLEDEKLPVVSNSLGGENTQKILMKSPWEILQTSVGSGGVISLLSSENILDN 541

Query: 177  LSQMGVEYIKVCSIHQRCHTGQTLLGLVNSRDAHVGLQVLKHEDIVEEGQESILSVAFMK 356
            LS+MGVEYI++CS+++   +G +LLGLV+S ++ VG+Q+ +  + +EE    I S+ FM 
Sbjct: 542  LSEMGVEYIEICSVNEEFVSGHSLLGLVSSLESDVGIQISEGIEDIEENFHMIFSMKFMS 601

Query: 357  QLLKQMYELQFEAISKSNAHIEKADNDWVHVVPSSPNSYEFRCSLFWCLKTCPPDKISIL 536
            +L KQM +LQF  I K N+H+E  + +WV V P+SPNS E  CS++  L  C  DK+ ++
Sbjct: 602  KLAKQMKKLQFHGIPKLNSHVEMVEKEWVDVTPTSPNSLELGCSIYSSLNACSLDKVCVV 661

Query: 537  EV 542
            E+
Sbjct: 662  EI 663


>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
            predicted protein [Populus trichocarpa]
          Length = 673

 Score =  193 bits (491), Expect = 4e-47
 Identities = 96/185 (51%), Positives = 132/185 (71%), Gaps = 3/185 (1%)
 Frame = +3

Query: 3    AFSSEKVWFLEEEKLPVISNSS--GDKSKILMKSPWEILQKSIGSAGVLSQLSSLNLLGD 176
            AF S KVWFLEEEK+PV+S+S   G + KI+MKSPWEILQ  +GS GV+S LSS+N+  +
Sbjct: 489  AFDSNKVWFLEEEKIPVVSSSEEEGKRHKIMMKSPWEILQSPVGSGGVISLLSSVNIPEN 548

Query: 177  LSQMGVEYIKVCSIHQRCHTGQTLL-GLVNSRDAHVGLQVLKHEDIVEEGQESILSVAFM 353
            LS+MGVEYI++CS  Q C TG  LL G V SR A +G+++++    +EE  + I S+ FM
Sbjct: 549  LSKMGVEYIEICSSSQNCVTGSPLLLGFVESRKAEIGIKIVEDTKDLEESFDMIFSLNFM 608

Query: 354  KQLLKQMYELQFEAISKSNAHIEKADNDWVHVVPSSPNSYEFRCSLFWCLKTCPPDKISI 533
            + L +Q+++LQF AI K N H+E    +WV VVPSSPNSYE R S++  L  CP +KI +
Sbjct: 609  RLLAQQIHKLQFYAIPKPNLHVEMVGKEWVDVVPSSPNSYELRSSIYSSLNACPLEKICV 668

Query: 534  LEVLQ 548
            +E+ +
Sbjct: 669  MEITE 673


>gb|AFK38753.1| unknown [Lotus japonicus]
          Length = 263

 Score =  170 bits (431), Expect = 4e-40
 Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
 Frame = +3

Query: 6   FSSEKVWFLEEEKLPVISN--SSGDKSKILMKSPWEILQKSIGSAGVLSQLSSLNLLGDL 179
           F SEKVWFLEEEKLPV+S+     +K KILMKSPWEIL+  +GS G++S  S   +  DL
Sbjct: 80  FDSEKVWFLEEEKLPVVSSLLEGQNKYKILMKSPWEILESPVGSGGLISLFSKHGIADDL 139

Query: 180 SQMGVEYIKVCSIHQRCHTGQTLL-GLVNSRDAHVGLQVLKHEDIVEEGQESILSVAFMK 356
             MGVEYI++C  ++R   G +LL GLV+SR A +G+Q+      ++E  + ILS+ F+K
Sbjct: 140 MNMGVEYIELCCPNERISGGNSLLLGLVSSRTAKIGIQISPTIADLDENFDMILSMDFVK 199

Query: 357 QLLKQMYELQFEAISKSNAHIEKADNDWVHVVPSSPNSYEFRCSLFWCLKTCPPDKISIL 536
           +L KQ  +LQF+A  K+N+++EK D DWV V  ++PNSYE  CS++  L  C  D++ ++
Sbjct: 200 KLTKQSNKLQFDATPKTNSYVEKVDKDWVTVTSTTPNSYELSCSIYNSLNLCSLDQVCMV 259

Query: 537 EV 542
           +V
Sbjct: 260 QV 261


>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
           gi|223541168|gb|EEF42724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 631

 Score =  169 bits (428), Expect = 8e-40
 Identities = 88/182 (48%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
 Frame = +3

Query: 6   FSSEKVWFLEEEKLPVISNSSGDKS--KILMKSPWEILQKSIGSAGVLSQLSSLNLLGDL 179
           F ++KVWFLEEEKLPV+++S  + S  KILMKSPWEILQ  +GS GV+S LS+  +   L
Sbjct: 448 FDTDKVWFLEEEKLPVVNSSYEEPSRCKILMKSPWEILQVPVGSGGVISLLSTHGIPEIL 507

Query: 180 SQMGVEYIKVCSIHQRCHTGQTLL-GLVNSRDAHVGLQVLKHEDIVEEGQESILSVAFMK 356
           ++M V+YI+VCS+ Q    G  LL G VNS  A +GLQ+ +  +  EE  + I S + MK
Sbjct: 508 NKMDVKYIEVCSVGQNNVLGNALLLGYVNSCKAEIGLQIFEDTEGSEESFDMIFSNSSMK 567

Query: 357 QLLKQMYELQFEAISKSNAHIEKADNDWVHVVPSSPNSYEFRCSLFWCLKTCPPDKISIL 536
           +L ++M +LQF  ISK N+++E  D +W  ++PSSPNSY+F  S++  L  CP DKI ++
Sbjct: 568 RLTEEMDKLQFHTISKPNSYVELVDKEWTDIIPSSPNSYQFYSSIYSALNGCPLDKICVI 627

Query: 537 EV 542
           E+
Sbjct: 628 EI 629


>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
            gi|355523914|gb|AET04368.1| Ribosome maturation factor
            rimM [Medicago truncatula]
          Length = 667

 Score =  168 bits (426), Expect = 1e-39
 Identities = 92/193 (47%), Positives = 127/193 (65%), Gaps = 13/193 (6%)
 Frame = +3

Query: 3    AFSSEKV----------WFLEEEKLPVISNS--SGDKSKILMKSPWEILQKSIGSAGVLS 146
            AF SEKV          WFLEEEKLPV+S+S    +K KILMKSPWEILQ  +GS G +S
Sbjct: 473  AFDSEKVHIISSTFPFVWFLEEEKLPVVSSSLEGQNKYKILMKSPWEILQSPVGSGGFIS 532

Query: 147  QLSSLNLLGDLSQMGVEYIKVCSIHQRCHTGQTLL-GLVNSRDAHVGLQVLKHEDIVEEG 323
              S  ++  +L  MGVEY+++C   +R   G +LL GLV++R+A +G+Q+       +E 
Sbjct: 533  LFSKHSITDNLINMGVEYLELCCPCERSVGGNSLLVGLVDAREAKIGIQISPTIADPDEN 592

Query: 324  QESILSVAFMKQLLKQMYELQFEAISKSNAHIEKADNDWVHVVPSSPNSYEFRCSLFWCL 503
             + ILS+ F+K+L KQ Y+L+F+A +K+N+ IE  D DWV V  S+PNSYE  CS++  L
Sbjct: 593  FDMILSMEFVKKLTKQSYKLRFDATAKTNSFIESVDKDWVTVTSSTPNSYELSCSVYSSL 652

Query: 504  KTCPPDKISILEV 542
              CP DK+ I+EV
Sbjct: 653  NACPLDKVCIVEV 665


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