BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00009097
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   434   e-119
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   433   e-119
ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [M...   429   e-118
gb|AFK41000.1| unknown [Medicago truncatula]                          428   e-117
pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4...   428   e-117

>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera]
            gi|147783136|emb|CAN70905.1| hypothetical protein
            VITISV_044176 [Vitis vinifera]
            gi|147795384|emb|CAN74235.1| hypothetical protein
            VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  434 bits (1115), Expect = e-119
 Identities = 205/268 (76%), Positives = 240/268 (89%)
 Frame = -1

Query: 1071 MGLIEEAHNVRVVGSGEKIIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPE 892
            MG++EEAHN++VVGSGE+IIVL HGFGTDQS+WKHLVPHLVDDYRV+L+DNMGAGTTNPE
Sbjct: 1    MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60

Query: 891  YFDFDRYATLEGYAYDLIALLEELGIVSCIFVGHSLSSMTGVIASIFRPDLFSKLLMISA 712
            YFDF+RY+ LEGYAYD++A+LEEL + SCIFVGHS+S+M G IASI RPDLFSKL+ I+ 
Sbjct: 61   YFDFERYSNLEGYAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISING 120

Query: 711  SPRFLNTDDYYGGFESDDIKQLGEAMESNYESWCSGFAPLVVGGDMDSVAVQEFSRTLFN 532
            SPR+LN  DYYGGFE +D+ QL EAM SNY++WCSGFAPL VGGDMDSVAVQEFSRTLFN
Sbjct: 121  SPRYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 531  MRPDIAMSVFKTIFQFDLRHYLSNVTVPCHIIQSSKDLAVPVAVSEYLHKNLGGTSIVEV 352
            MRPDIA+SV +TIFQ DLR  L +VTVPCHI+QS KDLAVPV VSEYLH+NLGG SIVEV
Sbjct: 181  MRPDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEV 240

Query: 351  MSTEGHLPQLSLPEITIPVILRHIHNDI 268
            M+++GHLPQLS P+I +PV+LRHI  +I
Sbjct: 241  MTSDGHLPQLSSPDIVVPVLLRHIRYNI 268


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
            communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
            regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  433 bits (1114), Expect = e-119
 Identities = 200/268 (74%), Positives = 242/268 (90%)
 Frame = -1

Query: 1071 MGLIEEAHNVRVVGSGEKIIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPE 892
            MG++EEAHNV+++G+GE++IVL HGFGTDQSVWKHLVPHL+DD++VVL+DNMGAGTTNP+
Sbjct: 1    MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 891  YFDFDRYATLEGYAYDLIALLEELGIVSCIFVGHSLSSMTGVIASIFRPDLFSKLLMISA 712
            YFDF+RYA LEGYAYDL+A+LEEL + SC+FVGHS+S+M GV+ASI RPDLF+K++MISA
Sbjct: 61   YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISA 120

Query: 711  SPRFLNTDDYYGGFESDDIKQLGEAMESNYESWCSGFAPLVVGGDMDSVAVQEFSRTLFN 532
            SPR+LN  DYYGGFE +D+ QL EAME+NY++WCSGFAPL VGGDMDSVAVQEFSRTLFN
Sbjct: 121  SPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 531  MRPDIAMSVFKTIFQFDLRHYLSNVTVPCHIIQSSKDLAVPVAVSEYLHKNLGGTSIVEV 352
            MRPDIA+SV +TIFQ D+R  L  V+VPCHI+QS KDLAVPV VSEYLH+NLG  SI EV
Sbjct: 181  MRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEV 240

Query: 351  MSTEGHLPQLSLPEITIPVILRHIHNDI 268
            MST+GHLPQLS P++ IPV+LRHI ++I
Sbjct: 241  MSTDGHLPQLSSPDVVIPVLLRHIRHNI 268


>ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [Medicago truncatula]
            gi|355509512|gb|AES90654.1| Sigma factor sigB regulation
            protein rsbQ [Medicago truncatula]
          Length = 270

 Score =  429 bits (1102), Expect = e-118
 Identities = 199/269 (73%), Positives = 241/269 (89%)
 Frame = -1

Query: 1071 MGLIEEAHNVRVVGSGEKIIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPE 892
            MG++EEAHNV+V+GSG + IVL HGFGTDQSVWKHLVPHL+D++RV+LYDNMGAGTTNP+
Sbjct: 1    MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 891  YFDFDRYATLEGYAYDLIALLEELGIVSCIFVGHSLSSMTGVIASIFRPDLFSKLLMISA 712
            YFDF+RY+TLEGYAYDL+A+LEEL + SCIFVGHS+S+M G +ASI RPDLF+K+++ISA
Sbjct: 61   YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 711  SPRFLNTDDYYGGFESDDIKQLGEAMESNYESWCSGFAPLVVGGDMDSVAVQEFSRTLFN 532
            SPR+LN  DY+GGFE +D+ QL +AM SNY+SWCSGFAP+ VGGDM+SVAVQEFSRTLFN
Sbjct: 121  SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 531  MRPDIAMSVFKTIFQFDLRHYLSNVTVPCHIIQSSKDLAVPVAVSEYLHKNLGGTSIVEV 352
            MRPDIA+SV +TIF+ D+R  L  VTVPCHIIQS KDLAVPV V+EYLH+++G  SIVEV
Sbjct: 181  MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 351  MSTEGHLPQLSLPEITIPVILRHIHNDIA 265
            MSTEGHLPQLS P++ IPVIL+HI +DIA
Sbjct: 241  MSTEGHLPQLSSPDVVIPVILKHIRHDIA 269


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  428 bits (1101), Expect = e-117
 Identities = 198/269 (73%), Positives = 241/269 (89%)
 Frame = -1

Query: 1071 MGLIEEAHNVRVVGSGEKIIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPE 892
            MG++EEAHNV+V+GSG + IVL HGFGTDQSVWKHLVPHL+D++RV+LYDNMGAGTTNP+
Sbjct: 1    MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 891  YFDFDRYATLEGYAYDLIALLEELGIVSCIFVGHSLSSMTGVIASIFRPDLFSKLLMISA 712
            YFDF+RY+TLEGYAYDL+A+LEEL + SCIFVGHS+S+M G +ASI RPDLF+K+++ISA
Sbjct: 61   YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 711  SPRFLNTDDYYGGFESDDIKQLGEAMESNYESWCSGFAPLVVGGDMDSVAVQEFSRTLFN 532
            SPR+LN  DY+GGFE +D+ QL +AM SNY+SWCSGFAP+ VGGDM+SVAVQEFSRTLFN
Sbjct: 121  SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 531  MRPDIAMSVFKTIFQFDLRHYLSNVTVPCHIIQSSKDLAVPVAVSEYLHKNLGGTSIVEV 352
            MRPDIA+SV +TIF+ D+R  L  VTVPCHIIQS KDLAVPV V+EYLH+++G  SIVEV
Sbjct: 181  MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 351  MSTEGHLPQLSLPEITIPVILRHIHNDIA 265
            MSTEGHLPQLS P++ +PVIL+HI +DIA
Sbjct: 241  MSTEGHLPQLSSPDVVVPVILKHIRHDIA 269


>pdb|4HRX|A Chain A, Crystal Structure Of Kai2 gi|453056148|pdb|4HRY|A Chain A,
            The Structure Of Arabidopsis Thaliana Kai2
            gi|453056153|pdb|4HTA|A Chain A, The Structure Of The
            Karrikin Insensitive (kai2) Protein In Arabidopsis
            Thaliana
          Length = 288

 Score =  428 bits (1100), Expect = e-117
 Identities = 204/270 (75%), Positives = 238/270 (88%)
 Frame = -1

Query: 1071 MGLIEEAHNVRVVGSGEKIIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPE 892
            MG++EEAHNV+V+GSGE  IVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNP+
Sbjct: 19   MGVVEEAHNVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTTNPD 78

Query: 891  YFDFDRYATLEGYAYDLIALLEELGIVSCIFVGHSLSSMTGVIASIFRPDLFSKLLMISA 712
            YFDFDRY+ LEGY++DLIA+LE+L I SCIFVGHS+S+M GV+AS+ RPDLFSK++MISA
Sbjct: 79   YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISA 138

Query: 711  SPRFLNTDDYYGGFESDDIKQLGEAMESNYESWCSGFAPLVVGGDMDSVAVQEFSRTLFN 532
            SPR++N  DY GGFE +D+ QL EA+ SNY++WC GFAPL VGGDMDS+AVQEFSRTLFN
Sbjct: 139  SPRYVNDVDYQGGFEQEDLNQLFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFN 198

Query: 531  MRPDIAMSVFKTIFQFDLRHYLSNVTVPCHIIQSSKDLAVPVAVSEYLHKNLGGTSIVEV 352
            MRPDIA+SV +TIFQ D+R  L  VTVPCHI+QS KDLAVPV VSEYLH NLG  S+VEV
Sbjct: 199  MRPDIALSVGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEV 258

Query: 351  MSTEGHLPQLSLPEITIPVILRHIHNDIAL 262
            + ++GHLPQLS P+  IPVILRHI NDIA+
Sbjct: 259  IPSDGHLPQLSSPDSVIPVILRHIRNDIAM 288