BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008989
         (1775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   449   e-123
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   421   e-115
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   413   e-113
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   413   e-113
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...   405   e-110

>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Cucumis sativus]
          Length = 452

 Score =  449 bits (1154), Expect = e-123
 Identities = 238/451 (52%), Positives = 303/451 (67%), Gaps = 18/451 (3%)
 Frame = -2

Query: 1729 MSIAADSLLSYRSSDDFALFLESQLDV----ASEEDEFEGFNCTNELNDHPRIKRPKLD- 1565
            MS+A +S     SSDDFA FL   LD     +S ++E EG N    +    RIKR K++ 
Sbjct: 1    MSLATNSPAHSSSSDDFAAFLAVDLDSHSSDSSPDEETEGDNNAESV----RIKRRKVEK 56

Query: 1564 ----DSDPHNSISGES----HIENVYPHPGVMGGMCIRCGHIVDSESGVKLSYIHEGMRL 1409
                + D  + +  +S      + +  HPG  G MCI CG  +D ESGV   YIH+ +RL
Sbjct: 57   LENSEEDIMHEVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDEESGVTFGYIHKELRL 116

Query: 1408 AKYEIARLWSKG----LMSNKXXXXXXXXXXXLNSTRFEDITPEERYLTAPKEALPDAIK 1241
               EI R+ +K     L   K           LNST    +T EE YL +  ++L D  K
Sbjct: 117  NNDEINRMRNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEEEYLRSQTDSLDDVTK 176

Query: 1240 GNSLFHLESIHMMTKLRPYVSEFLSEASRLFEMYIYTMGQRSYANRVAKILDPDNVYFNT 1061
            G SLF L S+H MTKLRP+V  FL EAS+LFEMYIYTMG+R YA  +AK+LDP   YF++
Sbjct: 177  G-SLFLLNSVHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKLLDPKKEYFSS 235

Query: 1060 RVIAQEDCTQSHQKGLDVVLGQESCILILDDTEAVWSKHKENLILMERYHFFQSSCKQFG 881
            +VI+++D TQ HQKGLDVVLG+ES +LILDDTE  W+KHKENLILMERYHFF SSC+QFG
Sbjct: 236  KVISRDDGTQKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILMERYHFFASSCRQFG 295

Query: 880  VKCKSLSEKKEDEIEDDGALATILKILQRVHSLYFDQ-ENDLLNQDXXXXXXXXXKEVLQ 704
              CKSLSE K DE E DGAL TILK+L++VH ++F++   DL+++D          EVL+
Sbjct: 296  FNCKSLSELKNDESETDGALTTILKVLKQVHHMFFNEVSGDLVDRDVRQVLKTVRAEVLE 355

Query: 703  GCKIVFSRIFPTKFPGKNHRLWRMAEQLGATCSTELDESITHVVSTDVGTDKSRWAVNQN 524
            GCK+VFSR+FPTKF  +NH+LW+M EQLG TCSTELD+S+THVV+TD GT+KSRWA+ + 
Sbjct: 356  GCKVVFSRVFPTKFQAENHQLWKMVEQLGGTCSTELDQSVTHVVATDAGTEKSRWALKEK 415

Query: 523  KFLVHPGWIEACNYFWRKETEEKFPVNQEKI 431
            KFLVHP WIEA NYFW+++ EE F V Q K+
Sbjct: 416  KFLVHPRWIEASNYFWKRQMEENFTVEQTKV 446


>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  421 bits (1083), Expect = e-115
 Identities = 227/477 (47%), Positives = 300/477 (62%), Gaps = 43/477 (9%)
 Frame = -2

Query: 1729 MSIAADSLLSYR---SSDDFALFLESQLDVASEEDEF--------EGFNCTNELNDHPRI 1583
            MS+  DS L      SSDDFA  L+++LD  S   +         +  +  +++N+    
Sbjct: 1    MSLVTDSPLHSSHSSSSDDFAALLDAELDSKSSSSDSSPKAIKHDDASDANDDVNEEEEE 60

Query: 1582 KRPKLDD-SDPHNSISGESHIENVY--------------------------PHPGVMGGM 1484
            +    DD SD   +    S +E +                            HPG  G M
Sbjct: 61   EESDSDDDSDIATNRIKRSRVETLENGENPKESTRVSLDQTLVASSSKVACTHPGSFGDM 120

Query: 1483 CIRCGHIVDSESGVKLSYIHEGMRLAKYEIARLWSKGLMS----NKXXXXXXXXXXXLNS 1316
            CI CG  +  E+GV   YIH+G+RLA  EI RL +  + +     K           LNS
Sbjct: 121  CILCGERLIEETGVTFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNS 180

Query: 1315 TRFEDITPEERYLTAPKEALPDAIKGNSLFHLESIHMMTKLRPYVSEFLSEASRLFEMYI 1136
            T+   +T EE YL +  +++ D   G SLF ++ +HMMTKLRP++  FL EAS++FEMYI
Sbjct: 181  TQLMHLTAEEEYLKSQIDSMQDVSNG-SLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYI 239

Query: 1135 YTMGQRSYANRVAKILDPDNVYFNTRVIAQEDCTQSHQKGLDVVLGQESCILILDDTEAV 956
            YTMG R+YA  +AK LDP   YFN RVI+++D TQ HQKGLD+VLGQES +LILDDTE  
Sbjct: 240  YTMGDRAYALEMAKFLDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENA 299

Query: 955  WSKHKENLILMERYHFFQSSCKQFGVKCKSLSEKKEDEIEDDGALATILKILQRVHSLYF 776
            W+KHK+NLILMERYHFF SSC+QFG +CKSLS+ K DE E DGALA++LK+L+R+H ++F
Sbjct: 300  WTKHKDNLILMERYHFFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFF 359

Query: 775  DQENDLLN-QDXXXXXXXXXKEVLQGCKIVFSRIFPTKFPGKNHRLWRMAEQLGATCSTE 599
            D+  D ++ +D         K+VL+GCKIVFSR+FPT+F   NH LW+MAEQLGATCS E
Sbjct: 360  DELEDAIDGRDVRQVLSTVRKDVLKGCKIVFSRVFPTQFQADNHHLWKMAEQLGATCSRE 419

Query: 598  LDESITHVVSTDVGTDKSRWAVNQNKFLVHPGWIEACNYFWRKETEEKFPVNQEKIS 428
            +D S+THVVS + GT+KSRWA+  +KFLVHP WIEA NY W+++ EE F VNQ KI+
Sbjct: 420  VDPSVTHVVSAEAGTEKSRWALKNDKFLVHPRWIEATNYMWQRQPEENFSVNQPKIN 476


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 442

 Score =  413 bits (1062), Expect = e-113
 Identities = 223/448 (49%), Positives = 287/448 (64%), Gaps = 16/448 (3%)
 Frame = -2

Query: 1729 MSIAADSLLSYRSSDDFALFLESQLDVASEED--EFEGFNCTNELNDHPRIKRPKLDDSD 1556
            MS+  DS +   SSDDF  FL+++LD +S +   + E     +EL    R KR K +  +
Sbjct: 1    MSVVTDSPVHSSSSDDFIAFLDAELDASSPDSSPDKEVVKQDDELQS-VRTKRRKFESIE 59

Query: 1555 P----------HNSISGESHIENVYPHPGVMGGMCIRCGHIVDSESGVKLSYIHEGMRLA 1406
                         S+   S ++    HPG  G MCIRCG  +D ESGV   YIH+G+RL 
Sbjct: 60   ETEGSTSEGIVKRSLEASSEVDVCCTHPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLH 119

Query: 1405 KYEIARLWSKGLMS----NKXXXXXXXXXXXLNSTRFEDITPEERYLTAPKEALPDAIKG 1238
              EI+RL +  + S     K           LNST    +T EE +L    ++L +  KG
Sbjct: 120  DEEISRLRNTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEELHLLNQTDSLTNVSKG 179

Query: 1237 NSLFHLESIHMMTKLRPYVSEFLSEASRLFEMYIYTMGQRSYANRVAKILDPDNVYFNTR 1058
             SLF LE ++MMTKLRP+V  FL EAS +FEMYIYTMG R YA  +AK+LDP   YFN +
Sbjct: 180  -SLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAK 238

Query: 1057 VIAQEDCTQSHQKGLDVVLGQESCILILDDTEAVWSKHKENLILMERYHFFQSSCKQFGV 878
            VI+++D TQ HQKGLDVVLGQES ++ILDDTE  W KHK+NLILMERYHFF SSC+QFG 
Sbjct: 239  VISRDDGTQKHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGF 298

Query: 877  KCKSLSEKKEDEIEDDGALATILKILQRVHSLYFDQENDLLNQDXXXXXXXXXKEVLQGC 698
             CKSL+E K DE E DGALA ILK+L++VH ++FD++ D  +QD         +EVL GC
Sbjct: 299  NCKSLAELKSDEDETDGALAKILKVLKQVHCMFFDKQEDFDDQDVRQVLSSVRREVLSGC 358

Query: 697  KIVFSRIFPTKFPGKNHRLWRMAEQLGATCSTELDESITHVVSTDVGTDKSRWAVNQNKF 518
             I+FSRI     P     L +MAEQ+GATC TE+D S+THVV+TD GT+K RWAV + KF
Sbjct: 359  VIIFSRIVHGAIPS----LRKMAEQMGATCLTEIDPSVTHVVATDAGTEKCRWAVKEKKF 414

Query: 517  LVHPGWIEACNYFWRKETEEKFPVNQEK 434
            +VHP WIEA NYFW+K+ EE F + +++
Sbjct: 415  VVHPLWIEAANYFWQKQPEENFSLKKKQ 442


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Glycine max]
          Length = 428

 Score =  413 bits (1061), Expect = e-113
 Identities = 225/438 (51%), Positives = 283/438 (64%), Gaps = 6/438 (1%)
 Frame = -2

Query: 1729 MSIAADSLLSYRSSDDFALFLESQLDVASEEDEFEGFNCTNELNDHPR--IKRPKLDDSD 1556
            MS+  DS +   SSDDF  FL+++LD AS  D         + +D     IKR K +  +
Sbjct: 1    MSVVTDSPVHSSSSDDFIAFLDAELD-ASSPDSSPDKEVEKQDDDELESGIKRRKFESIE 59

Query: 1555 PHNSISGESHIENVYPHPGVMGGMCIRCGHIVDSESGVKLSYIHEGMRLAKYEIARLWSK 1376
                    S  E V  HPG  G MCIRCG  +D ESGV   YIH+G+RL   EI+RL + 
Sbjct: 60   ETEG----STSEGVCTHPGSFGNMCIRCGQKLDGESGVTFGYIHKGLRLHDEEISRLRNT 115

Query: 1375 GLMS----NKXXXXXXXXXXXLNSTRFEDITPEERYLTAPKEALPDAIKGNSLFHLESIH 1208
             + S     K           LNST    +T EE +L    ++L D  KG SLF LE ++
Sbjct: 116  DMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESHLLNQTDSLRDVSKG-SLFKLEHMN 174

Query: 1207 MMTKLRPYVSEFLSEASRLFEMYIYTMGQRSYANRVAKILDPDNVYFNTRVIAQEDCTQS 1028
            MMTKLRP+V  FL EAS +FEMYIYTMG R YA  +AK+LDP   YFN +VI+++D TQ 
Sbjct: 175  MMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDDGTQK 234

Query: 1027 HQKGLDVVLGQESCILILDDTEAVWSKHKENLILMERYHFFQSSCKQFGVKCKSLSEKKE 848
            HQKGLDVVLGQES +LILDDTE  W KHK+NLILMERYHFF SSC+QFG  CKSL+E K 
Sbjct: 235  HQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLAELKS 294

Query: 847  DEIEDDGALATILKILQRVHSLYFDQENDLLNQDXXXXXXXXXKEVLQGCKIVFSRIFPT 668
            DE E DGALA ILK+L++VH ++FD++ D  ++D         +EVL GC I+FSRI   
Sbjct: 295  DENETDGALAKILKVLKQVHCMFFDKQEDFDDRDVRQMLSLVRREVLSGCVIIFSRIVHG 354

Query: 667  KFPGKNHRLWRMAEQLGATCSTELDESITHVVSTDVGTDKSRWAVNQNKFLVHPGWIEAC 488
              P     L +MAEQ+GATC TE+D S+THVV+TD GT+K RWAV + KF+VHP WIEA 
Sbjct: 355  AIPS----LRKMAEQMGATCLTEIDPSVTHVVATDAGTEKCRWAVKEKKFVVHPLWIEAA 410

Query: 487  NYFWRKETEEKFPVNQEK 434
            NYFW+K+ EE F + +++
Sbjct: 411  NYFWQKQPEENFILKKKQ 428


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            4-like [Vitis vinifera]
          Length = 278

 Score =  405 bits (1042), Expect = e-110
 Identities = 192/273 (70%), Positives = 228/273 (83%), Gaps = 2/273 (0%)
 Frame = -2

Query: 1246 IKGNSLFHLESIHMMTKLRPYVSEFLSEASRLFEMYIYTMGQRSYANRVAKILDPDNVYF 1067
            +KGN LF L ++HM+TKLRPYV  FL EAS++FEMYIYTMG+RSYA  +AK+LDP+ VYF
Sbjct: 5    LKGN-LFMLNTMHMLTKLRPYVHTFLKEASKMFEMYIYTMGERSYALEMAKLLDPERVYF 63

Query: 1066 NTRVIAQEDCTQSHQKGLDVVLGQESCILILDDTEAVWSKHKENLILMERYHFFQSSCKQ 887
            ++RVI+Q DCTQ HQKGLDVVLGQES +LILDDTE+VW KHK+NLILMERYHFF SSC+Q
Sbjct: 64   SSRVISQADCTQRHQKGLDVVLGQESAVLILDDTESVWQKHKDNLILMERYHFFASSCRQ 123

Query: 886  FGVKCKSLSEKKEDEIEDDGALATILKILQRVHSLYFDQE--NDLLNQDXXXXXXXXXKE 713
            FG  CKSLSE K DE E DGALAT+LK+LQR+HS++FD E  +D   +D         KE
Sbjct: 124  FGFNCKSLSELKSDESEPDGALATVLKVLQRIHSMFFDPELGDDFSGRDVRQVVKRVRKE 183

Query: 712  VLQGCKIVFSRIFPTKFPGKNHRLWRMAEQLGATCSTELDESITHVVSTDVGTDKSRWAV 533
            VL+GCKIVFSR+FPT+F  +NH LWRMAEQLGATC+TELD S+THVVSTD GT+KSRWA+
Sbjct: 184  VLKGCKIVFSRVFPTRFQAENHHLWRMAEQLGATCATELDPSVTHVVSTDAGTEKSRWAL 243

Query: 532  NQNKFLVHPGWIEACNYFWRKETEEKFPVNQEK 434
             + KFLVHPGWIEA NYFW+K+ EE FPVNQ+K
Sbjct: 244  QEKKFLVHPGWIEAANYFWQKQPEENFPVNQKK 276