BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008943
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31382.3| unnamed protein product [Vitis vinifera]              370   e-100
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   370   e-100
ref|XP_002532622.1| Far upstream element-binding protein, putati...   357   4e-96
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   353   5e-95
gb|ABK95306.1| unknown [Populus trichocarpa]                          350   7e-94

>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  370 bits (950), Expect = e-100
 Identities = 201/344 (58%), Positives = 259/344 (75%), Gaps = 6/344 (1%)
 Frame = -2

Query: 1231 SKHKY*ILRSFFQIQTYLYFSSILSLYIYLI--MENGDSIYNSSTENAQNQSPPPVHDD- 1061
            +K+K  +  +  +++ ++      + +++ I  ME+ +S Y SS E    +S PP     
Sbjct: 16   NKYKEAVFTAKLRLRKHIAIDKKRARHLHQISFMESPESAYVSSPEVPPKRSSPPRSPTS 75

Query: 1060 ---DKTTYIKFLLSNAEAGSVIGKGGSTINDFQSQSGARIQLSRNFEFFPGTSDRIVMVS 890
               +K+TYI+FL+SNA AGSVIGKGGSTINDFQSQSGARIQLSRN EFFPGTSDRI+M+S
Sbjct: 76   DFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 135

Query: 889  GNIDDVLKAIDLVLTKVLEEFYVDDGGDSEHRSRVRLVVPNXXXXXXXXXXXXXXKSLIE 710
            G  ++++KA++L+L K+L E + +DG +++ RS+VRL+VPN              KS IE
Sbjct: 136  GATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 195

Query: 709  DSRAAIKISPPENMYPGLRDRLVTLVGAIGEQMRAIELILLKLSEDHNYIQSINAPFPYP 530
            DS+A+IKISP +N Y GL DRLVTL+G++ EQMRAI+LIL KL+ED +Y Q +NAPF Y 
Sbjct: 196  DSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQFMNAPFSY- 254

Query: 529  AAGFNGMNYGLNGVGGKFQNSRPYNKEEAASSVTIGVADEHIGLVVGRGGRSLTEISQVS 350
            AA +N MNYG NG GGKFQN    NKE+ ++SVTIGVADEHIGLVVGRGGR++ +ISQ S
Sbjct: 255  AAAYNSMNYGPNGAGGKFQN----NKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQAS 310

Query: 349  GARIKISDRGDFMSGTSNRKVTISGSQRAISVAEDMITRKVASA 218
            GARIKISDRGDFMSGT++RKVTI+GSQRAI  AE MI +KVASA
Sbjct: 311  GARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASA 354


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  370 bits (949), Expect = e-100
 Identities = 198/311 (63%), Positives = 243/311 (78%), Gaps = 4/311 (1%)
 Frame = -2

Query: 1138 MENGDSIYNSSTENAQNQSPPPVHDD----DKTTYIKFLLSNAEAGSVIGKGGSTINDFQ 971
            ME+ +S Y SS E    +S PP        +K+TYI+FL+SNA AGSVIGKGGSTINDFQ
Sbjct: 1    MESPESAYVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQ 60

Query: 970  SQSGARIQLSRNFEFFPGTSDRIVMVSGNIDDVLKAIDLVLTKVLEEFYVDDGGDSEHRS 791
            SQSGARIQLSRN EFFPGTSDRI+M+SG  ++++KA++L+L K+L E + +DG +++ RS
Sbjct: 61   SQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRS 120

Query: 790  RVRLVVPNXXXXXXXXXXXXXXKSLIEDSRAAIKISPPENMYPGLRDRLVTLVGAIGEQM 611
            +VRL+VPN              KS IEDS+A+IKISP +N Y GL DRLVTL+G++ EQM
Sbjct: 121  KVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQM 180

Query: 610  RAIELILLKLSEDHNYIQSINAPFPYPAAGFNGMNYGLNGVGGKFQNSRPYNKEEAASSV 431
            RAI+LIL KL+ED +Y Q +NAPF Y AA +N MNYG NG GGKFQN    NKE+ ++SV
Sbjct: 181  RAIDLILSKLTEDPHYTQFMNAPFSY-AAAYNSMNYGPNGAGGKFQN----NKEDRSNSV 235

Query: 430  TIGVADEHIGLVVGRGGRSLTEISQVSGARIKISDRGDFMSGTSNRKVTISGSQRAISVA 251
            TIGVADEHIGLVVGRGGR++ +ISQ SGARIKISDRGDFMSGT++RKVTI+GSQRAI  A
Sbjct: 236  TIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 295

Query: 250  EDMITRKVASA 218
            E MI +KVASA
Sbjct: 296  ESMIMQKVASA 306


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  357 bits (916), Expect = 4e-96
 Identities = 192/313 (61%), Positives = 237/313 (75%), Gaps = 6/313 (1%)
 Frame = -2

Query: 1138 MENGDSIYNSSTENA-QNQSPPPVHDD-----DKTTYIKFLLSNAEAGSVIGKGGSTIND 977
            ME+ +S Y SS E   + +SPPP         +K TY++FL+SNA AGSVIGKGG+TI D
Sbjct: 1    MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60

Query: 976  FQSQSGARIQLSRNFEFFPGTSDRIVMVSGNIDDVLKAIDLVLTKVLEEFYVDDGGDSEH 797
            FQSQSGARIQLSRN+EFFPGTSDRI+++SG +DDVLK ++LVL K+L E + +DG D + 
Sbjct: 61   FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDP 120

Query: 796  RSRVRLVVPNXXXXXXXXXXXXXXKSLIEDSRAAIKISPPENMYPGLRDRLVTLVGAIGE 617
            R++VRLVVPN              KS IE+S+A IKISP +N + GL DRLVT+ G + E
Sbjct: 121  RTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEE 180

Query: 616  QMRAIELILLKLSEDHNYIQSINAPFPYPAAGFNGMNYGLNGVGGKFQNSRPYNKEEAAS 437
            QMRAI+LIL KL +D +Y+Q+++APF Y A  +N MNYG NG GGKFQN    NKE+  +
Sbjct: 181  QMRAIDLILSKLYDDPHYVQTMHAPFSY-AVAYNSMNYGANGAGGKFQN----NKEDRTN 235

Query: 436  SVTIGVADEHIGLVVGRGGRSLTEISQVSGARIKISDRGDFMSGTSNRKVTISGSQRAIS 257
            SVTIGVAD HIGLVVGRGGR++ EISQVSGARIKISDRGDFMSGT++RK+ I+GSQRAI 
Sbjct: 236  SVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIR 295

Query: 256  VAEDMITRKVASA 218
             AE MI +KVA A
Sbjct: 296  TAEGMIMQKVAYA 308


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
            gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
            protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  353 bits (907), Expect = 5e-95
 Identities = 195/320 (60%), Positives = 237/320 (74%), Gaps = 13/320 (4%)
 Frame = -2

Query: 1138 MENGDSIYNSSTENAQNQSPPPVHDD-----DKTTYIKFLLSNAEAGSVIGKGGSTINDF 974
            ME+ +S Y SS E    +SPPP         +K TYI+FL+SNA AGSVIGKGGSTINDF
Sbjct: 1    MESTESSYVSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTINDF 60

Query: 973  QSQSGARIQLSRNFEFFPGTSDRIVMVSGNIDDVLKAIDLVLTKVLEEFYVDDGGDSEHR 794
            QSQSGARIQLSRN EFFPGT+DRI+MVSG+I+++LKA++LVL K+L E + ++G D E R
Sbjct: 61   QSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPR 120

Query: 793  SRVRLVVPNXXXXXXXXXXXXXXKSLIEDSRAAIKISPPENMYPGLRDRLVTLVGAIGEQ 614
            ++VRL+VP+              KS IEDS+A IKISP +N Y    DRLVTL G I EQ
Sbjct: 121  TKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQ 180

Query: 613  MRAIELILLKLSEDHNYIQSINAPFPYPAAGFNGMNYGLN--GVGGKFQNSRPYNK---- 452
            MRA +LI+ KLSED +Y QS+N PF YP + FN MNYG N  G GG+FQN++P  +    
Sbjct: 181  MRATDLIVSKLSEDPHYTQSMNYPFSYPTS-FNAMNYGSNGGGTGGRFQNNKPDTRSSEI 239

Query: 451  --EEAASSVTIGVADEHIGLVVGRGGRSLTEISQVSGARIKISDRGDFMSGTSNRKVTIS 278
              EE  +S+TIGV+D HIGLVVGRGGR++ EISQ SGARIKISDRGDFMSGT++RKVTI+
Sbjct: 240  VQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTIT 299

Query: 277  GSQRAISVAEDMITRKVASA 218
            GSQRAI  AE MI +KVA A
Sbjct: 300  GSQRAIRAAESMILQKVAYA 319


>gb|ABK95306.1| unknown [Populus trichocarpa]
          Length = 313

 Score =  350 bits (897), Expect = 7e-94
 Identities = 188/312 (60%), Positives = 233/312 (74%), Gaps = 5/312 (1%)
 Frame = -2

Query: 1138 MENGDSIYNSSTENAQNQSPPPVHDD-----DKTTYIKFLLSNAEAGSVIGKGGSTINDF 974
            ME+ +S Y SS E  + +SPPP         +K TYIK L+SNA AGSVIGKGG+TI DF
Sbjct: 1    MESTESSYVSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITDF 60

Query: 973  QSQSGARIQLSRNFEFFPGTSDRIVMVSGNIDDVLKAIDLVLTKVLEEFYVDDGGDSEHR 794
            QSQSGARIQLS+N+EFFPGTSDRI+++SG IDD LKA++L++ K+L E   +DG D+E R
Sbjct: 61   QSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTEDGDDAEPR 120

Query: 793  SRVRLVVPNXXXXXXXXXXXXXXKSLIEDSRAAIKISPPENMYPGLRDRLVTLVGAIGEQ 614
             RVRLVVPN              KS IE+S A IKISP +  + GL DRLV + G + EQ
Sbjct: 121  MRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEEQ 180

Query: 613  MRAIELILLKLSEDHNYIQSINAPFPYPAAGFNGMNYGLNGVGGKFQNSRPYNKEEAASS 434
            M AI+LIL KL++D +Y+Q+++AP  Y AA +N  N+GLNG G KFQ    +NKE+  +S
Sbjct: 181  MHAIDLILSKLTDDTHYLQNMHAPLSY-AAAYNSTNHGLNGAGVKFQ----HNKEDRTNS 235

Query: 433  VTIGVADEHIGLVVGRGGRSLTEISQVSGARIKISDRGDFMSGTSNRKVTISGSQRAISV 254
            VTIGVADEHIGLVVGRGGR++ EISQ SGARIKISDRGDFMSGT++RK+TI+GSQRAI  
Sbjct: 236  VTIGVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHA 295

Query: 253  AEDMITRKVASA 218
            AEDMI +KV+ A
Sbjct: 296  AEDMIMQKVSYA 307