BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008929
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       516   e-144
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   511   e-142
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           510   e-142
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...   497   e-138
gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]           491   e-136

>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  516 bits (1330), Expect = e-144
 Identities = 248/348 (71%), Positives = 293/348 (84%), Gaps = 12/348 (3%)
 Frame = +2

Query: 158  SEEKRTVWIGDLQQWMDEAYLRTCFDNAGEVLNVKIIRNKQTGQSDRYGFVEFSSHAAAD 337
            SE+ +T+WIGDLQQWMDE+YL +CF  AGEV++VKIIRNKQTGQS+RYGFVEF++HAAA+
Sbjct: 134  SEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAE 193

Query: 338  KILQSYNGATMPNAEQSFRLNWATFSTGDRRADSGYDLSIFVGDLASDVTDALLHETFAS 517
            K+LQSYNG  MPNAEQ FRLNWA FSTG++RA++G D SIFVGDLASDVTD +L +TFAS
Sbjct: 194  KVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFAS 253

Query: 518  RYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAMRVGVATPKKP 697
            RY S+KGAKVVVD NTGHSKGYGFVRF DE+E+SRAMTEMNGV CS+RAMR+GVATPKKP
Sbjct: 254  RYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKP 313

Query: 698  MTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDEELRQSFIEFG 877
              QQQ+ SQAV L+GGY  NGA   G QSDGD+SNTTIFVGGLDS+VTDEELRQSF +FG
Sbjct: 314  SAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFG 373

Query: 878  EIISVKIPVGKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRLSWGRTPGSK-------- 1033
            E++SVKIP GKGCGFVQF+DRSSA++AI KL+G++IGKQ VRLSWGR+P +K        
Sbjct: 374  EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRADSGS 433

Query: 1034 QWNGAYYGRQGHGGY----PRSHNPNMYPAAASNGAPSNGYGSYQQPV 1165
            QWNG Y GRQ +GGY     ++ +  MY   A+ GA SNGYG++QQPV
Sbjct: 434  QWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNGYGNHQQPV 481


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  511 bits (1316), Expect = e-142
 Identities = 246/348 (70%), Positives = 290/348 (83%), Gaps = 12/348 (3%)
 Frame = +2

Query: 158  SEEKRTVWIGDLQQWMDEAYLRTCFDNAGEVLNVKIIRNKQTGQSDRYGFVEFSSHAAAD 337
            SE+ +T+WIGDLQQWMDE+YL +CF  AGEV++VKIIRNKQTGQS+RYGFVEF++HAAA+
Sbjct: 80   SEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAE 139

Query: 338  KILQSYNGATMPNAEQSFRLNWATFSTGDRRADSGYDLSIFVGDLASDVTDALLHETFAS 517
            K+LQSYNG  MPN EQ FRLNWA FSTG++RA++G D SIFVGDLASDVTD +L +TFAS
Sbjct: 140  KVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFAS 199

Query: 518  RYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAMRVGVATPKKP 697
            RY S+KGAKVVVD NTGHSKGYGFVRF DE+E+SRAMTEMNGV CS+RAMR+GVATPKKP
Sbjct: 200  RYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKP 259

Query: 698  MTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDEELRQSFIEFG 877
               +Q+ SQAV L+GGY  NGA   G QSDGDSSNTTIFVGGLDSEVTDEELRQSF +FG
Sbjct: 260  SAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFG 319

Query: 878  EIISVKIPVGKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRLSWGRTPGSK-------- 1033
            E++SVKIP GKGCGFVQF+DRSSA++AI KL+G++IGKQ VRLSWGR+P +K        
Sbjct: 320  EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGS 379

Query: 1034 QWNGAYYGRQGHGGY----PRSHNPNMYPAAASNGAPSNGYGSYQQPV 1165
            QWNG Y GRQ +GGY     ++ +  MY   A+ GA SN YG++QQPV
Sbjct: 380  QWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQPV 427



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 75/291 (25%), Positives = 122/291 (41%), Gaps = 10/291 (3%)
 Frame = +2

Query: 308  VEFSSHAAADKILQSYNGATMPNAEQSFRLNWATFSTGDRRADSGYDLSIFVGDLASDVT 487
            +++ + A A +    Y    MP  +Q  +      S    ++ S  + +I++GDL   + 
Sbjct: 37   MQYPAAAMAMQQQMMYGQQYMPYYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMD 96

Query: 488  DALLHETFASRYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAM 667
            ++ LH  F S+   V   K++ +  TG S+ YGFV F+      + +   NG +      
Sbjct: 97   ESYLHSCF-SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTM------ 149

Query: 668  RVGVATPKKPMTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDE 847
                     P T+Q F    +  AG          G +     S+ +IFVG L S+VTD 
Sbjct: 150  --------MPNTEQPF---RLNWAG-------FSTGEKRAETGSDFSIFVGDLASDVTDT 191

Query: 848  ELRQSFI-EFGEIISVKIPV------GKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRL 1006
             LR +F   +  +   K+ V       KG GFV+F D S    A+ ++NG     + +R+
Sbjct: 192  MLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRI 251

Query: 1007 SWGRTPGSKQWNGAYYGRQG---HGGYPRSHNPNMYPAAASNGAPSNGYGS 1150
              G     K      Y  Q     GGY  +        AA++G+ S+G  S
Sbjct: 252  --GVATPKKPSAHEQYSSQAVILSGGYASN-------GAATHGSQSDGDSS 293


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  510 bits (1314), Expect = e-142
 Identities = 248/348 (71%), Positives = 292/348 (83%), Gaps = 12/348 (3%)
 Frame = +2

Query: 158  SEEKRTVWIGDLQQWMDEAYLRTCFDNAGEVLNVKIIRNKQTGQSDRYGFVEFSSHAAAD 337
            SE+ +T+WIGDLQQWMDE+YL +CF  AGEV++VKIIRNKQTGQS+RYGFVEF++HAAA+
Sbjct: 80   SEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAE 139

Query: 338  KILQSYNGATMPNAEQSFRLNWATFSTGDRRADSGYDLSIFVGDLASDVTDALLHETFAS 517
            K+LQSYNG  MPNAEQ FRLNWA FSTG++RA++G D SIFVGDLASDVTD +L +TFAS
Sbjct: 140  KVLQSYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFAS 199

Query: 518  RYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAMRVGVATPKKP 697
            RY S+KGAKVVVD NTGHSKGYGFVRF DE+E+SRAMTEMNGV CS+RAMR+GVATPKKP
Sbjct: 200  RYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKP 259

Query: 698  MTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDEELRQSFIEFG 877
              QQQ+ SQAV L+GGY  NGA   G QSDGD+SNTTIFVGGLDS+VTDEELRQSF +FG
Sbjct: 260  SAQQQYSSQAVILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQFG 319

Query: 878  EIISVKIPVGKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRLSWGRTPGSK-------Q 1036
            E++SVKIP GKGCGFVQF+DRSSA++AI KL+G++IGKQ VRLSWGRT   +       Q
Sbjct: 320  EVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRTANKQMRADSGSQ 379

Query: 1037 WNGAYYGRQGHGGY----PRSHNPNMY-PAAASNGAPSNGYGSYQQPV 1165
            WNG Y GRQ +GGY     ++ +  MY   AA+ GA SNGYG++QQPV
Sbjct: 380  WNGGYNGRQNYGGYGYGASQNQDSGMYATGAAAYGASSNGYGNHQQPV 427


>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
            DNA-binding protein [Solanum lycopersicum]
          Length = 428

 Score =  497 bits (1279), Expect = e-138
 Identities = 242/353 (68%), Positives = 286/353 (81%), Gaps = 17/353 (4%)
 Frame = +2

Query: 158  SEEKRTVWIGDLQQWMDEAYLRTCFDNAGEVLNVKIIRNKQTGQSDRYGFVEFSSHAAAD 337
            SE+ RT+WIGDLQQWMDE YL TCF  AGEV++VK+IRNKQTGQS+RYGF+EF++H AA+
Sbjct: 75   SEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAE 134

Query: 338  KILQSYNGATMPNAEQSFRLNWATFSTGDRRAD------SGYDLSIFVGDLASDVTDALL 499
            K+LQSYNG  MPNAEQ FRLNW+ FS+G++RAD      SG DLSIFVGDLASDVTD +L
Sbjct: 135  KVLQSYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTML 194

Query: 500  HETFASRYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAMRVGV 679
             +TF+SRY SVKGAKVV+D+NTG SKGYGFVRF DE+E+SRAMTEMNG+ CS+RAMR+GV
Sbjct: 195  RDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGV 254

Query: 680  ATPKKPMTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDEELRQ 859
            ATPKKP   QQ+  QAV LAGG+  NGA  Q  Q+D D SNTT+FVGGLDSEVTDEELRQ
Sbjct: 255  ATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQ 314

Query: 860  SFIEFGEIISVKIPVGKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRLSWGRTPGSK-- 1033
            SF +FG ++SVKIP GKGCGFVQF++RS+AEDAI KLNG+VIG QTVRLSWGR P +K  
Sbjct: 315  SFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNPANKQF 374

Query: 1034 ------QWNGAYYGRQGHGGY---PRSHNPNMYPAAASNGAPSNGYGSYQQPV 1165
                  QWNG YYGRQ +GGY         +MY A A++GA SNGYG+++Q V
Sbjct: 375  RTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHGASSNGYGNHEQSV 427


>gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
          Length = 423

 Score =  491 bits (1264), Expect = e-136
 Identities = 240/354 (67%), Positives = 284/354 (80%), Gaps = 17/354 (4%)
 Frame = +2

Query: 155  GSEEKRTVWIGDLQQWMDEAYLRTCFDNAGEVLNVKIIRNKQTGQSDRYGFVEFSSHAAA 334
            GSE+ RT+WIGDLQQWMDE YL TCF  AGEV++VK+IRNKQTGQS+RYGF+EF++H AA
Sbjct: 74   GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133

Query: 335  DKILQSYNGATMPNAEQSFRLNWATFSTGDRRAD------SGYDLSIFVGDLASDVTDAL 496
            +K+LQSYNG  MPNAEQ FRLNW+ FSTG++RAD      SG DLSIFVGDLASDVTD +
Sbjct: 134  EKVLQSYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTM 193

Query: 497  LHETFASRYSSVKGAKVVVDTNTGHSKGYGFVRFSDENEKSRAMTEMNGVICSNRAMRVG 676
            L +TF+SRY SVKGAKVV+D+NTG SKGYGFVRF DE+E+SRAMTEMNG+ CS+RAMR+G
Sbjct: 194  LRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIG 253

Query: 677  VATPKKPMTQQQFGSQAVTLAGGYVPNGAMPQGPQSDGDSSNTTIFVGGLDSEVTDEELR 856
            VATPKKP   QQ+ SQ     GG+  NGA  Q  Q+D D SNTT+FVGGLDS+VTDEELR
Sbjct: 254  VATPKKPSAMQQYSSQ-----GGHASNGAATQTSQTDSDLSNTTVFVGGLDSDVTDEELR 308

Query: 857  QSFIEFGEIISVKIPVGKGCGFVQFADRSSAEDAIGKLNGSVIGKQTVRLSWGRTPGSK- 1033
            QSF +FG ++SVKIP GKGCGFVQF++RS+AEDAI KLNG+VIG QTVRLSWGR P +K 
Sbjct: 309  QSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNPANKQ 368

Query: 1034 -------QWNGAYYGRQGHGGY---PRSHNPNMYPAAASNGAPSNGYGSYQQPV 1165
                   QWNG YYGRQ +GGY         +MY A A++GA SNGYG+++Q V
Sbjct: 369  FRTDSGSQWNGGYYGRQNYGGYGYGASQSQDSMYGAGAAHGASSNGYGNHEQSV 422