BLASTX nr result

ID: Lithospermum22_contig00008917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008917
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium dist...    88   6e-16
gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indi...    87   1e-15
dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica G...    87   1e-15
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g...    87   1e-15
ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15

>ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
          Length = 153

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +1

Query: 70  SSFTFNLPQSQTPPPPKADPSDNLFVSGLSKRTTSEGLHEAFAKFGEIVHARVVTDRVS 246
           S+FT   P S   PPPKADPS NLFVSGLSKRTT++GL EAFAKFGE++HARVVTDRV+
Sbjct: 30  SAFT---PPSPPTPPPKADPSPNLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVT 85


>gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
          Length = 141

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +1

Query: 55  FSSVSSSFTFNLPQSQTPPPPKADPSDNLFVSGLSKRTTSEGLHEAFAKFGEIVHARVVT 234
           F  + S   F+ P+  TPPP KADPS NLF+SGLSKRTT++GL EAFAKFGE++HARVVT
Sbjct: 11  FRRMFSISAFSPPKPPTPPP-KADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVT 69

Query: 235 DRVS 246
           DRV+
Sbjct: 70  DRVT 73


>dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 111

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +1

Query: 55  FSSVSSSFTFNLPQSQTPPPPKADPSDNLFVSGLSKRTTSEGLHEAFAKFGEIVHARVVT 234
           F  + S   F+ P+  TPPP KADPS NLF+SGLSKRTT++GL EAFAKFGE++HARVVT
Sbjct: 11  FRRMFSISAFSPPKPPTPPP-KADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVT 69

Query: 235 DRVS 246
           DRV+
Sbjct: 70  DRVT 73


>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
           gi|38636774|dbj|BAD03017.1| putative RNA recognition
           motif (RRM)-containing protein [Oryza sativa Japonica
           Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
           sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639884|gb|EEE68016.1| hypothetical protein
           OsJ_25986 [Oryza sativa Japonica Group]
          Length = 141

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 52/64 (81%)
 Frame = +1

Query: 55  FSSVSSSFTFNLPQSQTPPPPKADPSDNLFVSGLSKRTTSEGLHEAFAKFGEIVHARVVT 234
           F  + S   F+ P+  TPPP KADPS NLF+SGLSKRTT++GL EAFAKFGE++HARVVT
Sbjct: 11  FRRMFSISAFSPPKPPTPPP-KADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVT 69

Query: 235 DRVS 246
           DRV+
Sbjct: 70  DRVT 73


>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +1

Query: 58  SSVSSSFTFNLPQSQTPPPPKADPSDNLFVSGLSKRTTSEGLHEAFAKFGEIVHARVVTD 237
           S+ SSSF F     QTP   +A+P+ NLFVSGLSKRTTSEGL EAF+KFGE+V ARVVTD
Sbjct: 30  STSSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTD 89

Query: 238 RVS 246
           RVS
Sbjct: 90  RVS 92


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