BLASTX nr result

ID: Lithospermum22_contig00008876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008876
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254...   387   e-105
ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago...   381   e-103
ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220...   378   e-102
ref|NP_563883.1| RING/FYVE/PHD zinc finger-containing protein [A...   376   e-102
ref|XP_002889844.1| zinc finger family protein [Arabidopsis lyra...   376   e-102

>ref|XP_002281763.2| PREDICTED: uncharacterized protein LOC100254401 [Vitis vinifera]
          Length = 304

 Score =  387 bits (993), Expect = e-105
 Identities = 177/242 (73%), Positives = 193/242 (79%)
 Frame = +1

Query: 1   DAENDDELIAPCMCKGTQQFVHRSCLDHWRSVKEGFSFSHCTTCKAQFHLRIAEIEDNSW 180
           D E DDELI+PCMCKGTQQFVHRSCLDHWRSVKEGF+FSHCTTCKAQ+HL++A  EDNSW
Sbjct: 56  DGEPDDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQYHLQVALFEDNSW 115

Query: 181 RKVKFRLFVARDVFLVFLAVQTVIAVMAVMAYLMDKDGSFRNSFNDSWDRILSKHPVPFY 360
           RK+KFRLFVARDVFLVFLAVQTVI  M   AY+MDKDG+FRNSF+D WDRILS+HP+PFY
Sbjct: 116 RKIKFRLFVARDVFLVFLAVQTVIGAMGGFAYIMDKDGAFRNSFSDGWDRILSRHPIPFY 175

Query: 361 YCXXXXXXXXXXXXXXXXXHCSALNGNDPRVAGCQNCCYGWGILDCFPASLEXXXXXXXX 540
           YC                 HCS+LN NDP +AGCQNCCYGWGILDCFPAS+E        
Sbjct: 176 YCIGVLAFFVLLGFFGLILHCSSLNSNDPHMAGCQNCCYGWGILDCFPASMEACFALVIV 235

Query: 541 XXXXXXXXXXXYGFLAATMALQRIWQRHYHILTKRELTQEYIVEDLRGSYTPPKLDPEHE 720
                      YGFLAATMA+QRIWQRHYHILTKRELT+EYIVEDLRG YTPPKLDPEHE
Sbjct: 236 FVVIFAILGVAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLRGCYTPPKLDPEHE 295

Query: 721 ER 726
           ER
Sbjct: 296 ER 297


>ref|XP_003609239.1| E3 ubiquitin-protein ligase MARCH3 [Medicago truncatula]
           gi|355510294|gb|AES91436.1| E3 ubiquitin-protein ligase
           MARCH3 [Medicago truncatula]
          Length = 312

 Score =  381 bits (979), Expect = e-103
 Identities = 173/242 (71%), Positives = 194/242 (80%)
 Frame = +1

Query: 1   DAENDDELIAPCMCKGTQQFVHRSCLDHWRSVKEGFSFSHCTTCKAQFHLRIAEIEDNSW 180
           D++ +DELI+PCMCKGTQQFVHRSCLDHWRSVKEGF+FSHCTTCKAQFHLR+   EDNSW
Sbjct: 64  DSDPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVETYEDNSW 123

Query: 181 RKVKFRLFVARDVFLVFLAVQTVIAVMAVMAYLMDKDGSFRNSFNDSWDRILSKHPVPFY 360
           RK+KFRLFVARDVFLVFLAVQTVIA +   AY+MDKDG+FRNSF+D WDRILS+HP+PFY
Sbjct: 124 RKIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGNFRNSFDDGWDRILSRHPIPFY 183

Query: 361 YCXXXXXXXXXXXXXXXXXHCSALNGNDPRVAGCQNCCYGWGILDCFPASLEXXXXXXXX 540
           YC                 HCS+LN NDPR+AGCQNCCYGWGILDCFPAS+E        
Sbjct: 184 YCIGVVAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALVVV 243

Query: 541 XXXXXXXXXXXYGFLAATMALQRIWQRHYHILTKRELTQEYIVEDLRGSYTPPKLDPEHE 720
                      YGFLA+TMA+QRIWQRHYHILTKRELT+EYIVEDL+GSY PPK+DPEHE
Sbjct: 244 FVVIFAILGVAYGFLASTMAIQRIWQRHYHILTKRELTKEYIVEDLQGSYFPPKIDPEHE 303

Query: 721 ER 726
            R
Sbjct: 304 SR 305


>ref|XP_004149889.1| PREDICTED: uncharacterized protein LOC101220313 [Cucumis sativus]
           gi|449533550|ref|XP_004173737.1| PREDICTED:
           uncharacterized LOC101220313 [Cucumis sativus]
          Length = 305

 Score =  378 bits (971), Expect = e-102
 Identities = 172/241 (71%), Positives = 192/241 (79%)
 Frame = +1

Query: 1   DAENDDELIAPCMCKGTQQFVHRSCLDHWRSVKEGFSFSHCTTCKAQFHLRIAEIEDNSW 180
           DAE +DELI+PCMCKGTQQFVHRSCLDHWRSVKEGF+FSHCTTCKAQFHL+++  EDNSW
Sbjct: 57  DAEPEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSW 116

Query: 181 RKVKFRLFVARDVFLVFLAVQTVIAVMAVMAYLMDKDGSFRNSFNDSWDRILSKHPVPFY 360
           RKVKFRLFVARDV LVF+AVQT+IA +   AY+MDKDG+FRNSF+D WDRILSKHP+PFY
Sbjct: 117 RKVKFRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFY 176

Query: 361 YCXXXXXXXXXXXXXXXXXHCSALNGNDPRVAGCQNCCYGWGILDCFPASLEXXXXXXXX 540
           YC                 HCS+LN NDPRVAGC NCCYGWGILDCFPAS+E        
Sbjct: 177 YCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIV 236

Query: 541 XXXXXXXXXXXYGFLAATMALQRIWQRHYHILTKRELTQEYIVEDLRGSYTPPKLDPEHE 720
                      YGFLAATMA+QRIWQRHYHILTKRELT+EY+VEDL G YTPPKL+PEHE
Sbjct: 237 FVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHE 296

Query: 721 E 723
           +
Sbjct: 297 Q 297


>ref|NP_563883.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|26449897|dbj|BAC42070.1| unknown protein [Arabidopsis
           thaliana] gi|28827244|gb|AAO50466.1| unknown protein
           [Arabidopsis thaliana] gi|51971114|dbj|BAD44249.1|
           unknown protein [Arabidopsis thaliana]
           gi|332190554|gb|AEE28675.1| RING/FYVE/PHD zinc
           finger-containing protein [Arabidopsis thaliana]
          Length = 321

 Score =  376 bits (966), Expect = e-102
 Identities = 179/239 (74%), Positives = 189/239 (79%), Gaps = 2/239 (0%)
 Frame = +1

Query: 16  DELIAPCMCKGTQQFVHRSCLDHWRSVKEGFSFSHCTTCKAQFHLRIAEIEDN-SWR-KV 189
           DELI+PCMCKGTQQFVHRSCLDHWRSVKEGF+FSHCTTCKAQFHLR+   EDN SWR K 
Sbjct: 76  DELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEPFEDNNSWRRKA 135

Query: 190 KFRLFVARDVFLVFLAVQTVIAVMAVMAYLMDKDGSFRNSFNDSWDRILSKHPVPFYYCX 369
           KFRLFVARDV LVFLAVQTVIAVMA  AY+MDKDG FRNSFND WDRILSKHP+PFYYC 
Sbjct: 136 KFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHPIPFYYCI 195

Query: 370 XXXXXXXXXXXXXXXXHCSALNGNDPRVAGCQNCCYGWGILDCFPASLEXXXXXXXXXXX 549
                           HCSALNGNDPR+AGCQNCCYGWG+LDCFPAS+E           
Sbjct: 196 GVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASMEACFALVVVFVV 255

Query: 550 XXXXXXXXYGFLAATMALQRIWQRHYHILTKRELTQEYIVEDLRGSYTPPKLDPEHEER 726
                   YGFLAATMA+QRIWQRHYHILTKRELT+EYIVEDL GSYTPPKLD EHE R
Sbjct: 256 IFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYTPPKLDAEHEGR 314


>ref|XP_002889844.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335686|gb|EFH66103.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 323

 Score =  376 bits (965), Expect = e-102
 Identities = 178/239 (74%), Positives = 190/239 (79%), Gaps = 2/239 (0%)
 Frame = +1

Query: 16  DELIAPCMCKGTQQFVHRSCLDHWRSVKEGFSFSHCTTCKAQFHLRIAEIEDN-SWR-KV 189
           DELI+PCMCKGTQQFVHRSCLDHWRSVKEGF+FSHCTTCKAQFHLR+   EDN SWR K 
Sbjct: 78  DELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEPFEDNNSWRRKA 137

Query: 190 KFRLFVARDVFLVFLAVQTVIAVMAVMAYLMDKDGSFRNSFNDSWDRILSKHPVPFYYCX 369
           KFRLFVARDV LVFLAVQTVIAVMA +AY+MDKDG FRNSFND WDRILSKHP+PFYYC 
Sbjct: 138 KFRLFVARDVLLVFLAVQTVIAVMAGLAYMMDKDGEFRNSFNDDWDRILSKHPIPFYYCI 197

Query: 370 XXXXXXXXXXXXXXXXHCSALNGNDPRVAGCQNCCYGWGILDCFPASLEXXXXXXXXXXX 549
                           HCSALNGNDPR+AGCQNCCYGWG+LDCFPAS+E           
Sbjct: 198 GVVSFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASMEACFALVVVFVV 257

Query: 550 XXXXXXXXYGFLAATMALQRIWQRHYHILTKRELTQEYIVEDLRGSYTPPKLDPEHEER 726
                   YGFLAATMA+QRIWQRHYHILTKRELT+EYIVEDL G+YTPPKLD EHE R
Sbjct: 258 IFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGNYTPPKLDAEHEGR 316


Top