BLASTX nr result

ID: Lithospermum22_contig00008793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008793
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159067.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar GT...   108   5e-22
ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-l...   108   5e-22
ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-l...   108   6e-22
emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]   108   6e-22
ref|XP_003543249.1| PREDICTED: nucleolar GTP-binding protein 2-l...   105   3e-21

>ref|XP_004159067.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar GTP-binding protein
           2-like [Cucumis sativus]
          Length = 557

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/86 (66%), Positives = 61/86 (70%)
 Frame = +2

Query: 116 MGKKKERSVNVSGKPKHSLDVNRDXXXXXXXXXXXXXXASNDGKRTAATVRRLKMYNTRP 295
           M KKKE+ VNVSGKPKHSLDVNR                 N   RTAATVRRLKMYNTRP
Sbjct: 1   MAKKKEKKVNVSGKPKHSLDVNRSNE-------------KNKNGRTAATVRRLKMYNTRP 47

Query: 296 KRDNKGHILKHDLQSSELPSTRIQPD 373
           KRD KG +LK+DLQS+ELP TRIQPD
Sbjct: 48  KRDRKGKVLKNDLQSNELPDTRIQPD 73


>ref|XP_004142347.1| PREDICTED: nucleolar GTP-binding protein 2-like [Cucumis sativus]
          Length = 557

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/86 (66%), Positives = 61/86 (70%)
 Frame = +2

Query: 116 MGKKKERSVNVSGKPKHSLDVNRDXXXXXXXXXXXXXXASNDGKRTAATVRRLKMYNTRP 295
           M KKKE+ VNVSGKPKHSLDVNR                 N   RTAATVRRLKMYNTRP
Sbjct: 1   MAKKKEKKVNVSGKPKHSLDVNRSNE-------------KNKNGRTAATVRRLKMYNTRP 47

Query: 296 KRDNKGHILKHDLQSSELPSTRIQPD 373
           KRD KG +LK+DLQS+ELP TRIQPD
Sbjct: 48  KRDRKGKVLKNDLQSNELPDTRIQPD 73


>ref|XP_002284849.1| PREDICTED: nucleolar GTP-binding protein 2-like [Vitis vinifera]
          Length = 530

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/86 (68%), Positives = 62/86 (72%)
 Frame = +2

Query: 116 MGKKKERSVNVSGKPKHSLDVNRDXXXXXXXXXXXXXXASNDGKRTAATVRRLKMYNTRP 295
           M KKKER VNVSGKPKHSLDVNR                  +G R+AATVRRLKMYNTRP
Sbjct: 1   MAKKKERKVNVSGKPKHSLDVNRGN-------------GDKEG-RSAATVRRLKMYNTRP 46

Query: 296 KRDNKGHILKHDLQSSELPSTRIQPD 373
           KRD KG ILKH+LQS ELPSTRIQPD
Sbjct: 47  KRDRKGKILKHELQSKELPSTRIQPD 72


>emb|CAN68109.1| hypothetical protein VITISV_000763 [Vitis vinifera]
          Length = 530

 Score =  108 bits (269), Expect = 6e-22
 Identities = 59/86 (68%), Positives = 62/86 (72%)
 Frame = +2

Query: 116 MGKKKERSVNVSGKPKHSLDVNRDXXXXXXXXXXXXXXASNDGKRTAATVRRLKMYNTRP 295
           M KKKER VNVSGKPKHSLDVNR                  +G R+AATVRRLKMYNTRP
Sbjct: 1   MAKKKERKVNVSGKPKHSLDVNRGN-------------GDKEG-RSAATVRRLKMYNTRP 46

Query: 296 KRDNKGHILKHDLQSSELPSTRIQPD 373
           KRD KG ILKH+LQS ELPSTRIQPD
Sbjct: 47  KRDRKGKILKHELQSKELPSTRIQPD 72


>ref|XP_003543249.1| PREDICTED: nucleolar GTP-binding protein 2-like [Glycine max]
          Length = 549

 Score =  105 bits (263), Expect = 3e-21
 Identities = 58/89 (65%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = +2

Query: 116 MGKKKERSVNVSGKPKHSLDVNRDXXXXXXXXXXXXXXASNDGK---RTAATVRRLKMYN 286
           M KKKE+ VNVSGKPKHSLDVNR                SND K   R+AATVRRLKMYN
Sbjct: 1   MAKKKEKKVNVSGKPKHSLDVNR----------------SNDAKKESRSAATVRRLKMYN 44

Query: 287 TRPKRDNKGHILKHDLQSSELPSTRIQPD 373
           TRP RD KG +L H+LQS ELPSTRIQPD
Sbjct: 45  TRPVRDRKGKVLSHELQSKELPSTRIQPD 73


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