BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008614
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   379   e-147
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   364   e-145
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab...   374   e-144
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   362   e-144
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              362   e-144

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 622

 Score =  379 bits (974), Expect(2) = e-147
 Identities = 189/267 (70%), Positives = 223/267 (83%)
 Frame = -1

Query: 1421 GTQIQATMFNEAAKKFLDKFQLWKVYYISKGSLRVANKQFKTVQNDYEMNLNENSVVEEA 1242
            GTQIQATMFNEAA+KF DKFQL KVYYISKGSL+VANKQF+TVQNDYEMNLNENS VEEA
Sbjct: 223  GTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQVEEA 282

Query: 1241 DDEASFVPEIKYNFVPIDELGPYVNGRELIDIIGVVQHVSPTVSIRRKIDNEMIPKRDIX 1062
             DEA+F+PE K+NFVPID+LGPYV+  EL+D+IGVVQ VSPT+SIRRK +N+++PKRDI 
Sbjct: 283  SDEAAFIPETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDIT 342

Query: 1061 XXXXXXXXXXVSLWNDLATNSAHELLDMVDQSPIVAIKSLKVSDFQGISLSTLSRSSLVI 882
                      VSLWNDLAT+   ELLDM D+SP+VAIK+LKV DFQG+SLSTL RS + +
Sbjct: 343  IADETKKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGDFQGVSLSTLGRSIIQV 402

Query: 881  NPDLPEAKKLMTWYNSEGKDTSLSSVGSGLANSIKGGSQLGFTDRVFISHIINNPSLGDD 702
            NPD PE+KKL +W++SEGK+TSL+SVG+GL+ S K G    ++DRV ISHI +NPSLG D
Sbjct: 403  NPDTPESKKLKSWFDSEGKETSLASVGAGLSPSTKSGGGSMYSDRVSISHITSNPSLGSD 462

Query: 701  GKPAFFNIEAYISFTKLDQSMWYRACK 621
             KPAFF+I AYISF K DQSMWYRACK
Sbjct: 463  -KPAFFSIRAYISFIKPDQSMWYRACK 488



 Score =  171 bits (434), Expect(2) = e-147
 Identities = 76/127 (59%), Positives = 102/127 (80%)
 Frame = -3

Query: 624 QAVGSGYFCEACEKTDEECCLRYIVSLKVSDASGEAWIFVFNDQAEKIIGCSADDLDKLK 445
           +A+G GY+CE C+K D EC LRYI+ +KVSDASGE W+  FN++ E+IIGCSAD+LDKLK
Sbjct: 496 EAIGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVSAFNNEGERIIGCSADELDKLK 555

Query: 444 SQEGESAFQMKLKEVTWVLHLFRISVMPHEYNGEKRQRITARVVGPIDYAAQAKYMLEGL 265
           SQE  +++++KLKE TW  HLFR+SV  +EYN EKRQRIT R V P+D+AA+++++LE +
Sbjct: 556 SQEDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKRQRITVRAVAPLDFAAESRFLLEEI 615

Query: 264 LKAKVSQ 244
            K K SQ
Sbjct: 616 SKIKGSQ 622


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  364 bits (935), Expect(2) = e-145
 Identities = 182/267 (68%), Positives = 224/267 (83%)
 Frame = -1

Query: 1421 GTQIQATMFNEAAKKFLDKFQLWKVYYISKGSLRVANKQFKTVQNDYEMNLNENSVVEEA 1242
            GT+IQATMFN+AA+KF DKF+L KVYYISKG+LRVANKQFKTVQNDYEM LNENS VEEA
Sbjct: 204  GTEIQATMFNQAARKFYDKFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSEVEEA 263

Query: 1241 DDEASFVPEIKYNFVPIDELGPYVNGRELIDIIGVVQHVSPTVSIRRKIDNEMIPKRDIX 1062
             +EA+FVPE K+NFV IDELG YVNGREL+D+IGVVQ+VS T+SIRRK +NEMIPKRDI 
Sbjct: 264  INEAAFVPETKFNFVAIDELGSYVNGRELVDVIGVVQNVSSTMSIRRKSNNEMIPKRDIT 323

Query: 1061 XXXXXXXXXXVSLWNDLATNSAHELLDMVDQSPIVAIKSLKVSDFQGISLSTLSRSSLVI 882
                      VSLW+DLATN   ELLDM D+SP+VAI+S+KV DFQG+SLS ++RS++++
Sbjct: 324  IADETKKTVVVSLWSDLATNVGQELLDMADKSPVVAIRSVKVGDFQGLSLSAITRSTVLV 383

Query: 881  NPDLPEAKKLMTWYNSEGKDTSLSSVGSGLANSIKGGSQLGFTDRVFISHIINNPSLGDD 702
            NPD+PEAKKL +WY+ EGK+TSL+SVGSGL++S KG     ++DRV + HI +NP+LG+D
Sbjct: 384  NPDMPEAKKLRSWYDCEGKETSLTSVGSGLSSSAKGVLWSMYSDRVSLLHITSNPNLGED 443

Query: 701  GKPAFFNIEAYISFTKLDQSMWYRACK 621
             KP FF+I+A ISF K +Q+MWYRACK
Sbjct: 444  -KPVFFSIKANISFIKPEQAMWYRACK 469



 Score =  179 bits (454), Expect(2) = e-145
 Identities = 80/126 (63%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
 Frame = -3

Query: 624 QAVGSGYFCEACEKTDEECCLRYIVSLKVSDASGEAWIFVFNDQAEKIIGCSADDLDKLK 445
           +A+GSGY+CE C+K D +C LRYIV+++VSD SGEAW+ VFN+QAEKIIGCSAD+LD+L+
Sbjct: 477 EAIGSGYWCEGCQKNDTDCSLRYIVAMRVSDTSGEAWLSVFNEQAEKIIGCSADELDRLR 536

Query: 444 SQEGE-SAFQMKLKEVTWVLHLFRISVMPHEYNGEKRQRITARVVGPIDYAAQAKYMLEG 268
           SQ+G+ SA+QMKLKE TWV +LFR+SV P EYN EKRQRIT R   P+D+AA+++Y LE 
Sbjct: 537 SQDGDSSAYQMKLKEATWVPYLFRVSVTPQEYNNEKRQRITVRAAAPVDFAAESRYFLEE 596

Query: 267 LLKAKV 250
           + K  +
Sbjct: 597 MAKMNI 602


>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
            lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
            ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score =  374 bits (960), Expect(2) = e-144
 Identities = 184/267 (68%), Positives = 222/267 (83%)
 Frame = -1

Query: 1421 GTQIQATMFNEAAKKFLDKFQLWKVYYISKGSLRVANKQFKTVQNDYEMNLNENSVVEEA 1242
            GTQIQATMFN AA+KF D+F++ KVYYIS+GSL++ANKQFKTVQNDYEM LNENS VEEA
Sbjct: 204  GTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEA 263

Query: 1241 DDEASFVPEIKYNFVPIDELGPYVNGRELIDIIGVVQHVSPTVSIRRKIDNEMIPKRDIX 1062
             +E  F PEIK+NFVPIDELG YVN ++LID+IGVVQ VSPT+SIRRK DNEMIPKRDI 
Sbjct: 264  SNEEMFTPEIKFNFVPIDELGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIPKRDIT 323

Query: 1061 XXXXXXXXXXVSLWNDLATNSAHELLDMVDQSPIVAIKSLKVSDFQGISLSTLSRSSLVI 882
                      VSLWNDLAT    ELLDM D  P++AIKSLKV DFQG+SLST+SRS++VI
Sbjct: 324  LADESKNTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTISRSNVVI 383

Query: 881  NPDLPEAKKLMTWYNSEGKDTSLSSVGSGLANSIKGGSQLGFTDRVFISHIINNPSLGDD 702
            NPD PEAKKL +WY++EGK+TS+S++GSG+++S   GS+  ++DRVF+SHI +NPSLG++
Sbjct: 384  NPDSPEAKKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEE 443

Query: 701  GKPAFFNIEAYISFTKLDQSMWYRACK 621
             KP FF+I AYISF K DQ+MWYRACK
Sbjct: 444  -KPVFFSIRAYISFIKPDQTMWYRACK 469



 Score =  166 bits (420), Expect(2) = e-144
 Identities = 78/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
 Frame = -3

Query: 624 QAVGSGYFCEACEKTDEECCLRYIVSLKVSDASGEAWIFVFNDQAEKIIGCSADDLDKLK 445
           +A+ SGY+CE C+K D+EC LRYI+++KVSD++GE W   FND+AEKIIGC+AD+L+ LK
Sbjct: 477 EAMDSGYWCEGCQKKDQECSLRYIMAVKVSDSTGETWFSAFNDEAEKIIGCTADELNNLK 536

Query: 444 SQEGE-SAFQMKLKEVTWVLHLFRISVMPHEYNGEKRQRITARVVGPIDYAAQAKYMLEG 268
           S+EGE + FQ KLKE TW  HLFRISV   EYN EKRQRIT R V PID+AA+ + +L+ 
Sbjct: 537 SEEGEVNEFQTKLKETTWSSHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQD 596

Query: 267 LLKAKVSQ 244
           + K K SQ
Sbjct: 597 ISKKKTSQ 604


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1
            [Vitis vinifera]
          Length = 625

 Score =  362 bits (929), Expect(2) = e-144
 Identities = 179/267 (67%), Positives = 219/267 (82%)
 Frame = -1

Query: 1421 GTQIQATMFNEAAKKFLDKFQLWKVYYISKGSLRVANKQFKTVQNDYEMNLNENSVVEEA 1242
            GTQIQATMFNEAA+KF +KFQL KVYYISKG+L+VANKQFKTVQNDYEM LNENS VEEA
Sbjct: 225  GTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEA 284

Query: 1241 DDEASFVPEIKYNFVPIDELGPYVNGRELIDIIGVVQHVSPTVSIRRKIDNEMIPKRDIX 1062
             +E +F+PE K+ FV I+ELGPYVNG+EL+D+IGVVQ VSPT+SIRRK +N+++PKRDI 
Sbjct: 285  SNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDIT 344

Query: 1061 XXXXXXXXXXVSLWNDLATNSAHELLDMVDQSPIVAIKSLKVSDFQGISLSTLSRSSLVI 882
                      VSLWND ATN   ELLD  D+ PIVAIKSLKV DFQG+SLSTLS+S +++
Sbjct: 345  IADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLV 404

Query: 881  NPDLPEAKKLMTWYNSEGKDTSLSSVGSGLANSIKGGSQLGFTDRVFISHIINNPSLGDD 702
            NPD PE+KKL +WY+SEGK  S++S+GS ++ S KGG +  + DRV +SH+ +NPSLG+D
Sbjct: 405  NPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGED 464

Query: 701  GKPAFFNIEAYISFTKLDQSMWYRACK 621
             KP+FF+I AYISF K DQ+MWYRACK
Sbjct: 465  -KPSFFSIRAYISFIKPDQTMWYRACK 490



 Score =  177 bits (449), Expect(2) = e-144
 Identities = 84/127 (66%), Positives = 104/127 (81%), Gaps = 1/127 (0%)
 Frame = -3

Query: 621 AVGSGYFCEACEKTDEECCLRYIVSLKVSDASGEAWIFVFNDQAEKIIGCSADDLDKLKS 442
           A+GSGY+CE C+K D+EC LRYI+ +KVSDASGEAW+ +FN+QAE++ GCSAD+LDKLKS
Sbjct: 499 AIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKS 558

Query: 441 QEG-ESAFQMKLKEVTWVLHLFRISVMPHEYNGEKRQRITARVVGPIDYAAQAKYMLEGL 265
           QEG E+ FQ KLKE  WV HLFRISV  HEY  EKRQRITAR V P+D+AA+++ +LE +
Sbjct: 559 QEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEI 618

Query: 264 LKAKVSQ 244
            K K SQ
Sbjct: 619 SKMKTSQ 625


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  362 bits (929), Expect(2) = e-144
 Identities = 179/267 (67%), Positives = 219/267 (82%)
 Frame = -1

Query: 1421 GTQIQATMFNEAAKKFLDKFQLWKVYYISKGSLRVANKQFKTVQNDYEMNLNENSVVEEA 1242
            GTQIQATMFNEAA+KF +KFQL KVYYISKG+L+VANKQFKTVQNDYEM LNENS VEEA
Sbjct: 202  GTQIQATMFNEAARKFYEKFQLGKVYYISKGALKVANKQFKTVQNDYEMTLNENSEVEEA 261

Query: 1241 DDEASFVPEIKYNFVPIDELGPYVNGRELIDIIGVVQHVSPTVSIRRKIDNEMIPKRDIX 1062
             +E +F+PE K+ FV I+ELGPYVNG+EL+D+IGVVQ VSPT+SIRRK +N+++PKRDI 
Sbjct: 262  SNEETFIPEAKFKFVEIEELGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDIT 321

Query: 1061 XXXXXXXXXXVSLWNDLATNSAHELLDMVDQSPIVAIKSLKVSDFQGISLSTLSRSSLVI 882
                      VSLWND ATN   ELLD  D+ PIVAIKSLKV DFQG+SLSTLS+S +++
Sbjct: 322  IADKTKKTVVVSLWNDHATNVGQELLDNADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLV 381

Query: 881  NPDLPEAKKLMTWYNSEGKDTSLSSVGSGLANSIKGGSQLGFTDRVFISHIINNPSLGDD 702
            NPD PE+KKL +WY+SEGK  S++S+GS ++ S KGG +  + DRV +SH+ +NPSLG+D
Sbjct: 382  NPDTPESKKLRSWYDSEGKGASMASIGSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGED 441

Query: 701  GKPAFFNIEAYISFTKLDQSMWYRACK 621
             KP+FF+I AYISF K DQ+MWYRACK
Sbjct: 442  -KPSFFSIRAYISFIKPDQTMWYRACK 467



 Score =  177 bits (449), Expect(2) = e-144
 Identities = 84/127 (66%), Positives = 104/127 (81%), Gaps = 1/127 (0%)
 Frame = -3

Query: 621 AVGSGYFCEACEKTDEECCLRYIVSLKVSDASGEAWIFVFNDQAEKIIGCSADDLDKLKS 442
           A+GSGY+CE C+K D+EC LRYI+ +KVSDASGEAW+ +FN+QAE++ GCSAD+LDKLKS
Sbjct: 476 AIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKS 535

Query: 441 QEG-ESAFQMKLKEVTWVLHLFRISVMPHEYNGEKRQRITARVVGPIDYAAQAKYMLEGL 265
           QEG E+ FQ KLKE  WV HLFRISV  HEY  EKRQRITAR V P+D+AA+++ +LE +
Sbjct: 536 QEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEI 595

Query: 264 LKAKVSQ 244
            K K SQ
Sbjct: 596 SKMKTSQ 602