BLASTX nr result

ID: Lithospermum22_contig00008600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008600
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2...   193   3e-47
ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote...   191   1e-46
ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like prote...   191   2e-46
gb|AFK41594.1| unknown [Medicago truncatula]                          191   2e-46
emb|CBI24863.3| unnamed protein product [Vitis vinifera]              189   4e-46

>ref|XP_002299952.1| predicted protein [Populus trichocarpa]
           gi|224104033|ref|XP_002313290.1| predicted protein
           [Populus trichocarpa] gi|118483640|gb|ABK93714.1|
           unknown [Populus trichocarpa]
           gi|222847210|gb|EEE84757.1| predicted protein [Populus
           trichocarpa] gi|222849698|gb|EEE87245.1| predicted
           protein [Populus trichocarpa]
          Length = 99

 Score =  193 bits (491), Expect = 3e-47
 Identities = 96/99 (96%), Positives = 98/99 (98%)
 Frame = +2

Query: 86  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDNDDPLKT 265
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT 60

Query: 266 TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFIQPDGA 382
           TDQTRRLGLIVCRGTAVMLV+PTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA 99


>ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1
           [Vitis vinifera] gi|359487265|ref|XP_003633552.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 2 [Vitis vinifera]
           gi|359487267|ref|XP_003633553.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm7-like isoform 3
           [Vitis vinifera] gi|359487269|ref|XP_003633554.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
           isoform 4 [Vitis vinifera]
          Length = 99

 Score =  191 bits (486), Expect = 1e-46
 Identities = 96/99 (96%), Positives = 97/99 (97%)
 Frame = +2

Query: 86  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDNDDPLKT 265
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDP KT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKT 60

Query: 266 TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFIQPDGA 382
           TDQTRRLGLIVCRGTAVMLV+PTDGTDEIANPFIQPDGA
Sbjct: 61  TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 99


>ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
           max]
          Length = 99

 Score =  191 bits (484), Expect = 2e-46
 Identities = 95/99 (95%), Positives = 97/99 (97%)
 Frame = +2

Query: 86  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDNDDPLKT 265
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 266 TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFIQPDGA 382
           TDQTR LGLIVCRGTAVMLV+PTDGTDEIANPFIQPDG+
Sbjct: 61  TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS 99


>gb|AFK41594.1| unknown [Medicago truncatula]
          Length = 99

 Score =  191 bits (484), Expect = 2e-46
 Identities = 95/99 (95%), Positives = 97/99 (97%)
 Frame = +2

Query: 86  MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDNDDPLKT 265
           MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDPLKT
Sbjct: 1   MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT 60

Query: 266 TDQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFIQPDGA 382
           TDQTR LGLIVCRGTAVMLV+PTDGTDEIANPF+QPDGA
Sbjct: 61  TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFLQPDGA 99


>emb|CBI24863.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  189 bits (481), Expect = 4e-46
 Identities = 95/98 (96%), Positives = 96/98 (97%)
 Frame = +2

Query: 89  SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDNDDPLKTT 268
           SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRD DDP KTT
Sbjct: 10  SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTT 69

Query: 269 DQTRRLGLIVCRGTAVMLVAPTDGTDEIANPFIQPDGA 382
           DQTRRLGLIVCRGTAVMLV+PTDGTDEIANPFIQPDGA
Sbjct: 70  DQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA 107


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