BLASTX nr result

ID: Lithospermum22_contig00008537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008537
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin...   135   5e-30
ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleo...   134   6e-30
ref|XP_002302713.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...   133   2e-29
gb|ABK21523.1| unknown [Picea sitchensis]                             133   2e-29

>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
           gi|255629692|gb|ACU15195.1| unknown [Glycine max]
          Length = 117

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = -2

Query: 205 MSRPMDEDTPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 26
           MSRPM+EDT  KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDTAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 25  LENVREMW 2
           LENVREMW
Sbjct: 61  LENVREMW 68


>ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Glycine max]
          Length = 108

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = -2

Query: 205 MSRPMDEDTPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 26
           MSRPM+EDT  KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDTVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 25  LENVREMW 2
           LENVREMW
Sbjct: 61  LENVREMW 68


>ref|XP_002302713.1| predicted protein [Populus trichocarpa]
           gi|224128478|ref|XP_002320342.1| predicted protein
           [Populus trichocarpa] gi|118481477|gb|ABK92681.1|
           unknown [Populus trichocarpa]
           gi|222844439|gb|EEE81986.1| predicted protein [Populus
           trichocarpa] gi|222861115|gb|EEE98657.1| predicted
           protein [Populus trichocarpa]
          Length = 108

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -2

Query: 205 MSRPMDEDTPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 26
           MSRPM+ED P KNEEEEF+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAPSKNEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 25  LENVREMW 2
           LENVREMW
Sbjct: 61  LENVREMW 68


>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/68 (92%), Positives = 65/68 (95%)
 Frame = -2

Query: 205 MSRPMDEDTPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 26
           MSRPM+ED   KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 25  LENVREMW 2
           LENVREMW
Sbjct: 61  LENVREMW 68


>gb|ABK21523.1| unknown [Picea sitchensis]
          Length = 108

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/68 (91%), Positives = 65/68 (95%)
 Frame = -2

Query: 205 MSRPMDEDTPVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 26
           MS+PMDED P K EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSKPMDEDMPEKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 25  LENVREMW 2
           LENV+EMW
Sbjct: 61  LENVKEMW 68


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