BLASTX nr result

ID: Lithospermum22_contig00008494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008494
         (1795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleop...   322   3e-85
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   321   3e-85
ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleop...   319   2e-84
ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, put...   318   2e-84
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   318   2e-84

>ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
            sativus]
          Length = 263

 Score =  322 bits (824), Expect = 3e-85
 Identities = 169/257 (65%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1001 RRAMLGSGGVSDGYEIGSKRPRM-DSNPYFAVPXXXXXXXXXXXXXXXYDSLAFPVVRLR 825
            R AMLGSGGVSDGYE+GSKR RM + NPYFAV                    AFPVVRLR
Sbjct: 5    RGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTH-AFPVVRLR 63

Query: 824  GLPFDCTEIDIVKFFGHLDIVDVFLVTKNERFSGEALVVFALPMHAELALQRDRQNIGRR 645
            GLPF+CT+IDI KFF  LDIVDV LV KN RF GEA VVFA  +  E ALQRDRQN+GRR
Sbjct: 64   GLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRR 123

Query: 644  YVEVFKCRKQDYYNAIAAEAMSFGGGALEHDRHDTPPPRPKKSIDKDQLEYTEILKLRGL 465
            YVEVF+C++QDYYNA+AAE      G  ++D H +PPPR K+  DKDQ+EYTEILKLRGL
Sbjct: 124  YVEVFRCKRQDYYNAVAAEVNY--EGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGL 181

Query: 464  PFTVKKSDILKFFGEDFNLTDDKIQIAARSDGRVTGEAFVEFPSAEEAKKAMCKDKRTIG 285
            PF+V KS+I++FFGE F+L +D+I IA+R DG+ TGEA+VEF SAEEAK+AM KDK TIG
Sbjct: 182  PFSVTKSNIIEFFGE-FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIG 240

Query: 284  SRYIELFPSTPDEAKRA 234
            SRY+ELFPSTP+EA+RA
Sbjct: 241  SRYVELFPSTPNEARRA 257


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
            vinifera]
          Length = 264

 Score =  321 bits (823), Expect = 3e-85
 Identities = 174/258 (67%), Positives = 198/258 (76%), Gaps = 2/258 (0%)
 Frame = -3

Query: 1001 RRAMLGSGGVSDGYEIGSKRPRM-DSNPYFAVPXXXXXXXXXXXXXXXYDSLAFPVVRLR 825
            R AMLGSGGVSDGYEIGSKR RM +SNPYFAV                     FPVVRLR
Sbjct: 5    RGAMLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPP-TFPVVRLR 63

Query: 824  GLPFDCTEIDIVKFFGHLDIVDVFLVTKNERFSGEALVVFALPMHAELALQRDRQNIGRR 645
            GLPF+CT+IDI KFF  LDIVDV LV K+ RFSGEA VVFA  M A+ ALQRDRQN+GRR
Sbjct: 64   GLPFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRR 123

Query: 644  YVEVFKCRKQDYYNAIAAEAMSFGGGALEHDRHDTPPP-RPKKSIDKDQLEYTEILKLRG 468
            YVEVF+C+KQDYY+A+A+E      G  ++D H +PPP R K+  DKDQ+E+TEILKLRG
Sbjct: 124  YVEVFRCKKQDYYHAVASEVNY--EGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRG 181

Query: 467  LPFTVKKSDILKFFGEDFNLTDDKIQIAARSDGRVTGEAFVEFPSAEEAKKAMCKDKRTI 288
            LPF+VKKS IL+FFG DF L DDK+ IA R DG+ TGEA+VEF SAEEAKKAM KDK TI
Sbjct: 182  LPFSVKKSQILEFFG-DFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTI 240

Query: 287  GSRYIELFPSTPDEAKRA 234
            GSRY+ELFPSTPDEA+RA
Sbjct: 241  GSRYVELFPSTPDEARRA 258


>ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
           sativus]
          Length = 256

 Score =  319 bits (817), Expect = 2e-84
 Identities = 167/254 (65%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = -3

Query: 992 MLGSGGVSDGYEIGSKRPRM-DSNPYFAVPXXXXXXXXXXXXXXXYDSLAFPVVRLRGLP 816
           MLGSGGVSDGYE+GSKR RM + NPYFAV                    AFPVVRLRGLP
Sbjct: 1   MLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTH-AFPVVRLRGLP 59

Query: 815 FDCTEIDIVKFFGHLDIVDVFLVTKNERFSGEALVVFALPMHAELALQRDRQNIGRRYVE 636
           F+CT+IDI KFF  LDIVDV LV KN RF GEA VVFA  +  E ALQRDRQN+GRRYVE
Sbjct: 60  FNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVE 119

Query: 635 VFKCRKQDYYNAIAAEAMSFGGGALEHDRHDTPPPRPKKSIDKDQLEYTEILKLRGLPFT 456
           VF+C++QDYYNA+AAE      G  ++D H +PPPR K+  DKDQ+EYTEILKLRGLPF+
Sbjct: 120 VFRCKRQDYYNAVAAEVNY--EGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFS 177

Query: 455 VKKSDILKFFGEDFNLTDDKIQIAARSDGRVTGEAFVEFPSAEEAKKAMCKDKRTIGSRY 276
           V KS+I++FFGE F+L +D+I IA+R DG+ TGEA+VEF SAEEAK+AM KDK TIGSRY
Sbjct: 178 VTKSNIIEFFGE-FDLAEDRIHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMTIGSRY 236

Query: 275 IELFPSTPDEAKRA 234
           +ELFPSTP+EA+RA
Sbjct: 237 VELFPSTPNEARRA 250


>ref|XP_002521718.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus communis]
            gi|223539109|gb|EEF40705.1| heterogeneous nuclear
            ribonucleoprotein, putative [Ricinus communis]
          Length = 264

 Score =  318 bits (816), Expect = 2e-84
 Identities = 168/258 (65%), Positives = 197/258 (76%), Gaps = 2/258 (0%)
 Frame = -3

Query: 1001 RRAMLGSGGVSDGYEIGSKRPRM-DSNPYFAVPXXXXXXXXXXXXXXXYDSLAFPVVRLR 825
            R AMLGSGGVSDGYE+GSKRPRM +SNPYFAV                  S  FPVVRLR
Sbjct: 5    RGAMLGSGGVSDGYEVGSKRPRMMESNPYFAVSGGSSGFQPYGYGGGF-QSAPFPVVRLR 63

Query: 824  GLPFDCTEIDIVKFFGHLDIVDVFLVTKNERFSGEALVVFALPMHAELALQRDRQNIGRR 645
            GLPF+CT+IDI KFF  LDIVDV LV KN RF+GEA VVFA  M  E ALQRDRQN+GRR
Sbjct: 64   GLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFTGEAFVVFAGAMQVEFALQRDRQNMGRR 123

Query: 644  YVEVFKCRKQDYYNAIAAEAMSFGGGALEHDRHDTPPP-RPKKSIDKDQLEYTEILKLRG 468
            YVEVF+C++QDYYNA+AAE      G  + D H +PPP + K+  DKDQLEYTEILK+RG
Sbjct: 124  YVEVFRCKRQDYYNAVAAEVNY--EGIYDTDYHGSPPPSKAKRFSDKDQLEYTEILKMRG 181

Query: 467  LPFTVKKSDILKFFGEDFNLTDDKIQIAARSDGRVTGEAFVEFPSAEEAKKAMCKDKRTI 288
            LPF+ KK +I++FF ++F L +D+I IA R DG+ TGEA+VEF SA+EAK+AM KDK TI
Sbjct: 182  LPFSAKKPEIIEFF-KEFELVEDRIHIACRPDGKATGEAYVEFASADEAKRAMSKDKMTI 240

Query: 287  GSRYIELFPSTPDEAKRA 234
            GSRY+ELFPSTPDEA+RA
Sbjct: 241  GSRYVELFPSTPDEARRA 258


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  318 bits (816), Expect = 2e-84
 Identities = 172/255 (67%), Positives = 196/255 (76%), Gaps = 2/255 (0%)
 Frame = -3

Query: 992 MLGSGGVSDGYEIGSKRPRM-DSNPYFAVPXXXXXXXXXXXXXXXYDSLAFPVVRLRGLP 816
           MLGSGGVSDGYEIGSKR RM +SNPYFAV                     FPVVRLRGLP
Sbjct: 1   MLGSGGVSDGYEIGSKRQRMMESNPYFAVSSSASGFQPYGYGSGFQPP-TFPVVRLRGLP 59

Query: 815 FDCTEIDIVKFFGHLDIVDVFLVTKNERFSGEALVVFALPMHAELALQRDRQNIGRRYVE 636
           F+CT+IDI KFF  LDIVDV LV K+ RFSGEA VVFA  M A+ ALQRDRQN+GRRYVE
Sbjct: 60  FNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGEAYVVFAGSMQADFALQRDRQNMGRRYVE 119

Query: 635 VFKCRKQDYYNAIAAEAMSFGGGALEHDRHDTPPP-RPKKSIDKDQLEYTEILKLRGLPF 459
           VF+C+KQDYY+A+A+E      G  ++D H +PPP R K+  DKDQ+E+TEILKLRGLPF
Sbjct: 120 VFRCKKQDYYHAVASEVNY--EGIYDNDFHGSPPPSRSKRFSDKDQMEHTEILKLRGLPF 177

Query: 458 TVKKSDILKFFGEDFNLTDDKIQIAARSDGRVTGEAFVEFPSAEEAKKAMCKDKRTIGSR 279
           +VKKS IL+FFG DF L DDK+ IA R DG+ TGEA+VEF SAEEAKKAM KDK TIGSR
Sbjct: 178 SVKKSQILEFFG-DFELGDDKVHIACRPDGKATGEAYVEFASAEEAKKAMGKDKMTIGSR 236

Query: 278 YIELFPSTPDEAKRA 234
           Y+ELFPSTPDEA+RA
Sbjct: 237 YVELFPSTPDEARRA 251


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