BLASTX nr result

ID: Lithospermum22_contig00008479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008479
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   387   e-110
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   384   e-109
ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|2...   391   e-109
ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putativ...   390   e-108
ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arab...   392   e-108

>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
           sativus]
          Length = 449

 Score =  387 bits (994), Expect(2) = e-110
 Identities = 194/256 (75%), Positives = 218/256 (85%)
 Frame = +2

Query: 53  LAH*IADQFTALGAGIGLKCAVLVGGIPKMDQMIALGKRPHVIVATPGRLLHHISETKEF 232
           LA  IA+QF ALG+GIG+KCAVLVGG+  + Q I L KRPHV+V TPGRL+ H++ TK F
Sbjct: 89  LAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQAINLAKRPHVVVGTPGRLVDHLTNTKGF 148

Query: 233 SLRSLKCFVLDEADRLLNEDFEESLEKILDAIPRERTTYLFSATMTNKVKKLQRACLRDP 412
           SLR+LK  VLDEADRLLNEDFE+S+++IL+ IPRER TYLFSATMT KV+KLQRACLR+P
Sbjct: 149 SLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNP 208

Query: 413 VKIEAASKYSTVDTLKQQYAFVPAKHKDCYLVYTLNEMSESMSMVFTRTCDAXXXXXXXX 592
           VKIEAA+KYSTVDTLKQQY F+PAK+K+CYLVY L EMS S SMVFTRTCDA        
Sbjct: 209 VKIEAATKYSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLIL 268

Query: 593 XXXXFRAIPINGQMSQPKRLGALNKFKAGECNILVCTDVASRGLDIPSVDMVINYDIPMN 772
                RAIPI+GQM+Q KRLGALNKFKAGECNIL+CTDVASRGLDIPSVDMVINYDIP N
Sbjct: 269 RNLGLRAIPISGQMTQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSN 328

Query: 773 SKDYIHRVGRTARAGR 820
           SKDYIHRVGRTARAGR
Sbjct: 329 SKDYIHRVGRTARAGR 344



 Score = 40.0 bits (92), Expect(2) = e-110
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +3

Query: 3   IIQALMDKPQAFFACVLSPTR 65
           I+QAL++ PQAFFACVLSPTR
Sbjct: 67  ILQALLEAPQAFFACVLSPTR 87


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
           vinifera]
          Length = 470

 Score =  384 bits (986), Expect(2) = e-109
 Identities = 192/256 (75%), Positives = 215/256 (83%)
 Frame = +2

Query: 53  LAH*IADQFTALGAGIGLKCAVLVGGIPKMDQMIALGKRPHVIVATPGRLLHHISETKEF 232
           LA  IA+QF ALG+GIGLKCAVLVGG+    Q IAL KRPH++V TPGRL+ H+S TK F
Sbjct: 123 LAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAIALAKRPHIVVGTPGRLMDHLSNTKGF 182

Query: 233 SLRSLKCFVLDEADRLLNEDFEESLEKILDAIPRERTTYLFSATMTNKVKKLQRACLRDP 412
           SLR++K  VLDEADRLLN+DFE+++++IL  IPRER TYLFSATMT KV+KLQRACLR+P
Sbjct: 183 SLRTMKYLVLDEADRLLNDDFEKAIDEILSVIPRERKTYLFSATMTKKVRKLQRACLRNP 242

Query: 413 VKIEAASKYSTVDTLKQQYAFVPAKHKDCYLVYTLNEMSESMSMVFTRTCDAXXXXXXXX 592
           VKIE ASKYSTVDTLKQQY FVPAK+K+CYLVY L E+S S +MVFTRTCDA        
Sbjct: 243 VKIEVASKYSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLL 302

Query: 593 XXXXFRAIPINGQMSQPKRLGALNKFKAGECNILVCTDVASRGLDIPSVDMVINYDIPMN 772
                RAIPI+G MSQ KRLGALNKFKAGECNIL+CTDVASRGLDIPSVDMVINYDIP N
Sbjct: 303 RNLGLRAIPISGHMSQAKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPSN 362

Query: 773 SKDYIHRVGRTARAGR 820
           SKDYIHRVGRTARAGR
Sbjct: 363 SKDYIHRVGRTARAGR 378



 Score = 37.7 bits (86), Expect(2) = e-109
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 3   IIQALMDKPQAFFACVLSPTR 65
           I+QAL+D PQ  FACVLSPTR
Sbjct: 101 ILQALLDTPQVLFACVLSPTR 121


>ref|XP_002310673.1| predicted protein [Populus trichocarpa] gi|222853576|gb|EEE91123.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  391 bits (1004), Expect(2) = e-109
 Identities = 195/256 (76%), Positives = 217/256 (84%)
 Frame = +2

Query: 53  LAH*IADQFTALGAGIGLKCAVLVGGIPKMDQMIALGKRPHVIVATPGRLLHHISETKEF 232
           LA  IA+QF ALG+GIGL+C VLVGG+  + Q + L KRPH++VATPGRLL H+S TK F
Sbjct: 110 LAIQIAEQFEALGSGIGLRCGVLVGGVDIVQQTLILAKRPHIVVATPGRLLDHLSNTKGF 169

Query: 233 SLRSLKCFVLDEADRLLNEDFEESLEKILDAIPRERTTYLFSATMTNKVKKLQRACLRDP 412
           SLR+LK  VLDEADRLLNE+FE+SL++IL+ IPR+R TYLFSATMT KVKKLQRACLR+P
Sbjct: 170 SLRTLKYLVLDEADRLLNEEFEKSLDEILNVIPRDRKTYLFSATMTKKVKKLQRACLRNP 229

Query: 413 VKIEAASKYSTVDTLKQQYAFVPAKHKDCYLVYTLNEMSESMSMVFTRTCDAXXXXXXXX 592
           VKIEAASKYSTVDTLKQQY FVP+KHKDCYLVY L EMS S +MVFTRTCDA        
Sbjct: 230 VKIEAASKYSTVDTLKQQYRFVPSKHKDCYLVYILTEMSNSTAMVFTRTCDATSFLALVL 289

Query: 593 XXXXFRAIPINGQMSQPKRLGALNKFKAGECNILVCTDVASRGLDIPSVDMVINYDIPMN 772
                RAIPING MSQPKRLGALNKFKA ECN+L+CTDVASRGLDIPSVDMVINYD+P N
Sbjct: 290 RNLGLRAIPINGHMSQPKRLGALNKFKARECNVLICTDVASRGLDIPSVDMVINYDVPSN 349

Query: 773 SKDYIHRVGRTARAGR 820
           SKDYIHRVGRTARAGR
Sbjct: 350 SKDYIHRVGRTARAGR 365



 Score = 29.6 bits (65), Expect(2) = e-109
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 4/25 (16%)
 Frame = +3

Query: 3   IIQALMDKPQA----FFACVLSPTR 65
           I+QAL++  Q     FFACVLSPTR
Sbjct: 84  ILQALLESSQKSVQPFFACVLSPTR 108


>ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 442

 Score =  390 bits (1001), Expect(2) = e-108
 Identities = 197/256 (76%), Positives = 217/256 (84%)
 Frame = +2

Query: 53  LAH*IADQFTALGAGIGLKCAVLVGGIPKMDQMIALGKRPHVIVATPGRLLHHISETKEF 232
           LA  IA+QF ALG+ IG+KCAVLVGG+  + Q IALGKRPH++VATPGRL+ H+S TK F
Sbjct: 93  LAIQIAEQFEALGSDIGVKCAVLVGGVDMVQQSIALGKRPHIVVATPGRLVDHLSNTKGF 152

Query: 233 SLRSLKCFVLDEADRLLNEDFEESLEKILDAIPRERTTYLFSATMTNKVKKLQRACLRDP 412
           SLR+LK  VLDEADRLLNEDFE+SL++IL  IPRER T+LFSATMT KVKKLQRACLR+P
Sbjct: 153 SLRTLKYLVLDEADRLLNEDFEKSLDEILKVIPRERRTFLFSATMTKKVKKLQRACLRNP 212

Query: 413 VKIEAASKYSTVDTLKQQYAFVPAKHKDCYLVYTLNEMSESMSMVFTRTCDAXXXXXXXX 592
           VKIEAASKYSTVDTLKQ+Y F+PAK+KDCYLVY L E S S SMVFTRTCDA        
Sbjct: 213 VKIEAASKYSTVDTLKQEYRFIPAKYKDCYLVYILTEKSGSTSMVFTRTCDATTFLALVL 272

Query: 593 XXXXFRAIPINGQMSQPKRLGALNKFKAGECNILVCTDVASRGLDIPSVDMVINYDIPMN 772
                RAIPING M+Q KRLGALNKFKAGECNIL+CTDVASRGLDIPSVDMVINYDIP N
Sbjct: 273 RNLGLRAIPINGHMTQSKRLGALNKFKAGECNILICTDVASRGLDIPSVDMVINYDIPTN 332

Query: 773 SKDYIHRVGRTARAGR 820
           SKDYIHRVGRTARAGR
Sbjct: 333 SKDYIHRVGRTARAGR 348



 Score = 30.0 bits (66), Expect(2) = e-108
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 3   IIQALMDKPQAFFACVLSPTR 65
           +++A     QAFFACVLSPTR
Sbjct: 71  LLEASEKSVQAFFACVLSPTR 91


>ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
           lyrata] gi|297312243|gb|EFH42667.1| hypothetical protein
           ARALYDRAFT_919338 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  392 bits (1006), Expect(2) = e-108
 Identities = 201/256 (78%), Positives = 219/256 (85%)
 Frame = +2

Query: 53  LAH*IADQFTALGAGIGLKCAVLVGGIPKMDQMIALGKRPHVIVATPGRLLHHISETKEF 232
           LA  IA+QF ALGA I L+CAVLVGGI +M Q IALGKRPHVIVATPGRL  H+S+TK F
Sbjct: 101 LAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGF 160

Query: 233 SLRSLKCFVLDEADRLLNEDFEESLEKILDAIPRERTTYLFSATMTNKVKKLQRACLRDP 412
           SL+SLK  VLDEADRLLNEDFE+SL +IL+ IPRER T+LFSATMT KV+KLQRACLR+P
Sbjct: 161 SLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRNP 220

Query: 413 VKIEAASKYSTVDTLKQQYAFVPAKHKDCYLVYTLNEMSESMSMVFTRTCDAXXXXXXXX 592
           VKIEAASKYSTVDTLKQQY FV AK+KDCYLVY L+EM ES SM+FTRTCD         
Sbjct: 221 VKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVL 280

Query: 593 XXXXFRAIPINGQMSQPKRLGALNKFKAGECNILVCTDVASRGLDIPSVDMVINYDIPMN 772
               FRAIPI+GQM+Q KRLGALNKFKAGECNILVCTDVASRGLDIPSVD+VINYDIP N
Sbjct: 281 RSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTN 340

Query: 773 SKDYIHRVGRTARAGR 820
           SKDYIHRVGRTARAGR
Sbjct: 341 SKDYIHRVGRTARAGR 356



 Score = 26.9 bits (58), Expect(2) = e-108
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +3

Query: 33  AFFACVLSPTR 65
           AFFACVLSPTR
Sbjct: 89  AFFACVLSPTR 99


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