BLASTX nr result

ID: Lithospermum22_contig00008469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008469
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                 215   3e-54
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]       215   3e-54
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                 214   8e-54
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   205   4e-51
ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   205   4e-51

>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  215 bits (547), Expect = 3e-54
 Identities = 111/132 (84%), Positives = 114/132 (86%), Gaps = 15/132 (11%)
 Frame = -1

Query: 475 FSHRSGRDLVNMAKKRTNVIPIVEDARHPAKYRMLVGL---------------ILALNAS 341
           FSHRSGRDLVNMAKKRTNVIPI+EDARHPAKYRMLVG+               ILALNAS
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 242

Query: 340 YFLKAGGHFVISIKANCIDSTVPAEVVFAQEVKKLQSEQFKPMEQVTLEPFERDHACVVG 161
           YFLKAGGHFVISIKANCIDSTVPAE VFAQEVKKLQ+EQFKPMEQVTLEPFERDHACVVG
Sbjct: 243 YFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVG 302

Query: 160 AYRVAKKQKTAA 125
           AYRV KKQK AA
Sbjct: 303 AYRVPKKQKAAA 314


>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score =  215 bits (547), Expect = 3e-54
 Identities = 111/132 (84%), Positives = 114/132 (86%), Gaps = 15/132 (11%)
 Frame = -1

Query: 475 FSHRSGRDLVNMAKKRTNVIPIVEDARHPAKYRMLVGL---------------ILALNAS 341
           FSHRSGRDLVNMAKKRTNVIPI+EDARHPAKYRMLVG+               ILALNAS
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 242

Query: 340 YFLKAGGHFVISIKANCIDSTVPAEVVFAQEVKKLQSEQFKPMEQVTLEPFERDHACVVG 161
           YFLKAGGHFVISIKANCIDSTVPAE VFAQEVKKLQ+EQFKPMEQVTLEPFERDHACVVG
Sbjct: 243 YFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVG 302

Query: 160 AYRVAKKQKTAA 125
           AYRV KKQK AA
Sbjct: 303 AYRVPKKQKAAA 314


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score =  214 bits (544), Expect = 8e-54
 Identities = 110/132 (83%), Positives = 114/132 (86%), Gaps = 15/132 (11%)
 Frame = -1

Query: 475 FSHRSGRDLVNMAKKRTNVIPIVEDARHPAKYRMLVGL---------------ILALNAS 341
           FSHRSGRDLVNMAKKRTNVIPI+EDARHPAKYRMLVG+               ILALNAS
Sbjct: 183 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 242

Query: 340 YFLKAGGHFVISIKANCIDSTVPAEVVFAQEVKKLQSEQFKPMEQVTLEPFERDHACVVG 161
           YFLKAGGHFV+SIKANCIDSTVPAE VFAQEVKKLQ+EQFKPMEQVTLEPFERDHACVVG
Sbjct: 243 YFLKAGGHFVMSIKANCIDSTVPAEAVFAQEVKKLQAEQFKPMEQVTLEPFERDHACVVG 302

Query: 160 AYRVAKKQKTAA 125
           AYRV KKQK AA
Sbjct: 303 AYRVPKKQKAAA 314


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score =  205 bits (521), Expect = 4e-51
 Identities = 105/132 (79%), Positives = 110/132 (83%), Gaps = 15/132 (11%)
 Frame = -1

Query: 475 FSHRSGRDLVNMAKKRTNVIPIVEDARHPAKYRMLVGL---------------ILALNAS 341
           FSHRSGRDLVNMAKKRTNVIPI+EDARHPAKYRMLVG+               ILALNAS
Sbjct: 185 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 244

Query: 340 YFLKAGGHFVISIKANCIDSTVPAEVVFAQEVKKLQSEQFKPMEQVTLEPFERDHACVVG 161
           YFLKAGGHFVISIKANCIDSTVPAE VFAQEVKKLQ++ FKP EQVTLEPFERDHACVVG
Sbjct: 245 YFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVG 304

Query: 160 AYRVAKKQKTAA 125
            YR+ KKQK  A
Sbjct: 305 GYRMPKKQKPTA 316


>ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 1
           [Vitis vinifera]
          Length = 311

 Score =  205 bits (521), Expect = 4e-51
 Identities = 105/132 (79%), Positives = 110/132 (83%), Gaps = 15/132 (11%)
 Frame = -1

Query: 475 FSHRSGRDLVNMAKKRTNVIPIVEDARHPAKYRMLVGL---------------ILALNAS 341
           FSHRSGRDLVNMAKKRTNVIPI+EDARHPAKYRMLVG+               ILALNAS
Sbjct: 180 FSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS 239

Query: 340 YFLKAGGHFVISIKANCIDSTVPAEVVFAQEVKKLQSEQFKPMEQVTLEPFERDHACVVG 161
           YFLKAGGHFVISIKANCIDSTVPAE VFAQEVKKLQ++ FKP EQVTLEPFERDHACVVG
Sbjct: 240 YFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVG 299

Query: 160 AYRVAKKQKTAA 125
            YR+ KKQK  A
Sbjct: 300 GYRMPKKQKPTA 311


Top