BLASTX nr result

ID: Lithospermum22_contig00008444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008444
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529881.1| Charged multivesicular body protein 2b-B, pu...   226   8e-57
ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]          224   3e-56
emb|CBI39012.3| unnamed protein product [Vitis vinifera]              224   3e-56
ref|XP_004158699.1| PREDICTED: protein LOL3-like [Cucumis sativus]    223   8e-56
ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associat...   221   2e-55

>ref|XP_002529881.1| Charged multivesicular body protein 2b-B, putative [Ricinus
           communis] gi|223530608|gb|EEF32484.1| Charged
           multivesicular body protein 2b-B, putative [Ricinus
           communis]
          Length = 405

 Score =  226 bits (576), Expect = 8e-57
 Identities = 109/190 (57%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
 Frame = -3

Query: 967 FLYFTPFFIYINPILFSFLSS--ITDMQNQLACSGCRTVLLYPPGASNVCCAICSSITAV 794
           F  F   F+ +  +L   +SS  I  MQ Q+ C+GCR++LLYP GA NVCCA+CS+ITA 
Sbjct: 207 FWLFPSRFLLLKALLGDCVSSSIIPAMQGQIMCNGCRSILLYPRGAPNVCCALCSTITAA 266

Query: 793 PPPGMEMVQLICGGCRILLMHPRGATSVRCSCCHTVNMVPASNQIAHVNCGNCRTMLMYP 614
           PPPGMEM QLICGGCR LLMH RGATSVRCSCCHTVN+ P S Q AH+NC NCRT L+YP
Sbjct: 267 PPPGMEMAQLICGGCRTLLMHTRGATSVRCSCCHTVNLAPVSGQAAHINCRNCRTTLVYP 326

Query: 613 SGAPSVKCAICQFITNINRGDAM----XXXXXXXXXXXXXXTQGSARNPNQTVVVHNPMS 446
            GAPSVKCA+C ++TN++ G+                    +  ++++  QTVVV NPMS
Sbjct: 327 YGAPSVKCALCHYVTNVSMGNVRVALPTNRPNGTTGMTPSTSTSTSQSQTQTVVVENPMS 386

Query: 445 VDESGKLVSN 416
           VDESGKLVSN
Sbjct: 387 VDESGKLVSN 396


>ref|XP_002276731.2| PREDICTED: protein LSD1 [Vitis vinifera]
          Length = 264

 Score =  224 bits (571), Expect = 3e-56
 Identities = 109/195 (55%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
 Frame = -3

Query: 997 FQNHLFVLNIFLYFTPFFIYINPILFSFLSSITDMQNQLACSGCRTVLLYPPGASNVCCA 818
           F + +F  N   +  PF    +   FS+ S+   MQ+ L C+GCR++L+YP GA+NVCCA
Sbjct: 65  FSHRIFAFNSSPF--PFNCSSSERKFSYQSA---MQSHLMCNGCRSILVYPRGATNVCCA 119

Query: 817 ICSSITAVPPPGMEMVQLICGGCRILLMHPRGATSVRCSCCHTVNMVPA-SNQIAHVNCG 641
           +C+S+T+VPPPG+EM QLICGGCR LLM+ RGATSVRCSCCHTVN+ PA SNQ+AHVNCG
Sbjct: 120 LCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGATSVRCSCCHTVNLAPAPSNQVAHVNCG 179

Query: 640 NCRTMLMYPSGAPSVKCAICQFITNINRGDAMXXXXXXXXXXXXXXTQGSARNPNQTVVV 461
           NCRT LMYP GAPSVKCA+C ++T++   +                    + + +QTVVV
Sbjct: 180 NCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRVPIPVHRPNAAAISASTPSTSSSQTVVV 239

Query: 460 HNPMSVDESGKLVSN 416
            NPMSVDESGKLVSN
Sbjct: 240 KNPMSVDESGKLVSN 254


>emb|CBI39012.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  224 bits (571), Expect = 3e-56
 Identities = 109/195 (55%), Positives = 138/195 (70%), Gaps = 1/195 (0%)
 Frame = -3

Query: 997 FQNHLFVLNIFLYFTPFFIYINPILFSFLSSITDMQNQLACSGCRTVLLYPPGASNVCCA 818
           F + +F  N   +  PF    +   FS+ S+   MQ+ L C+GCR++L+YP GA+NVCCA
Sbjct: 60  FSHRIFAFNSSPF--PFNCSSSERKFSYQSA---MQSHLMCNGCRSILVYPRGATNVCCA 114

Query: 817 ICSSITAVPPPGMEMVQLICGGCRILLMHPRGATSVRCSCCHTVNMVPA-SNQIAHVNCG 641
           +C+S+T+VPPPG+EM QLICGGCR LLM+ RGATSVRCSCCHTVN+ PA SNQ+AHVNCG
Sbjct: 115 LCNSVTSVPPPGLEMAQLICGGCRTLLMYTRGATSVRCSCCHTVNLAPAPSNQVAHVNCG 174

Query: 640 NCRTMLMYPSGAPSVKCAICQFITNINRGDAMXXXXXXXXXXXXXXTQGSARNPNQTVVV 461
           NCRT LMYP GAPSVKCA+C ++T++   +                    + + +QTVVV
Sbjct: 175 NCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRVPIPVHRPNAAAISASTPSTSSSQTVVV 234

Query: 460 HNPMSVDESGKLVSN 416
            NPMSVDESGKLVSN
Sbjct: 235 KNPMSVDESGKLVSN 249


>ref|XP_004158699.1| PREDICTED: protein LOL3-like [Cucumis sativus]
          Length = 343

 Score =  223 bits (567), Expect = 8e-56
 Identities = 108/207 (52%), Positives = 142/207 (68%), Gaps = 10/207 (4%)
 Frame = -3

Query: 1006 IIQFQNHLFVLNIFLYFTPFFIYINPI-----LFSFLSSITDMQNQLACSGCRTVLLYPP 842
            I +FQ     L++   +  + + +N +     L   L     MQ+QL CSGCR++LLYP 
Sbjct: 127  IKEFQKQSAQLDMTWTYVNYCLILNLVEEKFKLLKLLCIEAAMQSQLVCSGCRSILLYPG 186

Query: 841  GASNVCCAICSSITAVPPPGMEMVQLICGGCRILLMHPRGATSVRCSCCHTVNMVPASNQ 662
            GA+NVCCA+C+++T+VPPPG +M QLICGGCR LLM+ RGATSVRCSCCHTVN+ PA+NQ
Sbjct: 187  GATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGATSVRCSCCHTVNLAPATNQ 246

Query: 661  IAHVNCGNCRTMLMYPSGAPSVKCAICQFITNINRGDA-----MXXXXXXXXXXXXXXTQ 497
            +AHVNCGNCRT L++P GAPSVKCAIC ++TN+   +      +              + 
Sbjct: 247  VAHVNCGNCRTTLVFPYGAPSVKCAICHYVTNVGISNVRVPIPVHRRNGTISSGMPPSSS 306

Query: 496  GSARNPNQTVVVHNPMSVDESGKLVSN 416
              +++ +QTVVV NPMSVDESGKLVSN
Sbjct: 307  VRSQSQSQTVVVENPMSVDESGKLVSN 333


>ref|XP_004134888.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Cucumis sativus]
          Length = 410

 Score =  221 bits (564), Expect = 2e-55
 Identities = 101/165 (61%), Positives = 127/165 (76%), Gaps = 5/165 (3%)
 Frame = -3

Query: 895 MQNQLACSGCRTVLLYPPGASNVCCAICSSITAVPPPGMEMVQLICGGCRILLMHPRGAT 716
           MQ+QL CSGCR++LLYP GA+NVCCA+C+++T+VPPPG +M QLICGGCR LLM+ RGAT
Sbjct: 236 MQSQLVCSGCRSILLYPGGATNVCCALCNTVTSVPPPGTDMAQLICGGCRTLLMYARGAT 295

Query: 715 SVRCSCCHTVNMVPASNQIAHVNCGNCRTMLMYPSGAPSVKCAICQFITNINRGDA---- 548
           SVRCSCCHTVN+ PA+NQ+AHVNCGNCRT L++P GAPSVKCAIC ++TN+   +     
Sbjct: 296 SVRCSCCHTVNLAPATNQVAHVNCGNCRTTLVFPYGAPSVKCAICHYVTNVGISNVRVPI 355

Query: 547 -MXXXXXXXXXXXXXXTQGSARNPNQTVVVHNPMSVDESGKLVSN 416
            +              +   +++ +QTVVV NPMSVDESGKLVSN
Sbjct: 356 PVHRRNGTISSGMPPSSSVRSQSQSQTVVVENPMSVDESGKLVSN 400


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