BLASTX nr result

ID: Lithospermum22_contig00008334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008334
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632409.1| PREDICTED: transcription initiation factor T...   124   6e-27
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   124   6e-27
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     122   3e-26
gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]           121   5e-26
gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   121   7e-26

>ref|XP_003632409.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera] gi|297743959|emb|CBI36929.3| unnamed
           protein product [Vitis vinifera]
          Length = 146

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/104 (65%), Positives = 76/104 (73%)
 Frame = -3

Query: 376 TVGLVEDIVVEYVTDIVHKAQDTASKRGKLLTEDFLFLIRKXXXXXXXXXXXXXXXXXXX 197
           TV L+EDIVVEYVTD+VHKAQ+TASKRGKLLTEDFLFL+R                    
Sbjct: 70  TVALLEDIVVEYVTDLVHKAQETASKRGKLLTEDFLFLMR-------------------- 109

Query: 196 XFLFLIRKDLPKMNRCTELLSMNEELKQARKAFEVDEEKLASIE 65
                  KDLPK+NRCTELLSMNEELKQARKAF+VDEEKLA++E
Sbjct: 110 -------KDLPKLNRCTELLSMNEELKQARKAFDVDEEKLATME 146


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/104 (65%), Positives = 76/104 (73%)
 Frame = -3

Query: 376 TVGLVEDIVVEYVTDIVHKAQDTASKRGKLLTEDFLFLIRKXXXXXXXXXXXXXXXXXXX 197
           TV L+EDIVVEYVTD+VHKAQ+TASKRGKLLTEDFLFL+R                    
Sbjct: 52  TVALLEDIVVEYVTDLVHKAQETASKRGKLLTEDFLFLMR-------------------- 91

Query: 196 XFLFLIRKDLPKMNRCTELLSMNEELKQARKAFEVDEEKLASIE 65
                  KDLPK+NRCTELLSMNEELKQARKAF+VDEEKLA++E
Sbjct: 92  -------KDLPKLNRCTELLSMNEELKQARKAFDVDEEKLATME 128


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  122 bits (306), Expect = 3e-26
 Identities = 68/101 (67%), Positives = 72/101 (71%)
 Frame = -3

Query: 376 TVGLVEDIVVEYVTDIVHKAQDTASKRGKLLTEDFLFLIRKXXXXXXXXXXXXXXXXXXX 197
           TV LVEDIVV+YVTD+VHKAQD A+KRGKLLTEDFLFLI                     
Sbjct: 52  TVALVEDIVVDYVTDMVHKAQDVATKRGKLLTEDFLFLI--------------------- 90

Query: 196 XFLFLIRKDLPKMNRCTELLSMNEELKQARKAFEVDEEKLA 74
                 RKDLPK+NRCTELLSMNEELKQARKAFEVDEEKLA
Sbjct: 91  ------RKDLPKLNRCTELLSMNEELKQARKAFEVDEEKLA 125


>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score =  121 bits (304), Expect = 5e-26
 Identities = 68/102 (66%), Positives = 71/102 (69%)
 Frame = -3

Query: 376 TVGLVEDIVVEYVTDIVHKAQDTASKRGKLLTEDFLFLIRKXXXXXXXXXXXXXXXXXXX 197
           TV LVEDIVV+YVTD+VHKAQD ASKRGKLLTEDFLFLI                     
Sbjct: 52  TVALVEDIVVDYVTDMVHKAQDVASKRGKLLTEDFLFLI--------------------- 90

Query: 196 XFLFLIRKDLPKMNRCTELLSMNEELKQARKAFEVDEEKLAS 71
                 RKDLPK+NRCTELLSMNEELKQARKAFEVDEEK  S
Sbjct: 91  ------RKDLPKLNRCTELLSMNEELKQARKAFEVDEEKFPS 126


>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  121 bits (303), Expect = 7e-26
 Identities = 68/104 (65%), Positives = 71/104 (68%)
 Frame = -3

Query: 376 TVGLVEDIVVEYVTDIVHKAQDTASKRGKLLTEDFLFLIRKXXXXXXXXXXXXXXXXXXX 197
           TV LVEDIVVEYVTD+ HKAQD  SKRGKLL EDFL+LIR                    
Sbjct: 52  TVALVEDIVVEYVTDLAHKAQDIGSKRGKLLVEDFLYLIR-------------------- 91

Query: 196 XFLFLIRKDLPKMNRCTELLSMNEELKQARKAFEVDEEKLASIE 65
                  KDLPK+NRCTELLSM EELKQARKAFEVDEEKLASIE
Sbjct: 92  -------KDLPKLNRCTELLSMQEELKQARKAFEVDEEKLASIE 128


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