BLASTX nr result
ID: Lithospermum22_contig00008130
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00008130
(1389 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK43542.1| unknown [Lotus japonicus] 370 e-114
ref|XP_002323800.1| predicted protein [Populus trichocarpa] gi|1... 367 e-113
ref|XP_004139648.1| PREDICTED: proteasome subunit beta type-7-B-... 365 e-112
ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis t... 366 e-112
ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arab... 363 e-112
>gb|AFK43542.1| unknown [Lotus japonicus]
Length = 272
Score = 370 bits (951), Expect(3) = e-114
Identities = 176/195 (90%), Positives = 190/195 (97%)
Frame = -2
Query: 1067 SFLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAADTEA 888
SFLKTGTTIVGL+FQDGVILGADTRATEGPIVADKNCEKIHY+APNIYCCGAGTAADTEA
Sbjct: 33 SFLKTGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEA 92
Query: 887 VTDMISSQLTLHRYHTGRESRVVTALSLLKSHLFNYQGHVSAALVLGGVDITGPHLHTIY 708
VTDM+SSQL LHRYHTGRESRVVTAL+LLK HLFNYQGHVSAALVLGGVDITGPHLHTIY
Sbjct: 93 VTDMVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHTIY 152
Query: 707 PHGSTDTLPYATMGSGSLAAMAIFESKYREGLTRDEGVELVAEAIRSGIFNDLGSGSNVD 528
PHGSTDTLP+ATMGSGSLAAM++FESKY+E LTRDEGV++V EAI +G+FNDLGSGSNVD
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLTRDEGVKIVVEAICAGVFNDLGSGSNVD 212
Query: 527 ICVLTKGHKEYLRNH 483
+CV+TKGHKEYLRNH
Sbjct: 213 VCVITKGHKEYLRNH 227
Score = 53.1 bits (126), Expect(3) = e-114
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -3
Query: 376 KKTEILLTKITPLVEKIEIIEGGDAMEE 293
KKTE+LLTKITPL EK+E+IEGGDAMEE
Sbjct: 245 KKTEVLLTKITPLKEKVEVIEGGDAMEE 272
Score = 37.4 bits (85), Expect(3) = e-114
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1
Query: 1242 MSKVAIDMPPKGGFSFDLCKRN 1177
MSK +D+PPKGGFSFD C+RN
Sbjct: 1 MSKT-VDLPPKGGFSFDNCRRN 21
>ref|XP_002323800.1| predicted protein [Populus trichocarpa] gi|118484467|gb|ABK94109.1|
unknown [Populus trichocarpa] gi|222866802|gb|EEF03933.1|
predicted protein [Populus trichocarpa]
Length = 274
Score = 367 bits (943), Expect(3) = e-113
Identities = 174/194 (89%), Positives = 188/194 (96%)
Frame = -2
Query: 1064 FLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAADTEAV 885
F KTGTTIVGL+FQDGVILGADTRATEGPIV DKNCEKIHY+APNIYCCGAGTAADTEAV
Sbjct: 35 FRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAV 94
Query: 884 TDMISSQLTLHRYHTGRESRVVTALSLLKSHLFNYQGHVSAALVLGGVDITGPHLHTIYP 705
TDM+SSQL LHRYHTGRESRVVTAL+LLK HLFNYQGHVSAALVLGGVD TGPHLHTIYP
Sbjct: 95 TDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDCTGPHLHTIYP 154
Query: 704 HGSTDTLPYATMGSGSLAAMAIFESKYREGLTRDEGVELVAEAIRSGIFNDLGSGSNVDI 525
HGSTDTLP+ATMGSGSLAAMA+FESKY+EGL+RDEG++LV+EA+ SGIFNDLGSGSNVD+
Sbjct: 155 HGSTDTLPFATMGSGSLAAMAVFESKYKEGLSRDEGIKLVSEAVCSGIFNDLGSGSNVDV 214
Query: 524 CVLTKGHKEYLRNH 483
CV+TKGHKEYLRNH
Sbjct: 215 CVITKGHKEYLRNH 228
Score = 50.8 bits (120), Expect(3) = e-113
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = -3
Query: 376 KKTEILLTKITPLVEKIEIIEGGDAMEE 293
KKTE+L+TKITPL E++E+IEGGDAMEE
Sbjct: 246 KKTEVLMTKITPLRERVEVIEGGDAMEE 273
Score = 40.8 bits (94), Expect(3) = e-113
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1
Query: 1242 MSKVAIDMPPKGGFSFDLCKRN 1177
M+K +D+P KGGFSFDLCKRN
Sbjct: 1 MAKSCVDLPAKGGFSFDLCKRN 22
>ref|XP_004139648.1| PREDICTED: proteasome subunit beta type-7-B-like [Cucumis sativus]
gi|449475427|ref|XP_004154453.1| PREDICTED: proteasome
subunit beta type-7-B-like [Cucumis sativus]
Length = 273
Score = 365 bits (936), Expect(3) = e-112
Identities = 174/195 (89%), Positives = 188/195 (96%)
Frame = -2
Query: 1067 SFLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAADTEA 888
S+LKTGTTIVGLIF+DGVILGADTRATEGPIVADKNCEKIHY+APNIYCCGAGTAADTEA
Sbjct: 34 SYLKTGTTIVGLIFEDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEA 93
Query: 887 VTDMISSQLTLHRYHTGRESRVVTALSLLKSHLFNYQGHVSAALVLGGVDITGPHLHTIY 708
VTDM+SSQL LHRYHTGRESRVVTAL+LLK HLF YQG+VSAALVLGGVD+TGPHLHTIY
Sbjct: 94 VTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFGYQGYVSAALVLGGVDVTGPHLHTIY 153
Query: 707 PHGSTDTLPYATMGSGSLAAMAIFESKYREGLTRDEGVELVAEAIRSGIFNDLGSGSNVD 528
PHGSTDTLP+ATMGSGSLAAMA+FESKY+EGLTRDEG+ LV EAI SGIFNDLGSGSNVD
Sbjct: 154 PHGSTDTLPFATMGSGSLAAMAVFESKYKEGLTRDEGIRLVTEAICSGIFNDLGSGSNVD 213
Query: 527 ICVLTKGHKEYLRNH 483
+CV+TKG K+YLRNH
Sbjct: 214 VCVITKGQKDYLRNH 228
Score = 51.2 bits (121), Expect(3) = e-112
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -3
Query: 376 KKTEILLTKITPLVEKIEIIEGGDAMEE 293
KKTE+LLTKI PL EK+EIIEGGDAMEE
Sbjct: 246 KKTEVLLTKIMPLKEKVEIIEGGDAMEE 273
Score = 40.8 bits (94), Expect(3) = e-112
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1
Query: 1242 MSKVAIDMPPKGGFSFDLCKRND 1174
MS AID PKGGFSFDLC+RND
Sbjct: 1 MSTSAIDALPKGGFSFDLCRRND 23
>ref|NP_198874.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|30693626|ref|NP_851108.1| proteasome subunit beta
type-7-B [Arabidopsis thaliana]
gi|82581524|sp|Q7DLS1.2|PSB7B_ARATH RecName:
Full=Proteasome subunit beta type-7-B; AltName: Full=20S
proteasome beta subunit B-2; AltName: Full=Proteasome
component FC; AltName: Full=Proteasome subunit beta
type-2; Flags: Precursor gi|3421104|gb|AAC32067.1| 20S
proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit
PBB2 [Arabidopsis thaliana] gi|332007184|gb|AED94567.1|
proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|332007185|gb|AED94568.1| proteasome subunit beta
type-7-B [Arabidopsis thaliana]
Length = 274
Score = 366 bits (940), Expect(3) = e-112
Identities = 176/195 (90%), Positives = 191/195 (97%)
Frame = -2
Query: 1067 SFLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAADTEA 888
SFLKTGTTIVGLIF+DGVILGADTRATEGPIVADKNCEKIHY+APNIYCCGAGTAADTEA
Sbjct: 34 SFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEA 93
Query: 887 VTDMISSQLTLHRYHTGRESRVVTALSLLKSHLFNYQGHVSAALVLGGVDITGPHLHTIY 708
VTDM+SSQL LHRY TGR+SRVVTAL+LLK HLF+YQGHVSAALVLGGVDITGPHLHTIY
Sbjct: 94 VTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
Query: 707 PHGSTDTLPYATMGSGSLAAMAIFESKYREGLTRDEGVELVAEAIRSGIFNDLGSGSNVD 528
PHGSTDTLP+ATMGSGSLAAM++FE+KY+EGLTRDEG++LVAEAI SGIFNDLGSGSNVD
Sbjct: 154 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVD 213
Query: 527 ICVLTKGHKEYLRNH 483
ICV+TKGHKEYLRN+
Sbjct: 214 ICVITKGHKEYLRNY 228
Score = 45.8 bits (107), Expect(3) = e-112
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = -1
Query: 1242 MSKVAIDMPPKGGFSFDLCKRND 1174
MS+ ++D+PPKGGFSFDLCKRND
Sbjct: 1 MSQSSVDIPPKGGFSFDLCKRND 23
Score = 44.7 bits (104), Expect(3) = e-112
Identities = 21/29 (72%), Positives = 27/29 (93%), Gaps = 1/29 (3%)
Frame = -3
Query: 376 KKTEILLTKITPLVEKIEIIE-GGDAMEE 293
KKTE+LLTKITPL+E++EI+E G+AMEE
Sbjct: 246 KKTEVLLTKITPLLERVEIVEVAGEAMEE 274
>ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
lyrata] gi|297321225|gb|EFH51646.1| hypothetical protein
ARALYDRAFT_904988 [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 363 bits (932), Expect(3) = e-112
Identities = 174/195 (89%), Positives = 191/195 (97%)
Frame = -2
Query: 1067 SFLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAADTEA 888
SFLKTGTTIVGLIF+DGVILGADTRATEGPIVADKNCEKIHY+APNIYCCGAGTAADTEA
Sbjct: 34 SFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEA 93
Query: 887 VTDMISSQLTLHRYHTGRESRVVTALSLLKSHLFNYQGHVSAALVLGGVDITGPHLHTIY 708
VTDM+SSQL LHRY TGR+SRV+TAL+LLK HLF+YQGHVSAALVLGGVDITGPHLHTIY
Sbjct: 94 VTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIY 153
Query: 707 PHGSTDTLPYATMGSGSLAAMAIFESKYREGLTRDEGVELVAEAIRSGIFNDLGSGSNVD 528
PHGSTDTLP+ATMGSGSLAAM++FE+KY+EGLTRDEG++LVAEAI SGIFNDLGSGSNVD
Sbjct: 154 PHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVD 213
Query: 527 ICVLTKGHKEYLRNH 483
ICV+TKG+KEYLRN+
Sbjct: 214 ICVITKGNKEYLRNY 228
Score = 47.0 bits (110), Expect(3) = e-112
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = -1
Query: 1242 MSKVAIDMPPKGGFSFDLCKRND 1174
MS+ A+D+PPKGGFSFDLCKRND
Sbjct: 1 MSQSAVDVPPKGGFSFDLCKRND 23
Score = 46.6 bits (109), Expect(3) = e-112
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -3
Query: 376 KKTEILLTKITPLVEKIEIIEGGDAMEE 293
KKTE+LLTKITPL+E++EI E G+AMEE
Sbjct: 246 KKTEVLLTKITPLLERVEITEVGEAMEE 273