BLASTX nr result

ID: Lithospermum22_contig00008066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008066
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321355.1| NAC domain protein, IPR003441 [Populus trich...    65   3e-08
ref|XP_002513765.1| transcription factor, putative [Ricinus comm...    63   2e-07
ref|XP_002323203.1| NAC domain protein, IPR003441 [Populus trich...    59   4e-06

>ref|XP_002321355.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222868351|gb|EEF05482.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 418

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
 Frame = -3

Query: 1162 SYLPIGFRFMPKDEEILCI-LKTKILNEEPSW--SGIQEINLYGVESPWELFNDNYAWES 992
            S LP G++F+P DEE++   L  K+    P+   S  ++ N+YG E PWE+F D +    
Sbjct: 6    SRLPPGYKFLPTDEELIGFYLDRKVNGGLPAEYASLFKDYNIYGEEEPWEIF-DRFEGHK 64

Query: 991  IHDNGXXXXXXXXXKQVLYCFTRLTRAGRNGSKNIVRLCG--CGNWHGETSEKISCDDGL 818
              DNG            LY FT L++   N +KN  R  G   G WHG+  E++S  +G 
Sbjct: 65   SGDNG------------LYFFTTLSKKTVNCTKNKNRKVGKNGGTWHGDGGEEVSTREGA 112

Query: 817  IMKM---FKFKIK---SRDGLVL 767
            ++ M   F++K K   + DG ++
Sbjct: 113  VIGMKNRFRYKNKRQPNHDGWIM 135


>ref|XP_002513765.1| transcription factor, putative [Ricinus communis]
            gi|223546851|gb|EEF48348.1| transcription factor,
            putative [Ricinus communis]
          Length = 363

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 59/189 (31%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
 Frame = -3

Query: 1156 LPIGFRFMPKDEEILCI-LKTKILNEE-PSWSGIQEINLYGVESPWELFNDNYAWESIHD 983
            + +G RF P DEE+L   L  KI N   P+   +++ +LYG   PWE++ D +  +++ D
Sbjct: 7    MQVGVRFRPLDEELLMYYLSHKINNLSLPNPCPVKDCDLYGKNEPWEIW-DYFGGQNLMD 65

Query: 982  NGXXXXXXXXXKQVLYCFTRLTRAGRNGSKNIVRLCGCGNWHGETSEKISCDD------G 821
                        + LY FT+L R   + S+ I+R  G G WHG+TS K   D       G
Sbjct: 66   -----------VEFLYFFTQLKRKSSSSSR-ILRTVGTGTWHGDTSGKPVLDRKTKKVIG 113

Query: 820  LIMKMFKFKIKSRDGLVLDEDAEKYSWLMXXXXXXXXXXXXLNLEWSDYVIC--KITRQE 647
            LI K    K KS         A    WLM               + SD V+C  K+ +  
Sbjct: 114  LIKKFHYKKPKS---------AHNGGWLMREYSLVG--------QSSDCVLCCLKMNKSG 156

Query: 646  EKRGSREQD 620
            EKR   E +
Sbjct: 157  EKRNRLEAE 165


>ref|XP_002323203.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222867833|gb|EEF04964.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 340

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
 Frame = -3

Query: 1153 PIGFRFMPKDEEIL-CILKTKILNEEPSWSG--IQEINLYGVESPWELFNDNYAWESIHD 983
            P GF+F+P +EE++   L  KI           I++ +LYG E PWE+FN  +      D
Sbjct: 9    PPGFKFVPTEEELINYYLYNKIHGRFHGEDATLIKDYDLYGEEEPWEIFN-KFQGHKFGD 67

Query: 982  NGXXXXXXXXXKQVLYCFTRLTRAGRNGSKNIVRLCGC--GNWHGETSEKISCDDGLIM- 812
            NG            LY  T L +   NG KN+ R  G   G WHG+  +++   +G+++ 
Sbjct: 68   NG------------LYFLTTLHKKTTNGIKNMNRSVGTHGGTWHGDGGKEVKSSEGVVIG 115

Query: 811  --KMFKFKIKS---RDGLVLDE 761
              K F++       +DG +L E
Sbjct: 116  TKKRFRYHKHGKPVKDGWILLE 137


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