BLASTX nr result

ID: Lithospermum22_contig00008032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008032
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containin...   308   3e-82
ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containin...   309   1e-81
ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containin...   303   2e-81
ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycin...   306   5e-81
ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80

>ref|XP_002285629.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Vitis vinifera]
          Length = 301

 Score =  308 bits (789), Expect(2) = 3e-82
 Identities = 160/252 (63%), Positives = 184/252 (73%), Gaps = 8/252 (3%)
 Frame = +2

Query: 179 SPSGCQFGETCHFLHYVPGGIKAVTQM--LGNNPALPVPPTNSVAPPFLQDRPSPAAVKT 352
           S SGC FGE CHFLHYVPGGIKAV+QM  LG N  L  P  N   PP   D  SP AVKT
Sbjct: 48  STSGCPFGEGCHFLHYVPGGIKAVSQMVNLGGNTPLAPPARNPAVPPSFPDGSSPPAVKT 107

Query: 353 RLCAKFNTAQGCKFGDKCRFAHGEWELGCPA-PSH-EDPRAMDRMSGRFGSRMEPSPHSG 526
           RLC K+N+A+GCKFGDKC FAHGEWELG P  PSH ED R M   SGR   R+EP P   
Sbjct: 108 RLCNKYNSAEGCKFGDKCHFAHGEWELGKPTLPSHHEDHRGMG--SGRLAGRLEPPPPGL 165

Query: 527 QATSGFGEAVTTKISVDAALVGPILGKSGVNSKQICRLTGVRLSIRDHESNANLKYIELE 706
            A + FG + T KISVDA+L G I+GKSGVNSKQICRLTG +LSI+DH+S+ NL+ IELE
Sbjct: 166 AAAASFGASATAKISVDASLAGAIIGKSGVNSKQICRLTGAKLSIKDHDSDPNLRNIELE 225

Query: 707 GSYDQIKRASQMVEDLIA-IGSSSGLPAKN---SRSNFFTNFKTKMCENFAKGTCTFGER 874
           G++DQIK+AS MV +LI  I S+SG P +N     S    NFKTK+CENF KG+CTFGER
Sbjct: 226 GTFDQIKQASAMVRELIVNISSASGPPMRNPAMQASAAANNFKTKLCENFTKGSCTFGER 285

Query: 875 CHFAHGEEELRQ 910
           CHFAHG +ELR+
Sbjct: 286 CHFAHGADELRK 297



 Score = 25.0 bits (53), Expect(2) = 3e-82
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 69  GRKRGNPDGNGACKKSRQ 122
           GR+ G  +GNG  KKS+Q
Sbjct: 10  GRQEGTLNGNGGFKKSKQ 27


>ref|XP_003536809.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
           [Glycine max]
          Length = 297

 Score =  309 bits (791), Expect = 1e-81
 Identities = 156/255 (61%), Positives = 193/255 (75%), Gaps = 8/255 (3%)
 Frame = +2

Query: 179 SPSGCQFGETCHFLHYVPGGIKAVTQML--GNNPALPVPPTNSVAPPFLQDRPSPAAVKT 352
           S SGC FGE CHFLHYVPGG KAV+Q++  G+NP +P    N V PP   D  SP  VKT
Sbjct: 44  STSGCPFGEGCHFLHYVPGGFKAVSQLINVGSNPVIPQVGRNPV-PPSFPDGSSPPVVKT 102

Query: 353 RLCAKFNTAQGCKFGDKCRFAHGEWELGCP-APSHEDPRAMDRM-SGRFGSRMEPSPHSG 526
           RLC KFNTA+GCKFGDKC FAHGEWELG P APS+EDPR M +M S R G R+EP   + 
Sbjct: 103 RLCNKFNTAEGCKFGDKCHFAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAH 162

Query: 527 QATSGFGEAVTTKISVDAALVGPILGKSGVNSKQICRLTGVRLSIRDHESNANLKYIELE 706
            A + FG + T KIS++A+L G ++GK+GVNSKQICR+TG +LSIRDH+++ NL+ IELE
Sbjct: 163 GAAASFGASATAKISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELE 222

Query: 707 GSYDQIKRASQMVEDLIA-IGSSSGLPAK---NSRSNFFTNFKTKMCENFAKGTCTFGER 874
           GS+DQIK+AS MV ++I  + S+SG P K   +  S   +NFKTK+CENFAKG+CTFGER
Sbjct: 223 GSFDQIKQASAMVHEVILNVSSASGPPMKSFTSQNSAPASNFKTKLCENFAKGSCTFGER 282

Query: 875 CHFAHGEEELRQSSI 919
           CHFAHG +ELR+S +
Sbjct: 283 CHFAHGNDELRKSGM 297


>ref|XP_002273052.1| PREDICTED: zinc finger CCCH domain-containing protein 14 [Vitis
           vinifera] gi|147768909|emb|CAN75883.1| hypothetical
           protein VITISV_024456 [Vitis vinifera]
          Length = 296

 Score =  303 bits (777), Expect(2) = 2e-81
 Identities = 157/250 (62%), Positives = 185/250 (74%), Gaps = 6/250 (2%)
 Frame = +2

Query: 179 SPSGCQFGETCHFLHYVPGGIKAVTQM--LGNNPALPVPPTNSVAPPFLQDRPSPAAVKT 352
           S SGC FGE CHFLHYVPGG  AVTQM  LG NPA+P    N +APP + D   P  VKT
Sbjct: 47  STSGCPFGEGCHFLHYVPGGYSAVTQMTNLGGNPAMPPIARNPMAPPTIPD--GPPTVKT 104

Query: 353 RLCAKFNTAQGCKFGDKCRFAHGEWELGCP-APSHEDPRAMDRMSGRFGSRMEPSPHSGQ 529
           R+C KFNT +GCKFGDKC FAHGE ELG P  P+HEDPRAM  M GR   R+E  P    
Sbjct: 105 RICNKFNTPEGCKFGDKCHFAHGELELGRPIVPTHEDPRAMGPMGGRLAGRLEAPPPGLA 164

Query: 530 ATSGFGEAVTTKISVDAALVGPILGKSGVNSKQICRLTGVRLSIRDHESNANLKYIELEG 709
           A + FG + T KISVDA+L G I+GK GVNSKQICRLTGV+LSI++HES+ N + IELEG
Sbjct: 165 AAASFGASATAKISVDASLAGAIIGKGGVNSKQICRLTGVKLSIKEHESDPNQRNIELEG 224

Query: 710 SYDQIKRASQMVEDLI-AIGSSSGLPAKNSRSNFFT--NFKTKMCENFAKGTCTFGERCH 880
           ++DQIK+AS MV +LI  IGS++G  AKN   +  +  NFKTKMC+NFAKG+CTFG+RCH
Sbjct: 225 TFDQIKQASAMVRELIFNIGSAAG-HAKNPTGSAASANNFKTKMCDNFAKGSCTFGDRCH 283

Query: 881 FAHGEEELRQ 910
           FAHG  ELR+
Sbjct: 284 FAHGANELRK 293



 Score = 26.9 bits (58), Expect(2) = 2e-81
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
 Frame = +3

Query: 60  QMDGRKRGNPDG----NGACKKSRQ 122
           ++ G++RG PDG    NG  KKS+Q
Sbjct: 2   EVGGKRRGRPDGAAFGNGGFKKSKQ 26


>ref|NP_001240135.1| uncharacterized protein LOC100818781 [Glycine max]
           gi|255636715|gb|ACU18693.1| unknown [Glycine max]
          Length = 297

 Score =  306 bits (785), Expect = 5e-81
 Identities = 155/255 (60%), Positives = 192/255 (75%), Gaps = 8/255 (3%)
 Frame = +2

Query: 179 SPSGCQFGETCHFLHYVPGGIKAVTQML--GNNPALPVPPTNSVAPPFLQDRPSPAAVKT 352
           S SGC FGE CHFLHYVPGG KAV+Q++  G+NP  P    N V PP   D  SP  VKT
Sbjct: 44  STSGCPFGEGCHFLHYVPGGFKAVSQLINVGSNPVTPQVGRNPV-PPSFPDGSSPPVVKT 102

Query: 353 RLCAKFNTAQGCKFGDKCRFAHGEWELGCP-APSHEDPRAMDRM-SGRFGSRMEPSPHSG 526
           RLC KFNTA+GCKFGDKC FAHGEWELG P APS+EDPR + +M S R G R+EP   + 
Sbjct: 103 RLCNKFNTAEGCKFGDKCHFAHGEWELGRPTAPSYEDPRVLGQMPSSRVGGRVEPPHPAH 162

Query: 527 QATSGFGEAVTTKISVDAALVGPILGKSGVNSKQICRLTGVRLSIRDHESNANLKYIELE 706
            A + FG + T KIS++A+L G ++GK+GVNSKQICR+TG +LSIRDH+++ NL+ IELE
Sbjct: 163 GAAASFGASATAKISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELE 222

Query: 707 GSYDQIKRASQMVEDLIA-IGSSSGLPAKNSRSNF---FTNFKTKMCENFAKGTCTFGER 874
           GS+DQIK+AS MV ++I  + S+SG P K+  S      +NFKTK+CENFAKG+CTFGER
Sbjct: 223 GSFDQIKQASAMVHEVILNVSSASGPPMKSFTSQTSAPTSNFKTKLCENFAKGSCTFGER 282

Query: 875 CHFAHGEEELRQSSI 919
           CHFAHG +ELR+S +
Sbjct: 283 CHFAHGTDELRKSGM 297


>ref|XP_002299153.1| predicted protein [Populus trichocarpa] gi|222846411|gb|EEE83958.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  304 bits (778), Expect = 3e-80
 Identities = 157/257 (61%), Positives = 186/257 (72%), Gaps = 10/257 (3%)
 Frame = +2

Query: 179 SPSGCQFGETCHFLHYVPGGIKAVTQML--GNNPALPVPPTNSVAPPF-LQDRPSPAAVK 349
           S SGC FGE CHFLHYVPGG KAV+QML  G +PALP    N   P    QDR SP +VK
Sbjct: 49  STSGCPFGEGCHFLHYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVK 108

Query: 350 TRLCAKFNTAQGCKFGDKCRFAHGEWELG--CPAPSHEDPRAMDRMSGRFGSRMEPSPHS 523
           +RLC K+NT +GCKFGDKC FAHGEWELG    APS+EDPRAM  + GR    ME  PH 
Sbjct: 109 SRLCNKYNTVEGCKFGDKCHFAHGEWELGKASAAPSYEDPRAMGPIPGRMSRHME-HPHQ 167

Query: 524 GQ-ATSGFGEAVTTKISVDAALVGPILGKSGVNSKQICRLTGVRLSIRDHESNANLKYIE 700
           G  A + FG + TTKIS+DA+L G I+GK+GVNSK ICR+TG +LSIRDHE++   + IE
Sbjct: 168 GHGAAASFGSSATTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIE 227

Query: 701 LEGSYDQIKRASQMVEDLIA-IGSSSGLPAKNS---RSNFFTNFKTKMCENFAKGTCTFG 868
           LEGS+DQI +AS MV  LI+ +G +SG P KN     S    NFKTK+CENF KG+CTFG
Sbjct: 228 LEGSFDQISQASDMVRQLISNVGQASGPPIKNQAMHSSGGSNNFKTKICENFNKGSCTFG 287

Query: 869 ERCHFAHGEEELRQSSI 919
           +RCHFAHG EELR+S +
Sbjct: 288 DRCHFAHGAEELRKSGM 304


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