BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008029
         (937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297621.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_002324707.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...   215   1e-53
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   213   5e-53

>ref|XP_002297621.1| predicted protein [Populus trichocarpa] gi|222844879|gb|EEE82426.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  218 bits (555), Expect = 2e-54
 Identities = 113/238 (47%), Positives = 152/238 (63%), Gaps = 5/238 (2%)
 Frame = -1

Query: 934 MNHSRETSGLKRKKPEPDVN-RFLTDQDRAVLSAIKKKEDTGMFKGDIKIETKLIDRDLN 758
           M+H +  S LKRK+PE +   + LT+ +R +   I+ K+D G++  D+K E KL D  +N
Sbjct: 1   MSHVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60

Query: 757 KALKNLESHNLXXXXXXXXXXXXKHYVAVEFKPSKEISGGVWYKDGNLDTEHIQKLKYLC 578
           K+LK L   NL            KH++A EF+PSKEISGG WY +G+LDTE I+ L+ LC
Sbjct: 61  KSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLC 120

Query: 577 S--IVTKKAATLDAIHDLLKKRA--EPDLKKEQVSEILTSMVLSNELIEVKSTGYGEFHS 410
              I  K  ATL+ + D +        D+ K+Q+ EIL +++L N ++EVKS G GEF S
Sbjct: 121 KRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFAS 180

Query: 409 IPIGTLCYKVASAAGIDKGPKVGAMASIPCGACPRISKCTPDGLISPSTCVYFTKWLD 236
           IP G +CY+  S   +   PK GA+ASIPCG CPRIS CTPDG+ISP TCVY+ KWLD
Sbjct: 181 IPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLD 238


>ref|XP_002324707.1| predicted protein [Populus trichocarpa] gi|222866141|gb|EEF03272.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  218 bits (554), Expect = 2e-54
 Identities = 113/238 (47%), Positives = 153/238 (64%), Gaps = 5/238 (2%)
 Frame = -1

Query: 934 MNHSRETSGLKRKKPEPDVN-RFLTDQDRAVLSAIKKKEDTGMFKGDIKIETKLIDRDLN 758
           M+  +  S LKRK+PE +   + LT+ +R +   I+ K+D G++  D+K E KL D  +N
Sbjct: 1   MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60

Query: 757 KALKNLESHNLXXXXXXXXXXXXKHYVAVEFKPSKEISGGVWYKDGNLDTEHIQKLKYLC 578
           K+LK L+   L            KH++A EF+PSKEISGG WY +G+LDTE I+ LK LC
Sbjct: 61  KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120

Query: 577 S--IVTKKAATLDAIHDLLKKRA--EPDLKKEQVSEILTSMVLSNELIEVKSTGYGEFHS 410
              I  +  ATL+ + D +        D+ K+Q+ EIL +++L N ++EVKS G GEF S
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180

Query: 409 IPIGTLCYKVASAAGIDKGPKVGAMASIPCGACPRISKCTPDGLISPSTCVYFTKWLD 236
           IP G +CYK  S  G+   PK GA+ASIPCG CPRIS+CTPDG+ISP TCVY+ KWLD
Sbjct: 181 IPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLD 238


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score =  215 bits (547), Expect = 1e-53
 Identities = 115/238 (48%), Positives = 155/238 (65%), Gaps = 5/238 (2%)
 Frame = -1

Query: 934 MNHSRETSGLKRKKPEPDVN-RFLTDQDRAVLSAIKKKEDTGMFKGDIKIETKLIDRDLN 758
           MN S+    LKRK+PE     + LT+ +  + + I  K+D G++  D+K ET L D  +N
Sbjct: 1   MNRSQ---ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVN 57

Query: 757 KALKNLESHNLXXXXXXXXXXXXKHYVAVEFKPSKEISGGVWYKDGNLDTEHIQKLKYLC 578
           K+LK L++ NL            KHY+A EF+PSKEI+GG WY +GNLDTE I+ LK +C
Sbjct: 58  KSLKVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVC 117

Query: 577 S--IVTKKAATLDAIHDLLKKRA--EPDLKKEQVSEILTSMVLSNELIEVKSTGYGEFHS 410
           +  ++  K ATL+ I D +K+      +L K+Q+ EI+ ++VL N LIEVKS G  EF  
Sbjct: 118 TKQVLKLKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSF 177

Query: 409 IPIGTLCYKVASAAGIDKGPKVGAMASIPCGACPRISKCTPDGLISPSTCVYFTKWLD 236
           IPIG +CYK          P++GAMASIPCG CPRIS+CTPDG+ISP TCVY++KWLD
Sbjct: 178 IPIGKVCYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLD 235


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  214 bits (546), Expect = 2e-53
 Identities = 113/240 (47%), Positives = 159/240 (66%), Gaps = 6/240 (2%)
 Frame = -1

Query: 937 GMNHSRETSGLKRKKPEPDV-NRFLTDQDRAVLSAIKKKEDTGMFKGDIKIETKLIDRDL 761
           GM+ S+ +S LKRK+P+ +  ++ L D +R +   I+ KED G++  D+K ET L D  +
Sbjct: 61  GMSRSQGSS-LKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 119

Query: 760 NKALKNLESHNLXXXXXXXXXXXXKHYVAVEFKPSKEISGGVWYKDGNLDTEHIQKLKYL 581
            K+LK L+   L            KHY+AVEF+PSKE++GG WY +GNLDTE+I+ LK  
Sbjct: 120 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179

Query: 580 CSIVTK--KAATLDAIHDLLKKR--AEPDLKKEQVSEILTSMVLSNELIEVKSTGYGEFH 413
           C  V    K AT + I + + K      +   +Q++EIL ++VL NE++EV+S+G GEF 
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 239

Query: 412 SIPIGTLCYKVASAAGI-DKGPKVGAMASIPCGACPRISKCTPDGLISPSTCVYFTKWLD 236
           SIPIG +CY+  +  G+   GP +GAMASIPCG CPRI++CTPDG+ISP TC Y+TKWLD
Sbjct: 240 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 299


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  213 bits (542), Expect = 5e-53
 Identities = 110/232 (47%), Positives = 153/232 (65%), Gaps = 6/232 (2%)
 Frame = -1

Query: 913 SGLKRKKPEPDV-NRFLTDQDRAVLSAIKKKEDTGMFKGDIKIETKLIDRDLNKALKNLE 737
           S LKRK+P+ +  ++ L D +R +   I+ KED G++  D+K ET L D  + K+LK L+
Sbjct: 7   SSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66

Query: 736 SHNLXXXXXXXXXXXXKHYVAVEFKPSKEISGGVWYKDGNLDTEHIQKLKYLCSIVTK-- 563
              L            KHY+AVEF+PSKE++GG WY +GNLDTE+I+ LK  C  V    
Sbjct: 67  VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKL 126

Query: 562 KAATLDAIHDLLKKR--AEPDLKKEQVSEILTSMVLSNELIEVKSTGYGEFHSIPIGTLC 389
           K AT + I + + K      +   +Q++EIL ++VL NE++EV+S+G GEF SIPIG +C
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186

Query: 388 YKVASAAGI-DKGPKVGAMASIPCGACPRISKCTPDGLISPSTCVYFTKWLD 236
           Y+  +  G+   GP +GAMASIPCG CPRI++CTPDG+ISP TC Y+TKWLD
Sbjct: 187 YRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238