BLASTX nr result

ID: Lithospermum22_contig00008026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008026
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit ...   297   1e-91
gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]            332   1e-88
gb|AFK41427.1| unknown [Medicago truncatula]                          286   1e-88
ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit ...   285   6e-88
ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit ...   328   1e-87

>ref|XP_002273686.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 1 [Vitis
            vinifera] gi|297734611|emb|CBI16662.3| unnamed protein
            product [Vitis vinifera]
          Length = 259

 Score =  297 bits (761), Expect(2) = 1e-91
 Identities = 147/202 (72%), Positives = 170/202 (84%)
 Frame = -1

Query: 1048 MDIERRQAEQIEVIVKQASSLNGSALSNIILAATSHPSLFAFSEILSLPNFLQLEGRDGS 869
            MDIE+RQAE I+  VKQAS+ NGSAL+ +IL ATSHPSLFAFSEIL++PN ++L G + S
Sbjct: 1    MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 868  MYLDLLRLFAHGTWSDYKSDADRLPHLVADXXXXXXXXXXXXLAETNKILPYDMLMRELD 689
            +YLD+LRLFAHGTWSDYKS+ DRLP LV D            LAETNK+LPYD LM+ELD
Sbjct: 61   VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120

Query: 688  VSNVRELEDFLINECMYVGIVRGKLDQWRRCFEVQFAAGRDLRPGQMGSMIDTLDNWLTT 509
            V+NVRELEDFLINECMY GIVRGKLDQ RRCFEVQFAAGRDLRPGQ+G MI TL NWL T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180

Query: 508  SENLLVTIQDKIKWADSMSQLD 443
            S+NLL++IQ+KIKWAD+MS+LD
Sbjct: 181  SDNLLLSIQEKIKWADTMSELD 202



 Score = 67.0 bits (162), Expect(2) = 1e-91
 Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = -3

Query: 416 KSGRNEEHSFLQEVTNC--EQADVDFRGHEEIFAESGGVMDHEEDRTRPKRRRQPL 255
           K  R E    ++EV      +AD+DFRGHEEI++E GGVMD+EEDR+RPKRRR P+
Sbjct: 203 KKHRKEVEERVEEVKKSFSVKADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258


>gb|AEB71560.1| COP9 complex subunit 7a [Solanum chacoense]
          Length = 247

 Score =  332 bits (851), Expect = 1e-88
 Identities = 170/247 (68%), Positives = 201/247 (81%)
 Frame = -1

Query: 1048 MDIERRQAEQIEVIVKQASSLNGSALSNIILAATSHPSLFAFSEILSLPNFLQLEGRDGS 869
            MDIE++QAE IE  VKQAS+L GSAL+++I+ ATSHPSLFAFSEILS+P+ L+LEG + S
Sbjct: 1    MDIEQKQAEHIEFFVKQASALKGSALTSVIVEATSHPSLFAFSEILSVPSVLELEGTENS 60

Query: 868  MYLDLLRLFAHGTWSDYKSDADRLPHLVADXXXXXXXXXXXXLAETNKILPYDMLMRELD 689
            +YLDLLRLFAHGTWSDYKS A RLP LV+             LA+T+K+LPYD LM+ELD
Sbjct: 61   VYLDLLRLFAHGTWSDYKSIACRLPQLVSAQALKLKQLTVLTLADTSKVLPYDQLMQELD 120

Query: 688  VSNVRELEDFLINECMYVGIVRGKLDQWRRCFEVQFAAGRDLRPGQMGSMIDTLDNWLTT 509
            V+NVRELEDFLINECMYVGIVRGKLDQ +RCFEVQFAAGRDLRPGQ+G+M+ TL +WLTT
Sbjct: 121  VTNVRELEDFLINECMYVGIVRGKLDQLKRCFEVQFAAGRDLRPGQLGNMLQTLTDWLTT 180

Query: 508  SENLLVTIQDKIKWADSMSQLDXXXXXXXXXXXXXMKNTLSFKKLQTVSRPMLTSEGMRR 329
            S+NLLV+IQ+KIKWAD+MS+ D             +K +LS KKLQTVSRPMLTSEGMRR
Sbjct: 181  SDNLLVSIQEKIKWADTMSESDRKHRKEVEERVDEVKKSLSLKKLQTVSRPMLTSEGMRR 240

Query: 328  SLQSLVE 308
            S  +LVE
Sbjct: 241  STLNLVE 247


>gb|AFK41427.1| unknown [Medicago truncatula]
          Length = 259

 Score =  286 bits (733), Expect(2) = 1e-88
 Identities = 146/203 (71%), Positives = 166/203 (81%), Gaps = 1/203 (0%)
 Frame = -1

Query: 1048 MDIERRQAEQIEVIVKQASSL-NGSALSNIILAATSHPSLFAFSEILSLPNFLQLEGRDG 872
            MDIE+RQ+E I+  VKQAS+  N SA+S++I+ ATSHP LFAFSEIL+LPN LQLE  D 
Sbjct: 1    MDIEQRQSELIDQFVKQASAASNTSAISSVIVDATSHPLLFAFSEILALPNVLQLEATDE 60

Query: 871  SMYLDLLRLFAHGTWSDYKSDADRLPHLVADXXXXXXXXXXXXLAETNKILPYDMLMREL 692
              YLDLLRLFAHG WSDYKS+ADRLP LV D            L ET K+LPYD LM+EL
Sbjct: 61   EFYLDLLRLFAHGIWSDYKSNADRLPQLVPDQILKLKQLTVLTLVETYKVLPYDQLMQEL 120

Query: 691  DVSNVRELEDFLINECMYVGIVRGKLDQWRRCFEVQFAAGRDLRPGQMGSMIDTLDNWLT 512
            DV+NVRELEDFLINECMY GIVRGKLDQ RRCFEVQFAAGRDLRPGQ+G MI TL +WL+
Sbjct: 121  DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGDMIQTLSDWLS 180

Query: 511  TSENLLVTIQDKIKWADSMSQLD 443
            TSEN+LV+IQDKIKWADSMS++D
Sbjct: 181  TSENMLVSIQDKIKWADSMSEVD 203



 Score = 67.8 bits (164), Expect(2) = 1e-88
 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = -3

Query: 416 KSGRNEEHSFLQEVT-NCEQADVDFRGHEEIFAESGGVMDHEEDRTRPKRRRQPL 255
           K  R E    + EV  +  +AD+DFRGHEEI AESGGVMD+EEDR+RPKRRR P+
Sbjct: 204 KKHRKEVEEKVDEVKKSIFKADIDFRGHEEICAESGGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003546686.1| PREDICTED: COP9 signalosome complex subunit 7-like [Glycine max]
          Length = 259

 Score =  285 bits (728), Expect(2) = 6e-88
 Identities = 141/203 (69%), Positives = 171/203 (84%), Gaps = 1/203 (0%)
 Frame = -1

Query: 1048 MDIERRQAEQIEVIVKQASSLN-GSALSNIILAATSHPSLFAFSEILSLPNFLQLEGRDG 872
            MDIE++Q+E I+  VK+AS+ +  +AL+++++ ATSHPSLFAFSEIL+LPN LQLE  + 
Sbjct: 1    MDIEQKQSELIDHFVKRASAASDAAALASVLVEATSHPSLFAFSEILALPNLLQLEATEN 60

Query: 871  SMYLDLLRLFAHGTWSDYKSDADRLPHLVADXXXXXXXXXXXXLAETNKILPYDMLMREL 692
            S YLD+LRLFAHGTWSDYKS+ADRLP L++D            LAET K+LPYD LM+EL
Sbjct: 61   SAYLDMLRLFAHGTWSDYKSNADRLPQLISDQILKLKQLTVLTLAETYKVLPYDQLMQEL 120

Query: 691  DVSNVRELEDFLINECMYVGIVRGKLDQWRRCFEVQFAAGRDLRPGQMGSMIDTLDNWLT 512
            DV+NVRELEDFLINECMY GIVRGKLDQ RRCFEVQFAAGRDLRP Q+G+MI TL +WLT
Sbjct: 121  DVTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPDQLGNMIQTLSSWLT 180

Query: 511  TSENLLVTIQDKIKWADSMSQLD 443
            TSENLLV+IQ+KIKWAD+MS++D
Sbjct: 181  TSENLLVSIQEKIKWADAMSEID 203



 Score = 67.4 bits (163), Expect(2) = 6e-88
 Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = -3

Query: 416 KSGRNEEHSFLQEVT-NCEQADVDFRGHEEIFAESGGVMDHEEDRTRPKRRRQPL 255
           K  R E    ++EV  +  +AD+DFRGHEEI +ESGGVMD+EEDR+RPKRRR P+
Sbjct: 204 KKHRKEVEEKVEEVKKSIFKADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 258


>ref|XP_003633896.1| PREDICTED: COP9 signalosome complex subunit 7 isoform 2 [Vitis
            vinifera]
          Length = 247

 Score =  328 bits (842), Expect = 1e-87
 Identities = 168/247 (68%), Positives = 194/247 (78%)
 Frame = -1

Query: 1048 MDIERRQAEQIEVIVKQASSLNGSALSNIILAATSHPSLFAFSEILSLPNFLQLEGRDGS 869
            MDIE+RQAE I+  VKQAS+ NGSAL+ +IL ATSHPSLFAFSEIL++PN ++L G + S
Sbjct: 1    MDIEQRQAELIDAFVKQASTHNGSALATVILDATSHPSLFAFSEILAVPNVVELGGTENS 60

Query: 868  MYLDLLRLFAHGTWSDYKSDADRLPHLVADXXXXXXXXXXXXLAETNKILPYDMLMRELD 689
            +YLD+LRLFAHGTWSDYKS+ DRLP LV D            LAETNK+LPYD LM+ELD
Sbjct: 61   VYLDMLRLFAHGTWSDYKSNVDRLPQLVPDQALKLKQLTVLTLAETNKVLPYDQLMQELD 120

Query: 688  VSNVRELEDFLINECMYVGIVRGKLDQWRRCFEVQFAAGRDLRPGQMGSMIDTLDNWLTT 509
            V+NVRELEDFLINECMY GIVRGKLDQ RRCFEVQFAAGRDLRPGQ+G MI TL NWL T
Sbjct: 121  VTNVRELEDFLINECMYAGIVRGKLDQLRRCFEVQFAAGRDLRPGQLGCMIQTLSNWLGT 180

Query: 508  SENLLVTIQDKIKWADSMSQLDXXXXXXXXXXXXXMKNTLSFKKLQTVSRPMLTSEGMRR 329
            S+NLL++IQ+KIKWAD+MS+LD             +K + S KKL TVSRP LTSEG RR
Sbjct: 181  SDNLLLSIQEKIKWADTMSELDKKHRKEVEERVEEVKKSFSVKKLHTVSRPTLTSEGTRR 240

Query: 328  SLQSLVE 308
            S  +LVE
Sbjct: 241  STLNLVE 247


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