BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00008002
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302374.1| predicted protein [Populus trichocarpa] gi|1...   101   2e-19
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi...   100   4e-19
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab...   100   5e-19
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c...    98   2e-18
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl...    97   4e-18

>ref|XP_002302374.1| predicted protein [Populus trichocarpa] gi|118486925|gb|ABK95296.1|
           unknown [Populus trichocarpa]
           gi|222844100|gb|EEE81647.1| predicted protein [Populus
           trichocarpa]
          Length = 123

 Score =  101 bits (251), Expect = 2e-19
 Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
 Frame = -3

Query: 597 MSVSAIFGTRLVAPPQTATISTSK--------APPSLSFNGGGGLVVECSSRPQKKATAH 442
           MSVS+IFG+  +  P+ +T  + K         P    F G GG+ +ECSSRPQKKATAH
Sbjct: 1   MSVSSIFGSPFLLAPKPSTTPSFKPVNGEFKTVPIGTGF-GHGGMSIECSSRPQKKATAH 59

Query: 441 HKKTRPRKTQKWDIKRGPTVYAXXXXXXPEWTLLAQQNSAGGDAD 307
           H+KTRPRK+Q WDIKR PTVYA      P+WTL++      GD D
Sbjct: 60  HRKTRPRKSQPWDIKRKPTVYAPLPPLPPDWTLVSSSGDGDGDGD 104


>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
           gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
           ribosomal protein 6, chloroplastic; AltName: Full=CL25;
           AltName: Full=Plastid-specific 50S ribosomal protein 6;
           Short=PSRP-6; Flags: Precursor
           gi|10177888|dbj|BAB11220.1| unnamed protein product
           [Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
           AT5g17870/MPI7_10 [Arabidopsis thaliana]
           gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
           [Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
           plastid-specific ribosomal protein 6 precursor
           (Psrp-6)-like [Arabidopsis thaliana]
           gi|332005097|gb|AED92480.1| plastid-specific 50S
           ribosomal protein 6 [Arabidopsis thaliana]
          Length = 106

 Score =  100 bits (248), Expect = 4e-19
 Identities = 51/96 (53%), Positives = 62/96 (64%)
 Frame = -3

Query: 597 MSVSAIFGTRLVAPPQTATISTSKAPPSLSFNGGGGLVVECSSRPQKKATAHHKKTRPRK 418
           MSVSAIFGT +V    +  +   + P  L   GG G+V+ECSSRPQKK+TAHH+KTRP+K
Sbjct: 1   MSVSAIFGTGIVTVAASPVLRQFQVP-KLGNGGGLGMVIECSSRPQKKSTAHHRKTRPKK 59

Query: 417 TQKWDIKRGPTVYAXXXXXXPEWTLLAQQNSAGGDA 310
           TQ WDIKR PTVYA       EW+     +  GG A
Sbjct: 60  TQPWDIKRKPTVYAPLPPLPAEWSPFTLASDDGGAA 95


>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
           lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
           ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 50/94 (53%), Positives = 62/94 (65%)
 Frame = -3

Query: 597 MSVSAIFGTRLVAPPQTATISTSKAPPSLSFNGGGGLVVECSSRPQKKATAHHKKTRPRK 418
           MSVSAIFGT +V    +  +   + P +L   GG G+V+ECSSRPQKK+TAHH+K+RP+K
Sbjct: 1   MSVSAIFGTGIVTVAASPVLRQFQVP-TLGNGGGLGMVIECSSRPQKKSTAHHRKSRPKK 59

Query: 417 TQKWDIKRGPTVYAXXXXXXPEWTLLAQQNSAGG 316
           TQ WDIKR PTVYA       EWT     +  GG
Sbjct: 60  TQPWDIKRKPTVYAPLPPLPAEWTPFTLASDDGG 93


>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
           Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
           protein 6; Short=PSRP-6; Flags: Precursor
           gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
           ribosomal protein 6 precursor [Spinacia oleracea]
          Length = 116

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
 Frame = -3

Query: 597 MSVSAIFGTRLVAPPQTATIS-----TSKAPPSLSFNGGGGLV-VECSSRPQKKATAHHK 436
           MSVSAIFG R+V  P     S     T K  PS   + GGG++ +ECSSRPQKK TAHH 
Sbjct: 1   MSVSAIFGARVVTIPSVLRTSSVDGRTVKLQPSTGGSCGGGVITIECSSRPQKKGTAHHM 60

Query: 435 KTRPRKTQKWDIKRGPTVYAXXXXXXPEWTLLAQQNSAGGDAD 307
           KTRP+KT +WDIKRGP VY        EWT++   +SA  +AD
Sbjct: 61  KTRPKKTARWDIKRGPAVYPPLPPLPAEWTIV---SSAVDEAD 100


>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
          Length = 108

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 53/97 (54%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = -3

Query: 597 MSVSAIFGTRLVAPPQTA-TISTSKAPPSLSFNGGGGLVVECSSRPQKKATAHHKKTRPR 421
           MS+SAIFG  +     TA +    KA P L   GGG  V+ECSSRPQKK T+HH KTRPR
Sbjct: 1   MSISAIFGAAVPNRCSTAASFGARKAAPRL---GGGAAVIECSSRPQKKGTSHHMKTRPR 57

Query: 420 KTQKWDIKRGPTVYAXXXXXXPEWTLLAQQNSAGGDA 310
           KTQ WDIKR PTVYA      PEWT+++    A   A
Sbjct: 58  KTQPWDIKRRPTVYAPLPPLPPEWTVVSSDADASDAA 94