BLASTX nr result
ID: Lithospermum22_contig00007976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00007976
(2900 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1024 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 1006 0.0
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 1000 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 993 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 987 0.0
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 1024 bits (2648), Expect = 0.0
Identities = 562/905 (62%), Positives = 643/905 (71%), Gaps = 39/905 (4%)
Frame = -3
Query: 2898 NLMEDY-EHHQPVVFKXXXXXXXXXXSNTESYKSSSQKPDGQPGRQASDVCXXXXXXXXX 2722
NL +D E +P+VFK +N+E+ K SSQK DGQ RQ D
Sbjct: 10 NLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSRPANGESSSG 69
Query: 2721 XXGTTIXXXXXXXXXSPL---PGMRTXXXXXXXXXXXXXXPTVTSPMSDHGNRMSPGLAG 2551
G + SPL P + SP+S P +G
Sbjct: 70 QKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLPANSKPSTSG 129
Query: 2550 -------------TIVKEEKSSAEPSKTA--NGDSDSEDEVPLSMRTKSRSVNSSKTPQG 2416
T++KEEKSS +A N DS+D PLS+R S S + T Q
Sbjct: 130 SFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR-HSASSSKGNTNQV 188
Query: 2415 SNSTSRLSAPKQEESDDDKPLSNF--KRATNGASSSNYSDSEDEKPLAKRRQQNGLA--- 2251
S S+ P+ E+SDD+KPLS+ ++ G S+S DS+D+KPLAK+ Q NG A
Sbjct: 189 SKEGSK---PENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRD 245
Query: 2250 --PTKKSSVGSDKRPSTDSKSSVQSLIKRPKLSNASTSRNLKPASVKAEPKVVEDND-HI 2080
P K S++ S+KRP D KSS Q +K+PKLS+ + N K ASVK EPK +D+D H+
Sbjct: 246 GQPNKYSNM-SNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHL 304
Query: 2079 PVSQRIKLS----GSSTSVGKKYXXXXXXXXXXXXXXXXXXXXXKYE------PSSSGGQ 1930
P+SQRIK S S+S+ K KY PSS G+
Sbjct: 305 PISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGK 364
Query: 1929 KWTTLVHNGVIFPPPYQPHGVKMLYKGKPVDLTPGQEEVATMYAVMLDTDYISKPQFREN 1750
KW L HNGVIFPPPY+PHG+KMLYKGKPVDLTP QEEVATM+AVMLDTDY++KP+F+EN
Sbjct: 365 KWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKEN 424
Query: 1749 FFNDWKKILGKNHVIQNLEDCDFTPMYEWHQAEKEKKKQRSSDEKKAINEEKMKLEEKYK 1570
FF DWKKILGKNHVIQNLE+CDF+P+YEWHQ+EKEKKKQ +++EKKA+ EEK+K EEKY
Sbjct: 425 FFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYM 484
Query: 1569 WAIVDGVKEKVGSFRVEPPGLFRGRGEHPKVGKLKKRIRPSDITINIGKGAPIPECPVPG 1390
WA VDG KEKVG+FRVEPPGLFRGRGEHPK+GKLKKRIRP DITINIGK APIPECPVPG
Sbjct: 485 WAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPG 544
Query: 1389 ERWKEVRNDNTVTWLAYWMDPINSKEFKYVFLAPSSALKGQSDKEKYEKARKLTVHIDKI 1210
ERWKEVR+DNTVTWLA+W DPIN KEFKYVFLA SS LKG SDKEKYEKAR L +I I
Sbjct: 545 ERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGI 604
Query: 1209 REAYTKNFTSKDATKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 1030
R AYTK+F SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN
Sbjct: 605 RAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPN 664
Query: 1029 TLEFDFLGKDSIRYHNVVEVELPVFEAIQKFRKGKKGGDNLFDMLDTSKLNAHLKELVPG 850
L+FDFLGKDSIRY N VEVE VF+AIQ+FR GK+G +LFD+LDTSKLNAHLKEL+PG
Sbjct: 665 ILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPG 724
Query: 849 LTAKVFRTYNASKTLDDLLSAETNVGDVAENIVVYQHANKEVAIICNHQRTVSKSHDQQM 670
LTAKVFRTYNAS TLDD+LS ET GDVAE +VVYQHANKEVAIICNHQRTVSKSH QM
Sbjct: 725 LTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQM 784
Query: 669 ERLDEKIKXXXXXXXXXXXXXDRAKKGKPPL--KGTDGKTKRNLAPEALEKKIAQTHLRI 496
RL+EKI+ R KKGKPPL K DGK KRNL PE+LEKKIAQT+ +I
Sbjct: 785 LRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKI 844
Query: 495 EKMERDKSTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPMEKIFNKSLLAKFSWAMDV 316
EKMERDK TKEDLKTVALGTSKINYLDPRITVAWCKRHEVP+EKIFNKSLLAKF+WAMDV
Sbjct: 845 EKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 904
Query: 315 EPSFR 301
+PSFR
Sbjct: 905 DPSFR 909
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 1006 bits (2601), Expect = 0.0
Identities = 556/927 (59%), Positives = 641/927 (69%), Gaps = 61/927 (6%)
Frame = -3
Query: 2898 NLMEDYEHHQ-PVVFKXXXXXXXXXXSNTESYKSSSQKPDGQPGRQASDVCXXXXXXXXX 2722
NLMED E PV+FK +N+E K S QK DGQ SDV
Sbjct: 9 NLMEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVRPANGESSSA 68
Query: 2721 XXGTTIXXXXXXXXXSPLPGMRTXXXXXXXXXXXXXXPTVTSPMSDHGNRMSPGLAGTIV 2542
G SPL + SP++ G P + T
Sbjct: 69 QKGRIQPSAKTPPVKSPLSSPKASNSSAK-----------ASPITSPGANSKPSASATST 117
Query: 2541 KEE----KSSAE--------PSKTANGDSDS-EDEVPLSMRT-----KSRSVNSSKTPQG 2416
++ KSSA P+ AN +S+S +DE PLS RT K +S +++K
Sbjct: 118 AKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGD 177
Query: 2415 SNSTSRLSAPKQEESDDDKPLSN--FKRATNGASSSNYSDSEDEKPLAKRRQQNGLA--- 2251
S S R + E+S+D+KPLS +++ G S+S DS+++KPLA + QQNG A
Sbjct: 178 SCSIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRD 237
Query: 2250 -PTKKSSVGSDKRPSTDSKSSVQSLIKRPKLSNASTSRNLKPASVKAEPKVVEDNDHIPV 2074
P KS+ S+KRP ++KS QS +K+PKLS+ TS + K A+VK EPK +D+D+IP+
Sbjct: 238 GPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPL 297
Query: 2073 SQRIK-----------------------------LSGSSTSVGKKYXXXXXXXXXXXXXX 1981
SQR K +S SS V K
Sbjct: 298 SQRGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNS 357
Query: 1980 XXXXXXXKYE------PSSSGGQKWTTLVHNGVIFPPPYQPHGVKMLYKGKPVDLTPGQE 1819
Y P S GQKWTTLVHNGVIFPPPY+PHGVKMLYK +P+ LTP QE
Sbjct: 358 KKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQE 417
Query: 1818 EVATMYAVMLDTDYISKPQFRENFFNDWKKILGKNHVIQNLEDCDFTPMYEWHQAEKEKK 1639
EVATM+AVMLDTDY++KP F+ENFF+DWKKILGKNH+IQNLEDCDF P+YEWHQ EKEKK
Sbjct: 418 EVATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKK 477
Query: 1638 KQRSSDEKKAINEEKMKLEEKYKWAIVDGVKEKVGSFRVEPPGLFRGRGEHPKVGKLKKR 1459
KQ +++EKKA+ EEK++ EEKY WAIVDGVKEKVG+FRVEPPGLFRGRGEHPK+GKLKKR
Sbjct: 478 KQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 537
Query: 1458 IRPSDITINIGKGAPIPECPVPGERWKEVRNDNTVTWLAYWMDPINSKEFKYVFLAPSSA 1279
IRP DITINIGK APIPECP+PGERWKEVRN NTVTWLAYW DPIN KEFKYVFLA SS
Sbjct: 538 IRPRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASST 597
Query: 1278 LKGQSDKEKYEKARKLTVHIDKIREAYTKNFTS-KDATKQQIAVATYLIDKLALRAGNEK 1102
LKGQSDKEKYEKAR L +I IR AYTK+FT+ KD K+QIAVATYLIDKLALRAGNEK
Sbjct: 598 LKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 657
Query: 1101 DDDEADTVGCCTLKVENVEPVPPNTLEFDFLGKDSIRYHNVVEVELPVFEAIQKFRKGKK 922
DDDEADTVGCCTLKVENVEPVPPN L+FDFLGKDSIRY N V+VE VF+AIQ+FR GK+
Sbjct: 658 DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKE 717
Query: 921 GGDNLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASKTLDDLLSAETNVGDVAENIVVYQ 742
G ++LFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+LS ET G+VAEN+VVYQ
Sbjct: 718 GSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQ 777
Query: 741 HANKEVAIICNHQRTVSKSHDQQMERLDEKIKXXXXXXXXXXXXXDRAKKGKPPLKGTDG 562
HANKEVAIICNHQRTVSKSH QM RL+EKI RAKKGKPP KG DG
Sbjct: 778 HANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADG 837
Query: 561 KTKRNLAPEALEKKIAQTHLRIEKMERDKSTKEDLKTVALGTSKINYLDPRITVAWCKRH 382
K KRNL PEALE+KI QT+ +IEKMERDK TKEDLKTVALGTSKINYLDPRITVAWCKRH
Sbjct: 838 KAKRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRH 897
Query: 381 EVPMEKIFNKSLLAKFSWAMDVEPSFR 301
EVP+EKIFNKSLLAKF+W+MDV+PSFR
Sbjct: 898 EVPIEKIFNKSLLAKFAWSMDVDPSFR 924
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 1000 bits (2585), Expect = 0.0
Identities = 545/886 (61%), Positives = 627/886 (70%), Gaps = 26/886 (2%)
Frame = -3
Query: 2880 EHHQPVVFKXXXXXXXXXXSNTESYKSSSQKPDGQPGRQASDVCXXXXXXXXXXXGTTIX 2701
E +P+VFK N+++ K SSQ+ DGQ GRQ SDV G T
Sbjct: 17 EDDEPLVFKRSNATSKHNQLNSDT-KKSSQRYDGQSGRQVSDVPSTNGQSSSASKGKTTK 75
Query: 2700 XXXXXXXXSPLPGMRTXXXXXXXXXXXXXXPTVTSPMSDHGNRMSPGLAGTIVKEEKSSA 2521
P P V+S D S +VKEEK
Sbjct: 76 LSSMKS-----PIASPKASTSFAKASPVANPKVSSSSDDRSKHSSKQNTINVVKEEKELV 130
Query: 2520 EPSKTANGDSDSEDEVPLSMR-----TKSRSVNSSKTPQGSNSTSRLSAPKQE------E 2374
P+ GDS EDE PLS R TK S N++K S+ S L PK E +
Sbjct: 131 NPAAEPYGDS--EDEKPLSARLFTGLTKGSSNNANKGLINSSPAS-LPVPKPEINRYSDD 187
Query: 2373 SDDDKPLSNFKR--ATNGASSSNYSDSEDEKPLAKRRQQNG-LAPTKKSSVGSDKRPSTD 2203
SDD+ PLS+ R A G S+ +S+D K L QQNG + KSS+ +KRP +
Sbjct: 188 SDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGSKSSIKVNKRPLGE 247
Query: 2202 SKSSVQSLIKRPKLSNASTSRNLKPASVKAEPKVVE-DNDHIPVSQRIKLSGSS------ 2044
KSSVQS +K+PKLS+AST N K AS KAEPK + D+DH+P+SQR+K S +S
Sbjct: 248 VKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRMKKSATSGNKSST 307
Query: 2043 -----TSVGKKYXXXXXXXXXXXXXXXXXXXXXKYEPSSSGGQKWTTLVHNGVIFPPPYQ 1879
T V K PSS G+KW TLVHNGVIFPPPY+
Sbjct: 308 AKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKWNTLVHNGVIFPPPYK 367
Query: 1878 PHGVKMLYKGKPVDLTPGQEEVATMYAVMLDTDYISKPQFRENFFNDWKKILGKNHVIQN 1699
PHGVKMLYKGKPVDLTP QEEVATM+AVMLDTDY++K +F+ENF +DW+KILGKNHVIQN
Sbjct: 368 PHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENFMDDWRKILGKNHVIQN 427
Query: 1698 LEDCDFTPMYEWHQAEKEKKKQRSSDEKKAINEEKMKLEEKYKWAIVDGVKEKVGSFRVE 1519
LEDCDFTP+YEWHQ EKEKKK+ +++EKK + EE++K EEKY WAIV+GVKEKVG+FRVE
Sbjct: 428 LEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMWAIVNGVKEKVGNFRVE 487
Query: 1518 PPGLFRGRGEHPKVGKLKKRIRPSDITINIGKGAPIPECPVPGERWKEVRNDNTVTWLAY 1339
PP LFRGRGEHPK+GKLKK IRPSDITINIGK APIPECP+PGE WKE+R+DNTVTWLA+
Sbjct: 488 PPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAF 547
Query: 1338 WMDPINSKEFKYVFLAPSSALKGQSDKEKYEKARKLTVHIDKIREAYTKNFTSKDATKQQ 1159
W DPI +EFKYVFLA SS+LKGQSDKEKYEKAR L I IR AYTK+F SKD TK+Q
Sbjct: 548 WNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAYTKDFASKDITKRQ 607
Query: 1158 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNTLEFDFLGKDSIRYHNV 979
IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP PP+ L+FDFLGKDSIRY N
Sbjct: 608 IAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSILKFDFLGKDSIRYQNE 667
Query: 978 VEVELPVFEAIQKFRKGKKGGDNLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASKTLDD 799
VEVELPV++AIQ+FR GK+GGD+LFD LDTSKLNAHLK L+PGLTAKVFRTYNAS TLD+
Sbjct: 668 VEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGLTAKVFRTYNASITLDE 727
Query: 798 LLSAETNVGDVAENIVVYQHANKEVAIICNHQRTVSKSHDQQMERLDEKIKXXXXXXXXX 619
+LS ET G+VAE IVVYQHANKEVAIICNHQRTVSKSH QM RL+ KI
Sbjct: 728 MLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPAQMTRLNGKIDELKGILDGL 787
Query: 618 XXXXDRAKKGKPPLKGTDGKTKRNLAPEALEKKIAQTHLRIEKMERDKSTKEDLKTVALG 439
RAKKGKPPL+ DGK KRNL PEALE+KI QT+ +IEKMERDK TKE LKT+ALG
Sbjct: 788 QTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKIEKMERDKETKEGLKTIALG 847
Query: 438 TSKINYLDPRITVAWCKRHEVPMEKIFNKSLLAKFSWAMDVEPSFR 301
TSKI+YLDPRITVAWCKRHEVP+EK+FNKSLLAKF+W+MDV+PSFR
Sbjct: 848 TSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVDPSFR 893
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 993 bits (2567), Expect = 0.0
Identities = 548/929 (58%), Positives = 639/929 (68%), Gaps = 63/929 (6%)
Frame = -3
Query: 2898 NLMEDYEHHQ-PVVFKXXXXXXXXXXSNTESYKSSSQKPDGQPGRQASDVCXXXXXXXXX 2722
NLMED E + PV+FK +N+E K S QK GQ SDV
Sbjct: 9 NLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVRPANGESSSA 68
Query: 2721 XXGTTIXXXXXXXXXSPLPGMRTXXXXXXXXXXXXXXPTVTSPMSDHGNRMSPGLAGTIV 2542
G SPL + SP++ G P + T
Sbjct: 69 QKGRIQPSAKTPPVKSPLSSPKASNSSAK-----------ASPITSPGANSKPSASATST 117
Query: 2541 KEE----KSSAE--------PSKTANGDSDS-EDEVPLSMRT-----KSRSVNSSKTPQG 2416
++ KSSA P+ AN +S+S +DE PLS RT K +S +++K
Sbjct: 118 AKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGD 177
Query: 2415 SNSTSRLSAPKQEESDDDKPLSN--FKRATNGASSSNYSDSEDEKPLAKRRQQNGLA--- 2251
S S R + E+S+D+KPLS +++ G S+S DS+++KPLA + QQNG
Sbjct: 178 SCSIRRRVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRD 237
Query: 2250 -PTKKSSVGSDKRPSTDSKSSVQSLIKRPKLSNASTSRNLKPASVKAEPKVV-------- 2098
P KS+ S+KRP + KS QS +K+PKLS+ TS + K A+VK EP+
Sbjct: 238 GPMNKSASLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNI 297
Query: 2097 ------------------EDNDHIPVSQRIK-----LSGSSTSVGKKYXXXXXXXXXXXX 1987
ED+D++P++QRIK +S SS V K
Sbjct: 298 PLSQRGKKSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNK 357
Query: 1986 XXXXXXXXXKYE------PSSSGGQKWTTLVHNGVIFPPPYQPHGVKMLYKGKPVDLTPG 1825
Y P S GQKWTTLVHNGVIFPPPY PHGVKMLYK +P+ LTP
Sbjct: 358 NSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPE 417
Query: 1824 QEEVATMYAVMLDTDYISKPQFRENFFNDWKKILGKNHVIQNLEDCDFTPMYEWHQAEKE 1645
QEEVATM+AVMLDTDY++KP+F+ENFF+DWKK+LGKNH IQNLEDCDF P+YEWHQ EKE
Sbjct: 418 QEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKE 477
Query: 1644 KKKQRSSDEKKAINEEKMKLEEKYKWAIVDGVKEKVGSFRVEPPGLFRGRGEHPKVGKLK 1465
KKKQ +++EKKA+ E+K++ EEKY WAIVDGVKEKVG+FRVEPPGLFRGRGEHPK+GKLK
Sbjct: 478 KKKQMTTEEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK 537
Query: 1464 KRIRPSDITINIGKGAPIPECPVPGERWKEVRNDNTVTWLAYWMDPINSKEFKYVFLAPS 1285
KRIRP DITINIGK APIPECP+PGERWKEVRNDNTVTWLA+W+DPIN KEFKYVFLA S
Sbjct: 538 KRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAAS 597
Query: 1284 SALKGQSDKEKYEKARKLTVHIDKIREAYTKNFTS-KDATKQQIAVATYLIDKLALRAGN 1108
S LKGQSDKEKYEKAR L +I IR AYTK+FT+ KD K+QIAVATYLIDKLALRAGN
Sbjct: 598 STLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGN 657
Query: 1107 EKDDDEADTVGCCTLKVENVEPVPPNTLEFDFLGKDSIRYHNVVEVELPVFEAIQKFRKG 928
EKDDDEADTVGCCTLKVENVEPVPPN L+FDFLGKDSIRY N V+VE VF+AIQ+FR G
Sbjct: 658 EKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSG 717
Query: 927 KKGGDNLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASKTLDDLLSAETNVGDVAENIVV 748
K+G ++LFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+LS ET G+VAE +VV
Sbjct: 718 KEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVV 777
Query: 747 YQHANKEVAIICNHQRTVSKSHDQQMERLDEKIKXXXXXXXXXXXXXDRAKKGKPPLKGT 568
YQHANKEVAIICNHQRTVSKSH QM RL+EKI R KKGKPP KG
Sbjct: 778 YQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGA 837
Query: 567 DGKTKRNLAPEALEKKIAQTHLRIEKMERDKSTKEDLKTVALGTSKINYLDPRITVAWCK 388
DGK KRNL PEALE+K+AQ + +IEKMERDK TKEDLKTVALGTSKINYLDPRITVAWCK
Sbjct: 838 DGKPKRNLNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCK 897
Query: 387 RHEVPMEKIFNKSLLAKFSWAMDVEPSFR 301
RHEVP+EKIFNKSLLAKF+W+MDV+PSFR
Sbjct: 898 RHEVPIEKIFNKSLLAKFAWSMDVDPSFR 926
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 987 bits (2551), Expect = 0.0
Identities = 548/921 (59%), Positives = 635/921 (68%), Gaps = 61/921 (6%)
Frame = -3
Query: 2898 NLMEDYEHHQ-PVVFKXXXXXXXXXXSNTESYKSSSQKPDGQPGRQASDVCXXXXXXXXX 2722
NLMED E + PV+FK +N+E K S Q+ GQ SDV
Sbjct: 10 NLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVRPANGENSSA 69
Query: 2721 XXGTTIXXXXXXXXXSPLPGMRTXXXXXXXXXXXXXXPTVTSPMSDHGNRMSPGLAGTIV 2542
G SPL + SP++ G P + T
Sbjct: 70 QKGRIQPSAKTPPVKSPLSSPKASNSSAK-----------ASPITSAGANSKPSASATST 118
Query: 2541 KEE----KSSAE--------PSKTANGDSDS-EDEVPLSMRT-----KSRSVNSSKTPQG 2416
++ KSSA P+ AN +S+S +DE PLS RT K +S +++K
Sbjct: 119 AKQQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGD 178
Query: 2415 SNSTSRLSAPKQEESDDDKPLSN--FKRATNGASSSNYSDSEDEKPLAKRRQQNGLA--- 2251
S S R + E+S+D+KPLS +++ G S+S DS+++KPLA + Q NG A
Sbjct: 179 SCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRD 238
Query: 2250 -PTKKSSVGSDKRPSTDSKSSVQSLIKRPKLSNASTSRNLKPASVKAEPKVV-------- 2098
P KS+ S+KRP + KS QS +K+PKLS+ TS + K A+VK EPK
Sbjct: 239 SPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPL 298
Query: 2097 ----------------EDNDHIPVSQRIK-----LSGSSTSVGKKYXXXXXXXXXXXXXX 1981
ED+D++P+SQRIK +S SS V K
Sbjct: 299 SQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKS 358
Query: 1980 XXXXXXXKYE------PSSSGGQKWTTLVHNGVIFPPPYQPHGVKMLYKGKPVDLTPGQE 1819
Y P S GQKWTTLVHNGVIFPPPY+PHGVKMLYK +P+ LTP QE
Sbjct: 359 KKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQE 418
Query: 1818 EVATMYAVMLDTDYISKPQFRENFFNDWKKILGKNHVIQNLEDCDFTPMYEWHQAEKEKK 1639
EVATM+AVMLDTDY++KP+F+ENFF+DWKK+LGKNH IQNLEDCDF P+YEWHQ EKEKK
Sbjct: 419 EVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKK 478
Query: 1638 KQRSSDEKKAINEEKMKLEEKYKWAIVDGVKEKVGSFRVEPPGLFRGRGEHPKVGKLKKR 1459
KQ +++EKKA+ EEK++ EEKY WAIVDGVKEKVG+FRVEPPGLFRGRGEHPK+GKLKKR
Sbjct: 479 KQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 538
Query: 1458 IRPSDITINIGKGAPIPECPVPGERWKEVRNDNTVTWLAYWMDPINSKEFKYVFLAPSSA 1279
IRP DITINIGK APIPECP+PGERWKEVRNDNTVTWLAYW DPIN KEFKYVFLA SS
Sbjct: 539 IRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASST 598
Query: 1278 LKGQSDKEKYEKARKLTVHIDKIREAYTKNFTS-KDATKQQIAVATYLIDKLALRAGNEK 1102
LKGQSDKEKYEKAR L +I IR AYTK+FT+ KD K+QIAVATYLIDKLALRAGNEK
Sbjct: 599 LKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 658
Query: 1101 DDDEADTVGCCTLKVENVEPVPPNTLEFDFLGKDSIRYHNVVEVELPVFEAIQKFRKGKK 922
DDDEADTVGCCTLKVENVEPVPPN L+FDFLGKDSIRY N V+VE VF+AIQ+FR GK+
Sbjct: 659 DDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKE 718
Query: 921 GGDNLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASKTLDDLLSAETNVGDVAENIVVYQ 742
G ++LFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+LS +TN G+VAE +VVYQ
Sbjct: 719 GSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQ 778
Query: 741 HANKEVAIICNHQRTVSKSHDQQMERLDEKIKXXXXXXXXXXXXXDRAKKGKPPLKGTDG 562
HANKEVAIICNHQRTVSKSH QM RL+EKI RAKKGKP KG DG
Sbjct: 779 HANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADG 838
Query: 561 KTKRNLAPEALEKKIAQTHLRIEKMERDKSTKEDLKTVALGTSKINYLDPRITVAWCKRH 382
K KRNL PEALE+KIAQT+ +IEKMERDK TKEDLKTVALGTSKINYLDPRITVAWCKRH
Sbjct: 839 KPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRH 898
Query: 381 EVPMEKIFNKSLLAKFSWAMD 319
EVP+EKIFNKSLLAKF+WAM+
Sbjct: 899 EVPIEKIFNKSLLAKFAWAMN 919