BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007965
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   371   e-100
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   362   1e-97
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   360   7e-97

>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  372 bits (955), Expect = e-100
 Identities = 207/354 (58%), Positives = 256/354 (72%), Gaps = 2/354 (0%)
 Frame = -3

Query: 1058 LLTNDEAFIAATAAKVVSLAQTALEVAKDAALMXXXXXXXXXXXNP--AAKSYSKNSISE 885
            L+ NDEA IAA AA+ V+LA+ A++VAKDAA M               A+ + S +S+  
Sbjct: 93   LIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSSMKKETKIPIASTTDSFSSMWS 152

Query: 884  NIGLGQCVEVGRLRESADFSLGEIDALLRPHSEYDDTEATPEELKLLDAELERSILVRSR 705
             +   +  ++     SA+  L E  ++  P  EYD  E T EEL LL  +L   I VRS+
Sbjct: 153  LLTEKERADIIGDSVSAETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSK 212

Query: 704  RQTEQRSKRTRAAEKAAADIMLVXXXXXXXXXXXXXXQDVVHPDRLRYFRGRSSNSRLLS 525
            RQTE++++R RAAEKAAA+++ V               +V   D LR+FRG SS+SRLLS
Sbjct: 213  RQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQ-EVDQSDPLRFFRGASSSSRLLS 271

Query: 524  ATEEKQLSEGIQGLLKLERLQEELTLRCGAQPTFPQWAMAAGIDQKTLRQRLNYGILCKD 345
            ATEE +LSEGIQ LLKLER++EEL  R G +P+F QWA AAG+DQ TLR+RLNYGILCKD
Sbjct: 272  ATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKD 331

Query: 344  KMVKSNIRLVISIAKHFQGSGMSLQDLVQEGCRGLIIGAEKFDASKGFKFSTYAHWWIKQ 165
            KM+KSN+RLVISIAK++QG+GM+LQDLVQEGCRGL+ GAEKFDASKGFKFSTYAHWWIKQ
Sbjct: 332  KMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ 391

Query: 164  SVHKFLSDHSRTIRLPLHTVEATCRVKEARKQLFNKNGRLPDDKELAEATGFSM 3
            +V K LSD SRTIRLP H V+AT RVKEARKQL+++NGR PDDKE+AEA G SM
Sbjct: 392  AVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEAAGLSM 445


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  371 bits (953), Expect = e-100
 Identities = 205/355 (57%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
 Frame = -3

Query: 1058 LLTNDEAFIAATAAKVVSLAQTALEVAKDAALMXXXXXXXXXXXNPAA-KSYSKNSISEN 882
            LLT++EA IAA AA+ V+LA+ A++VAKDAA +            PA+  S    S    
Sbjct: 100  LLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRR 159

Query: 881  IGLGQCVEVGRLRESADFSLGEID--ALLRPHSEYDDTEATPEELKLLDAELERSILVRS 708
            I   +   +G L +S     G +D  +L     + DD E T EEL+LL+AE  +SI+VRS
Sbjct: 160  IQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRS 219

Query: 707  RRQTEQRSKRTRAAEKAAADIMLVXXXXXXXXXXXXXXQDVVHPDRLRYFRGRSSNSRLL 528
             RQ E++++R RAAEKA+A ++ V               +V + D LRY RG +S SRLL
Sbjct: 220  NRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQ-EVDYSDPLRYLRGTTSTSRLL 278

Query: 527  SATEEKQLSEGIQGLLKLERLQEELTLRCGAQPTFPQWAMAAGIDQKTLRQRLNYGILCK 348
            +ATEE +LSEGIQ LLKLE+LQE+L  R G +PTF QWA AAG+DQKTLR+R NYGI CK
Sbjct: 279  TATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCK 338

Query: 347  DKMVKSNIRLVISIAKHFQGSGMSLQDLVQEGCRGLIIGAEKFDASKGFKFSTYAHWWIK 168
            DKM+KSNIRLVISIAK++QG+GM++QDLVQEGCRGL+ GAEKFDASKGFKFSTYAHWWIK
Sbjct: 339  DKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 398

Query: 167  QSVHKFLSDHSRTIRLPLHTVEATCRVKEARKQLFNKNGRLPDDKELAEATGFSM 3
            Q+V K LSD SRTIRLP H VEAT RVKEARKQL+++NGR P+++E+AEATG SM
Sbjct: 399  QAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSM 453



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 54/144 (37%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
 Frame = -3

Query: 1676 MSCLLSQFKCLPHTFSANLNSPQPQH--SKCKETIKMRTQCVLXXXXXXXXXXXTVIDVD 1503
            MSCLL QFKC P TFS +       H  SK +E I  R QC L                 
Sbjct: 1    MSCLLPQFKCPPDTFSTH----PKLHILSKNREAIYFRVQCALS---------------- 40

Query: 1502 KLQHQSLEANPDPLPGQRTWRLPVST-TTAALNLEQLRILSLETHPSSESVNRRWIYTGT 1326
                              T   P+ST TTA L++E+LR+ SLE+H +S + +R W Y G 
Sbjct: 41   ------------------TTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGV 82

Query: 1325 AVPPIEARHVAPLTKETFRTSDEA 1254
              PP EA   A L +ET  TS+EA
Sbjct: 83   VGPPTEANFEATLARETLLTSEEA 106


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  371 bits (953), Expect = e-100
 Identities = 205/355 (57%), Positives = 256/355 (72%), Gaps = 3/355 (0%)
 Frame = -3

Query: 1058 LLTNDEAFIAATAAKVVSLAQTALEVAKDAALMXXXXXXXXXXXNPAA-KSYSKNSISEN 882
            LLT++EA IAA AA+ V+LA+ A++VAKDAA +            PA+  S    S    
Sbjct: 103  LLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRR 162

Query: 881  IGLGQCVEVGRLRESADFSLGEID--ALLRPHSEYDDTEATPEELKLLDAELERSILVRS 708
            I   +   +G L +S     G +D  +L     + DD E T EEL+LL+AE  +SI+VRS
Sbjct: 163  IQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRS 222

Query: 707  RRQTEQRSKRTRAAEKAAADIMLVXXXXXXXXXXXXXXQDVVHPDRLRYFRGRSSNSRLL 528
             RQ E++++R RAAEKA+A ++ V               +V + D LRY RG +S SRLL
Sbjct: 223  NRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQ-EVDYSDPLRYLRGTTSTSRLL 281

Query: 527  SATEEKQLSEGIQGLLKLERLQEELTLRCGAQPTFPQWAMAAGIDQKTLRQRLNYGILCK 348
            +ATEE +LSEGIQ LLKLE+LQE+L  R G +PTF QWA AAG+DQKTLR+R NYGI CK
Sbjct: 282  TATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCK 341

Query: 347  DKMVKSNIRLVISIAKHFQGSGMSLQDLVQEGCRGLIIGAEKFDASKGFKFSTYAHWWIK 168
            DKM+KSNIRLVISIAK++QG+GM++QDLVQEGCRGL+ GAEKFDASKGFKFSTYAHWWIK
Sbjct: 342  DKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIK 401

Query: 167  QSVHKFLSDHSRTIRLPLHTVEATCRVKEARKQLFNKNGRLPDDKELAEATGFSM 3
            Q+V K LSD SRTIRLP H VEAT RVKEARKQL+++NGR P+++E+AEATG SM
Sbjct: 402  QAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSM 456



 Score = 73.6 bits (179), Expect = 2e-10
 Identities = 54/147 (36%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
 Frame = -3

Query: 1676 MSCLLSQFKCLPHTFSANLNSPQPQHSKCK-----ETIKMRTQCVLXXXXXXXXXXXTVI 1512
            MSCLL QFKC P TFS +       H  CK     E I  R QC L              
Sbjct: 1    MSCLLPQFKCPPDTFSTH----PKLHILCKSPKNREAIYFRVQCALS------------- 43

Query: 1511 DVDKLQHQSLEANPDPLPGQRTWRLPVST-TTAALNLEQLRILSLETHPSSESVNRRWIY 1335
                                 T   P+ST TTA L++E+LR+ SLE+H +S + +R W Y
Sbjct: 44   ---------------------TTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTY 82

Query: 1334 TGTAVPPIEARHVAPLTKETFRTSDEA 1254
             G   PP EA   A L +ET  TS+EA
Sbjct: 83   IGVVGPPTEANFEATLARETLLTSEEA 109


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  362 bits (930), Expect = 1e-97
 Identities = 208/361 (57%), Positives = 252/361 (69%), Gaps = 9/361 (2%)
 Frame = -3

Query: 1058 LLTNDEAFIAATAAKVVSLAQTALEVAKDAALMXXXXXXXXXXXN------PAAKSYSKN 897
            LLT++EA IAA AA+ V+LA+ A++VA+DAAL+                  P A  +   
Sbjct: 106  LLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWA 165

Query: 896  SISENIG---LGQCVEVGRLRESADFSLGEIDALLRPHSEYDDTEATPEELKLLDAELER 726
               E+     +G+ V V +          E DAL    +E DD E T EEL+LL  EL  
Sbjct: 166  QFMESERADIIGEPVGVNKRPM-------EGDALEPSTTESDDMEPTSEELELLQDELSE 218

Query: 725  SILVRSRRQTEQRSKRTRAAEKAAADIMLVXXXXXXXXXXXXXXQDVVHPDRLRYFRGRS 546
            SI V+S+RQTE++++RTRAAEK    + L               Q+V + D LRY R  +
Sbjct: 219  SITVKSKRQTERKARRTRAAEKTVTSV-LSFKSGSSSRKKRNSVQEVDYSDPLRYLRATT 277

Query: 545  SNSRLLSATEEKQLSEGIQGLLKLERLQEELTLRCGAQPTFPQWAMAAGIDQKTLRQRLN 366
            + SRLL+ATEE +LSEGIQ LLKLERLQEEL  R G +PTF QWA AAG++Q+TLR+RLN
Sbjct: 278  NTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLN 337

Query: 365  YGILCKDKMVKSNIRLVISIAKHFQGSGMSLQDLVQEGCRGLIIGAEKFDASKGFKFSTY 186
            YG LCKDKM+KSNIRLVISIAK++QG+GM+LQDLVQEGCRGL+ GAEKFDASKGFKFSTY
Sbjct: 338  YGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTY 397

Query: 185  AHWWIKQSVHKFLSDHSRTIRLPLHTVEATCRVKEARKQLFNKNGRLPDDKELAEATGFS 6
            AHWWIKQ+V KFLSD SRTIRLP H VEAT RVKEARKQL ++NGR PDDKE+AEA G S
Sbjct: 398  AHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLS 457

Query: 5    M 3
            M
Sbjct: 458  M 458


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  360 bits (924), Expect = 7e-97
 Identities = 203/360 (56%), Positives = 251/360 (69%), Gaps = 8/360 (2%)
 Frame = -3

Query: 1058 LLTNDEAFIAATAAKVVSLAQTALEVAKDAALMXXXXXXXXXXXNPAAKSYSKNSISENI 879
            L+T+DEA IAA AA+ V+LA+ A++VAKDAAL+            P+A++ SK +    I
Sbjct: 97   LITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNF--------PSAETESKLTSPSTI 148

Query: 878  GLG---QCVEVGRLRESADFSLGEI-----DALLRPHSEYDDTEATPEELKLLDAELERS 723
                  Q  E  R R   D    E       ++     E D  E T +EL+LL  +L   
Sbjct: 149  DASRWPQFTETERARIIGDSVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEG 208

Query: 722  ILVRSRRQTEQRSKRTRAAEKAAADIMLVXXXXXXXXXXXXXXQDVVHPDRLRYFRGRSS 543
            I VRSRRQTE++++R RA EKAA+ ++ V               +V + D LRY RG +S
Sbjct: 209  IAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQ-EVDYSDPLRYLRGTTS 267

Query: 542  NSRLLSATEEKQLSEGIQGLLKLERLQEELTLRCGAQPTFPQWAMAAGIDQKTLRQRLNY 363
             SRLL+A+EE +LS  IQ LLKLERLQEEL  R G QPTF QWA AAG+DQ+TLR+R+N+
Sbjct: 268  TSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINH 327

Query: 362  GILCKDKMVKSNIRLVISIAKHFQGSGMSLQDLVQEGCRGLIIGAEKFDASKGFKFSTYA 183
            G +CKDKM+KSNIRLVISIAK++QG+GM+LQDLVQEGCRGL+ GAEKFDASKGFKFSTYA
Sbjct: 328  GTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYA 387

Query: 182  HWWIKQSVHKFLSDHSRTIRLPLHTVEATCRVKEARKQLFNKNGRLPDDKELAEATGFSM 3
            HWWIKQ+V K LSD SRTIRLP H VEAT RVKEARKQL+++NGR PDD+E+AEA G SM
Sbjct: 388  HWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEAAGLSM 447