BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007923
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   311   8e-83
ref|XP_002514718.1| pentatricopeptide repeat-containing protein,...   311   8e-83
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   311   1e-82
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   309   4e-82
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...   309   4e-82

>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  311 bits (798), Expect = 8e-83
 Identities = 157/256 (61%), Positives = 192/256 (75%)
 Frame = +3

Query: 3   PYSTRIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSC 182
           PY   +F QV+YPNPF++TALIRGY  +    + V +Y  MR   + PVSFT T LLK+C
Sbjct: 90  PYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKAC 149

Query: 183 SDEENLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVISW 362
           S   ++ LGRQ+H + + IGGF  D++V NTLIDMYVKCG LG   +VFDEM  RDVISW
Sbjct: 150 SAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209

Query: 363 TTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGVE 542
           T+LIVAY K G+   A  LF GL  KDMVAWTAMVTG+ QN RPREAL  FE M  +GV+
Sbjct: 210 TSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVK 269

Query: 543 ADELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEAY 722
            DE+TLVGVISACAQLGA KYA WVR++AE+ GFGP  +V +GS+LIDMY+KCGSV +AY
Sbjct: 270 TDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAY 329

Query: 723 EVFKGMRVKNVFSYSS 770
           +VF+ M  +NV+SYSS
Sbjct: 330 KVFERMEERNVYSYSS 345



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 56/252 (22%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
 Frame = +3

Query: 15  RIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCSDEE 194
           R+F ++   +   +T+LI  Y    N E   E++  + +  +   +  +T   ++    E
Sbjct: 196 RVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPRE 255

Query: 195 NLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDA------RKVFDEM---PKR 347
            L +      ER+   G   D     TL+ +   C +LG A      R V ++    P  
Sbjct: 256 ALEVF-----ERMQAAGVKTDEV---TLVGVISACAQLGAAKYANWVRDVAEQSGFGPTS 307

Query: 348 DVISWTTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMM 527
           +V+  + LI  Y K G    A  +F  ++++++ ++++M+ GF  +G    A+  F+ M+
Sbjct: 308 NVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEML 367

Query: 528 NSGVEADELTLVGVISACAQLGAIKYAGWVRNMAERL-GFGPEDSVFMGSSLIDMYSKCG 704
            + ++ + +T +GV++AC+  G ++    +  M E   G  P +  +  + ++D+  + G
Sbjct: 368 KTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHY--ACMVDLLGRAG 425

Query: 705 SVMEAYEVFKGM 740
            + EA  + K M
Sbjct: 426 RLEEALNLVKMM 437


>ref|XP_002514718.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546322|gb|EEF47824.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 399

 Score =  311 bits (798), Expect = 8e-83
 Identities = 153/257 (59%), Positives = 196/257 (76%), Gaps = 1/257 (0%)
 Frame = +3

Query: 3   PYSTRIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSC 182
           PY   IF+QV +PNPF+Y+A+IRGY  E    + V++Y  MR+ +V PVSFT + + K+C
Sbjct: 91  PYPRSIFNQVKFPNPFLYSAVIRGYSIEGILSESVKVYSFMRMEHVGPVSFTFSAIFKAC 150

Query: 183 SDEENLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVISW 362
               +L LGRQMH + + IGGFC D+FV NTLIDMY+KCG L   RKVF+ MP++DVISW
Sbjct: 151 GAVGDLHLGRQMHAQSILIGGFCSDLFVSNTLIDMYIKCGVLECGRKVFNAMPEKDVISW 210

Query: 363 TTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGVE 542
           T +IVAY K GD   A VLF GL  KDMVAWTAMVTGF QN +PREA+++FE M ++G+ 
Sbjct: 211 TEMIVAYAKSGDMDSAHVLFDGLPVKDMVAWTAMVTGFSQNAKPREAIQFFERMQDAGIG 270

Query: 543 ADELTLVGVISACAQLGAIKYAGWVRNMAER-LGFGPEDSVFMGSSLIDMYSKCGSVMEA 719
            DE+TLVGVISAC+QLGA +YA W+R++AE+  G+    SV +GS+LIDMYSKCGSV  A
Sbjct: 271 TDEVTLVGVISACSQLGAAEYADWIRDIAEKQYGYDWGYSVVLGSALIDMYSKCGSVDCA 330

Query: 720 YEVFKGMRVKNVFSYSS 770
           Y+VFKG++ +NVFSYSS
Sbjct: 331 YKVFKGLKDRNVFSYSS 347


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  311 bits (796), Expect = 1e-82
 Identities = 151/255 (59%), Positives = 191/255 (74%)
 Frame = +3

Query: 6   YSTRIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCS 185
           Y   +F QV+YPNPF++TA+IRGY  +    +    Y  MR + V PVSFT + L K+C 
Sbjct: 94  YPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG 153

Query: 186 DEENLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVISWT 365
              N+ LG+Q+H + + IGGF  D++V N++ID+YVKCG LG ARKVFDEM +RDV+SWT
Sbjct: 154 AALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWT 213

Query: 366 TLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGVEA 545
            LIVAY K GD   A  LF  L  KDMVAWTAMVTG+ QNGRP+EAL YF+ M + G+E 
Sbjct: 214 ELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMET 273

Query: 546 DELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEAYE 725
           DE+TL GVISACAQLGA+K+A W+R++AER GFGP  +V +GS+LIDMYSKCGS  EAY+
Sbjct: 274 DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333

Query: 726 VFKGMRVKNVFSYSS 770
           VF+ M+ +NVFSYSS
Sbjct: 334 VFEVMKERNVFSYSS 348



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
 Frame = +3

Query: 18  IFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCSDEEN 197
           +F  +   +   +TA++ GY      ++ +E ++ M+   ++    TL  ++ +C+    
Sbjct: 231 LFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ--- 287

Query: 198 LILGRQMH----KERVTIGGF--CRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVIS 359
             LG   H    ++     GF    +V V + LIDMY KCG   +A K            
Sbjct: 288 --LGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK------------ 333

Query: 360 WTTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGV 539
                              +F  + ++++ ++++M+ G+  +GR   AL+ F  M+ + +
Sbjct: 334 -------------------VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEI 374

Query: 540 EADELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEA 719
             +++T +G++SAC+  G ++    +    E+  FG   S    + ++D+  + G + EA
Sbjct: 375 RPNKVTFIGILSACSHAGLVEQGRQLFAKMEKF-FGVAPSPDHYACMVDLLGRAGCLEEA 433

Query: 720 YEVFKGM 740
            ++ K M
Sbjct: 434 LDLVKTM 440


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  309 bits (792), Expect = 4e-82
 Identities = 151/255 (59%), Positives = 191/255 (74%)
 Frame = +3

Query: 6   YSTRIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCS 185
           Y   +F QV+YPNPF++TA+IRGY  +    +    Y  MR + V PVSFT + L K+C 
Sbjct: 94  YPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACG 153

Query: 186 DEENLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVISWT 365
              N+ LG+Q+H + + IGGF  D++V N++ID+YVKCG LG ARKVFDEM +RDV+SWT
Sbjct: 154 AALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWT 213

Query: 366 TLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGVEA 545
            LIVAY K GD   A  LF  L  KDMVAWTAMVTG+ QNGRP+EAL YF+ M + G+E 
Sbjct: 214 ELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMET 273

Query: 546 DELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEAYE 725
           DE+TL GVISACAQLGA+K+A W+R++AER GFGP  +V +GS+LIDMYSKCGS  EAY+
Sbjct: 274 DEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333

Query: 726 VFKGMRVKNVFSYSS 770
           VF+ M+ +NVFSYSS
Sbjct: 334 VFEVMKERNVFSYSS 348



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 52/247 (21%), Positives = 111/247 (44%), Gaps = 6/247 (2%)
 Frame = +3

Query: 18  IFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCSDEEN 197
           +F  +   +   +TA++ GY      ++ +E ++ M+   ++    TL  ++ +C+    
Sbjct: 231 LFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ--- 287

Query: 198 LILGRQMH----KERVTIGGF--CRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVIS 359
             LG   H    ++     GF    +V V + LIDMY KCG   +A K            
Sbjct: 288 --LGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK------------ 333

Query: 360 WTTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGV 539
                              +F  + ++++ ++++M+ G+  +GR   AL+ F  M+ + +
Sbjct: 334 -------------------VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEI 374

Query: 540 EADELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEA 719
             +++T +G++SAC+  G ++    +    E+  FG   S    + ++D+  + G + EA
Sbjct: 375 RPNKVTFIGILSACSHAGLVEQGRQLFAKMEKF-FGVAPSPDHYACMVDLLGRAGCLEEA 433

Query: 720 YEVFKGM 740
            ++ K M
Sbjct: 434 LDLVKTM 440


>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  309 bits (792), Expect = 4e-82
 Identities = 152/256 (59%), Positives = 190/256 (74%)
 Frame = +3

Query: 3   PYSTRIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSC 182
           PY   IF+QV+YPNPF+Y ALIRGY  E+  ++  E Y  MR   V PVSFT T L K+C
Sbjct: 97  PYPLSIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKAC 156

Query: 183 SDEENLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDARKVFDEMPKRDVISW 362
             + ++ LGRQ+H + + +GGF  D+ V N++IDMY+KCG L   RKVFDEMP RDVISW
Sbjct: 157 GAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISW 216

Query: 363 TTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMMNSGVE 542
           T LI AY+K G+   A  LF GL  KDMVAWT MV+GF QN +PREA+ +FE M   GVE
Sbjct: 217 TELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVE 276

Query: 543 ADELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGSVMEAY 722
            DE+TL+GVISACAQLGA KYA W+R++AE+  FG + SV +GS+LIDMYSKCGSV +AY
Sbjct: 277 TDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAY 336

Query: 723 EVFKGMRVKNVFSYSS 770
            VF+GM+ +NV+SYSS
Sbjct: 337 RVFQGMKERNVYSYSS 352



 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 55/254 (21%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
 Frame = +3

Query: 15  RIFHQVDYPNPFVYTALIRGYCNEKNQEKGVEMYRHMRVNYVDPVSFTLTCLLKSCSDEE 194
           ++F ++   +   +T LI  Y    N E   E++  + V  +   +  ++   ++    E
Sbjct: 203 KVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPRE 262

Query: 195 NLILGRQMHKERVTIGGFCRDVFVCNTLIDMYVKCGELGDA------RKVFDEMP---KR 347
            ++   +M +  V             TLI +   C +LG A      R V ++     K 
Sbjct: 263 AIMFFEKMQEFGVETDEI--------TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKH 314

Query: 348 DVISWTTLIVAYMKKGDTVGARVLFRGLDDKDMVAWTAMVTGFEQNGRPREALRYFEMMM 527
            V+  + LI  Y K G    A  +F+G+ ++++ ++++M+ GF  +GR  +A++ F+ M+
Sbjct: 315 SVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMV 374

Query: 528 NSGVEADELTLVGVISACAQLGAIKYAGWVRNMAERLGFGPEDSVFMGSSLIDMYSKCGS 707
            + ++ + +T +GV++AC+  G ++    +  + E+  +G + S    + ++D+  + G 
Sbjct: 375 KTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKC-YGIKPSADHYTCMVDLLGRAGR 433

Query: 708 VMEAYEVFKGMRVK 749
           + EA+E+ K M ++
Sbjct: 434 LQEAHELVKTMPIE 447