BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007795
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                 82   3e-18
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...    82   1e-17
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...    82   1e-17
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...    82   1e-17
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...    77   2e-17

>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score = 81.6 bits (200), Expect(2) = 3e-18
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
 Frame = -2

Query: 373  MLVYVDHILVSGNHSSSVADFIAALSSKFVTRDLGTLSFFLGIEALKQADGSLLLSQRQY 194
            +L+YVD I+V+ +   +    +  L+  F  +DLG L +FLGIEA K  DG +LLSQ +Y
Sbjct: 1014 VLIYVDDIIVASSMPDATTALLQDLNKSFALKDLGELHYFLGIEATKVCDG-ILLSQEKY 1072

Query: 193  MLDLL---NMLNCKPVSTPMSTTSAPPITE----APPDPTLYRQLVVSLQ 65
            + DLL   NM  CKPVSTP+S T    I +     P D T YR +V +LQ
Sbjct: 1073 VKDLLKRINMDKCKPVSTPLSPTEKLSIHQGDVLGPNDATNYRSIVGALQ 1122



 Score = 34.7 bits (78), Expect(2) = 3e-18
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = -3

Query: 57   LTRPDLSFVVNQVCQHMH 4
            LTRPD+SF VN+VCQ++H
Sbjct: 1126 LTRPDISFSVNKVCQYLH 1143


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score = 81.6 bits (200), Expect(2) = 1e-17
 Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
 Frame = -2

Query: 373  MLVYVDHILVSGNHSSSVADFIAALSSKFVTRDLGTLSFFLGIEALKQADGSLLLSQRQY 194
            +L+YVD I+V+ +   + +  +  LS  F  +DLG L +FLGIE  K  DG L+LSQ +Y
Sbjct: 1075 LLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDG-LMLSQEKY 1133

Query: 193  MLDLL---NMLNCKPVSTPMSTTSAPPITE----APPDPTLYRQLVVSLQ 65
              DLL    M  CKPVSTP+ST+    + E     P D T YR +V +LQ
Sbjct: 1134 ASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQ 1183



 Score = 33.1 bits (74), Expect(2) = 1e-17
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 57   LTRPDLSFVVNQVCQHMH 4
            LTRPD+SF +N+VCQ +H
Sbjct: 1187 LTRPDISFSINKVCQFLH 1204


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score = 81.6 bits (200), Expect(2) = 1e-17
 Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
 Frame = -2

Query: 373 MLVYVDHILVSGNHSSSVADFIAALSSKFVTRDLGTLSFFLGIEALKQADGSLLLSQRQY 194
           +L+YVD I+V+ +   + +  +  LS  F  +DLG L +FLGIE  K  DG L+LSQ +Y
Sbjct: 67  LLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDG-LMLSQEKY 125

Query: 193 MLDLL---NMLNCKPVSTPMSTTSAPPITE----APPDPTLYRQLVVSLQ 65
             DLL    M  CKPVSTP+ST+    + E     P D T YR +V +LQ
Sbjct: 126 ASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQ 175



 Score = 33.1 bits (74), Expect(2) = 1e-17
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 57  LTRPDLSFVVNQVCQHMH 4
           LTRPD+SF +N+VCQ +H
Sbjct: 179 LTRPDISFSINKVCQFLH 196


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score = 82.0 bits (201), Expect(2) = 1e-17
 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
 Frame = -2

Query: 373  MLVYVDHILVSGNHSSSVADFIAALSSKFVTRDLGTLSFFLGIEALKQADGSLLLSQRQY 194
            +L+YVD I+V+ +   +V   +  L  +F  +DLG L +FLGIE  K   G ++L+Q +Y
Sbjct: 929  VLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTK-VSGGIVLTQDKY 987

Query: 193  MLDLL---NMLNCKPVSTPMSTTSAPPITEAPP----DPTLYRQLVVSLQ 65
            + DLL   NM +CKPVSTP+ST+    I E  P    D T YR +V +LQ
Sbjct: 988  VNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQ 1037



 Score = 32.3 bits (72), Expect(2) = 1e-17
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = -3

Query: 57   LTRPDLSFVVNQVCQHMH 4
            LTRPD++F VN+VCQ +H
Sbjct: 1041 LTRPDIAFPVNKVCQFLH 1058


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score = 77.0 bits (188), Expect(2) = 2e-17
 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
 Frame = -2

Query: 373  MLVYVDHILVSGNHSSSVADFIAALSSKFVTRDLGTLSFFLGIEALKQADGSLLLSQRQY 194
            +L+YVD I+++ + +  +   I AL ++F  +DLGTL  FLGI     + G LLLSQRQY
Sbjct: 785  LLLYVDDIVLTASSAGLLRWAIQALQAEFSMKDLGTLHHFLGITVTSDSSG-LLLSQRQY 843

Query: 193  MLDLL---NMLNCKPVSTPMSTTSAPPITEAPP--DPTLYRQLVVSLQ 65
             +++L    M +CKP STP+ T +    T+  P  DPT YR L  +LQ
Sbjct: 844  SIEILERAGMSDCKPCSTPVDTNAKLSSTDGSPVLDPTDYRSLASALQ 891



 Score = 36.6 bits (83), Expect(2) = 2e-17
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -3

Query: 54  TRPDLSFVVNQVCQHMHD 1
           TRPD+S+VV QVC HMHD
Sbjct: 896 TRPDISYVVQQVCLHMHD 913