BLASTX nr result
ID: Lithospermum22_contig00007792
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00007792
(695 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus ... 100 3e-19
ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|2... 92 1e-16
ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus ... 91 2e-16
ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|2... 91 3e-16
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g... 89 1e-15
>ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 416
Score = 100 bits (249), Expect = 3e-19
Identities = 62/145 (42%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Frame = +1
Query: 277 HGEAMKXXXXXXXXXXXXXKFLVDQTVLPIFEKNHNATIQPERGADSWADKTHSS----S 444
HGEA K KFLVD TV+PIFEK HNA I +R AD+ ADKT S +
Sbjct: 176 HGEASKVLKALEGVIGQLRKFLVDHTVVPIFEKTHNAIISQDRSADARADKTQPSIPSLT 235
Query: 445 LQXXXXXXXXXXXXXXXXXXKRDPYVLDPELQIDSKM--SYLSSYGANAVLGSLRTSVPG 618
KRDP + D E +D K+ S L +G ++ LG LR + G
Sbjct: 236 ALHSAPAPQVGIGSEYSLSLKRDPSIYDRESHLDQKIPQSGLLLFGQDSSLGGLRPTGLG 295
Query: 619 RTVTPVVTQMTKIMQIPLLYAEDII 693
R P+VTQMT+ MQ+PL YAEDII
Sbjct: 296 RAAAPIVTQMTQTMQVPLSYAEDII 320
Score = 63.2 bits (152), Expect = 5e-08
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +3
Query: 3 AGAAFCSMKLLVASSQAIHLIGRQGSTIKSIQESSGAAMRI 125
AGAAF S+KLLVASSQAI+LIG+QGSTIKSIQES+ A +R+
Sbjct: 116 AGAAFSSVKLLVASSQAINLIGKQGSTIKSIQESTAATVRV 156
>ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|222872620|gb|EEF09751.1|
predicted protein [Populus trichocarpa]
Length = 405
Score = 91.7 bits (226), Expect = 1e-16
Identities = 56/141 (39%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Frame = +1
Query: 277 HGEAMKXXXXXXXXXXXXXKFLVDQTVLPIFEKNHNATIQPERGADSWADKTHSSSLQXX 456
HGEAMK KFLVD +V+PIFEK +NATI E AD+ D S
Sbjct: 162 HGEAMKVFKALEAVIGQLRKFLVDHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAY 221
Query: 457 XXXXXXXXXXXXXXXXKRDPYVLDPELQIDSKMSY--LSSYGANAVLGSLRTSVPGRTVT 630
KRDP + + E Q + K+S LS YG + + R++ GR
Sbjct: 222 VPTIPSGIASDYSLSFKRDPSIYEHETQFEHKISQPGLSIYGQDPGIVGFRSTGLGRAAA 281
Query: 631 PVVTQMTKIMQIPLLYAEDII 693
P+VTQ+T+ MQ+PL YAEDII
Sbjct: 282 PIVTQVTQTMQVPLSYAEDII 302
Score = 63.2 bits (152), Expect = 5e-08
Identities = 30/41 (73%), Positives = 39/41 (95%)
Frame = +3
Query: 3 AGAAFCSMKLLVASSQAIHLIGRQGSTIKSIQESSGAAMRI 125
AG+AFCS++LLVASSQAI+LIG+QGS IKSIQE++GAA+ +
Sbjct: 102 AGSAFCSIRLLVASSQAINLIGKQGSIIKSIQENTGAAVHV 142
>ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 451
Score = 91.3 bits (225), Expect = 2e-16
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 280 GEAMKXXXXXXXXXXXXXKFLVDQTVLPIFEKNHNATIQPERGADSWADKT--HSSSLQX 453
GEAMK KFLVD +VLP+FEKN+NA I +R A++W+D++ H++S
Sbjct: 209 GEAMKVLEALEAIVGHLRKFLVDHSVLPLFEKNYNALISLDRQAETWSDRSSFHTTS--- 265
Query: 454 XXXXXXXXXXXXXXXXXKRDPYVLDPELQIDSK--MSYLSSYGANAVLGSLRTSVPGRTV 627
KRD +L+ E +S+ +S +S YG + + S+R+SV R+
Sbjct: 266 -----QGRIDIDYPLSGKRDALLLERETPFESQVPLSRISLYGQDPAISSVRSSVFNRSS 320
Query: 628 TPVVTQMTKIMQIPLLYAEDII 693
P+VTQ+T+ MQ+P+ YAE+II
Sbjct: 321 VPIVTQVTQTMQVPISYAEEII 342
Score = 59.3 bits (142), Expect = 7e-07
Identities = 29/41 (70%), Positives = 38/41 (92%)
Frame = +3
Query: 3 AGAAFCSMKLLVASSQAIHLIGRQGSTIKSIQESSGAAMRI 125
AG AF S++LLVAS+QAI+LIG+QGS IKSIQES+GA++R+
Sbjct: 148 AGIAFSSIRLLVASTQAINLIGKQGSIIKSIQESTGASVRV 188
>ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|222874914|gb|EEF12045.1|
predicted protein [Populus trichocarpa]
Length = 460
Score = 90.5 bits (223), Expect = 3e-16
Identities = 58/141 (41%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Frame = +1
Query: 277 HGEAMKXXXXXXXXXXXXXKFLVDQTVLPIFEKNHNATIQPERGADSWADKTHSSSLQXX 456
HGEAMK KFLVD +V+PIFEK +NATI ER AD+ AD S
Sbjct: 206 HGEAMKVFKALEAVIGHLRKFLVDHSVIPIFEKTYNATISLERPADACADNAQPS--LHS 263
Query: 457 XXXXXXXXXXXXXXXXKRDPYVLDPELQIDSKMSY--LSSYGANAVLGSLRTSVPGRTVT 630
KRDP + + E + K+S S YG ++G LR++ GR
Sbjct: 264 APAFSSGIISDYSLSLKRDPSIYEHETHFEHKISQPGFSLYGDPGLVG-LRSTGLGRATA 322
Query: 631 PVVTQMTKIMQIPLLYAEDII 693
P+VTQ+T+ MQ+PL YAEDII
Sbjct: 323 PIVTQVTQTMQVPLSYAEDII 343
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/41 (70%), Positives = 38/41 (92%)
Frame = +3
Query: 3 AGAAFCSMKLLVASSQAIHLIGRQGSTIKSIQESSGAAMRI 125
AG+AFCS++LLVASSQAI+LIG+QGS IKSIQE++G +R+
Sbjct: 146 AGSAFCSIRLLVASSQAINLIGKQGSIIKSIQENTGVVVRV 186
>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 88.6 bits (218), Expect = 1e-15
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 280 GEAMKXXXXXXXXXXXXXKFLVDQTVLPIFEKNHNATIQPERGADSWADKT--HSSSLQX 453
GEA+K KFLVD +VLP+FEK +NA+ +R A++W+DK+ H++S
Sbjct: 201 GEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNASTSQDRQAETWSDKSLLHTTS--- 257
Query: 454 XXXXXXXXXXXXXXXXXKRDPYVLDPELQIDSKM--SYLSSYGANAVLGSLRTSVPGRTV 627
KRD + D E Q+DS + S +S YG ++ L +R+S GR
Sbjct: 258 -----RTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMSLYGQDSSLSGVRSSALGRVG 312
Query: 628 TPVVTQMTKIMQIPLLYAEDII 693
P+VT + + MQIPL YAEDII
Sbjct: 313 APIVTTVIQTMQIPLSYAEDII 334
Score = 59.7 bits (143), Expect = 5e-07
Identities = 28/41 (68%), Positives = 38/41 (92%)
Frame = +3
Query: 3 AGAAFCSMKLLVASSQAIHLIGRQGSTIKSIQESSGAAMRI 125
AG AFCS++LLVAS+QAI+LIG+QGS IKSIQE++ A++R+
Sbjct: 140 AGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRV 180