BLASTX nr result
ID: Lithospermum22_contig00007788
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00007788
(1653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata su... 159 4e-65
ref|NP_172522.2| DNA polymerase lambda subunit [Arabidopsis thal... 161 7e-65
ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|2... 159 9e-64
gb|EEC80296.1| hypothetical protein OsI_22314 [Oryza sativa Indi... 153 3e-63
gb|EEE65406.1| hypothetical protein OsJ_20743 [Oryza sativa Japo... 153 3e-63
>ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata subsp. lyrata]
gi|297335656|gb|EFH66073.1| DNA polymerase lambda
[Arabidopsis lyrata subsp. lyrata]
Length = 529
Score = 159 bits (403), Expect(2) = 4e-65
Identities = 76/102 (74%), Positives = 92/102 (90%)
Frame = -1
Query: 786 IQ*IVRTGKLSKLEFLESNEKVRTITLFGEVWGIGPATALRLYEKGHRNLDELKNEDTLT 607
IQ IV TGKLSKLE E++EKVRTI+LFGEVWGIGPATAL+LY+KGHR L++LKNED+LT
Sbjct: 261 IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYDKGHRTLEDLKNEDSLT 320
Query: 606 QAQRIGLKFFDDIKTRIPHHEVREMEQLVQKVGEQVLPGVRL 481
AQR+GLK+FDDI+TRI HEV+EMEQL+Q+VGE+ LPGV +
Sbjct: 321 HAQRLGLKYFDDIRTRILRHEVQEMEQLLQRVGEETLPGVNI 362
Score = 117 bits (292), Expect(2) = 4e-65
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = -3
Query: 1096 SSSTSLYSPPDLNDNVTEIFKRLVDIYRALGEDRRSFSYYKAVQVIEKFPFKIENSDQIK 917
S STS+Y PPDLN N+TEIF +L++IYRALGEDRRSFSYYKA+ VIEKFP KIE+ DQ+K
Sbjct: 189 SESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTKIESIDQLK 248
Query: 916 DLPGVGKSLKDH 881
LPG+GKS++DH
Sbjct: 249 HLPGIGKSMRDH 260
Score = 55.1 bits (131), Expect(2) = 3e-11
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -3
Query: 1558 RIKSTPSDPNGILAGFIVYFVENGVQNRRLQIWKQKLRQMGGI 1430
R +S DP G+ AG +V+ VE GVQ RR QIWKQKL QMG +
Sbjct: 7 RNRSPSPDPEGMFAGMVVFMVEIGVQRRRFQIWKQKLVQMGAV 49
Score = 40.8 bits (94), Expect(2) = 3e-11
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -2
Query: 1418 LGKFDRHQLERSKALVLLYQWLEDSLREGKGVPERTYIIAMKSTGMEPPS 1269
L KF + +L + ++LYQWLEDSL G+ E Y + + S +E P+
Sbjct: 71 LDKFGKERLSHFRGRLMLYQWLEDSLTAGEKANEDLYALNIDSEEVEEPN 120
>ref|NP_172522.2| DNA polymerase lambda subunit [Arabidopsis thaliana]
gi|12053869|emb|CAC21394.1| DNA polymerase lambda
[Arabidopsis thaliana] gi|91805767|gb|ABE65612.1| DNA
polymerase lambda [Arabidopsis thaliana]
gi|304440990|gb|ADM33939.1| DNA pol lambda [Arabidopsis
thaliana] gi|332190467|gb|AEE28588.1| DNA polymerase
lambda subunit [Arabidopsis thaliana]
Length = 529
Score = 161 bits (407), Expect(2) = 7e-65
Identities = 76/102 (74%), Positives = 92/102 (90%)
Frame = -1
Query: 786 IQ*IVRTGKLSKLEFLESNEKVRTITLFGEVWGIGPATALRLYEKGHRNLDELKNEDTLT 607
IQ IV TGKLSKLE E++EKVRTI+LFGEVWG+GPATAL+LYEKGHR L++LKNED+LT
Sbjct: 261 IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGVGPATALKLYEKGHRTLEDLKNEDSLT 320
Query: 606 QAQRIGLKFFDDIKTRIPHHEVREMEQLVQKVGEQVLPGVRL 481
AQ++GLK+FDDIKTRIP EV+EMEQL+Q+VGE+ LPGV +
Sbjct: 321 HAQKLGLKYFDDIKTRIPRQEVQEMEQLLQRVGEETLPGVNI 362
Score = 114 bits (286), Expect(2) = 7e-65
Identities = 51/72 (70%), Positives = 64/72 (88%)
Frame = -3
Query: 1096 SSSTSLYSPPDLNDNVTEIFKRLVDIYRALGEDRRSFSYYKAVQVIEKFPFKIENSDQIK 917
S STS+Y PPDLN N+TEIF +L++IYRALGEDRRSFSYYKA+ VIEKFP +IE+ DQ+K
Sbjct: 189 SESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTRIESVDQLK 248
Query: 916 DLPGVGKSLKDH 881
LPG+GK+++DH
Sbjct: 249 HLPGIGKAMRDH 260
Score = 57.4 bits (137), Expect(2) = 3e-12
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = -3
Query: 1558 RIKSTPSDPNGILAGFIVYFVENGVQNRRLQIWKQKLRQMGGIAKD 1421
R +S DP G+ AG +V+ VE GVQ RRLQIWKQKL QMG + ++
Sbjct: 7 RNRSPSPDPEGMFAGMVVFMVEIGVQRRRLQIWKQKLVQMGAVIEE 52
Score = 42.0 bits (97), Expect(2) = 3e-12
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 1427 KGFLGKFDRHQLERSKALVLLYQWLEDSLREGKGVPERTYIIAMKSTGMEPP 1272
+ L KF + +L A ++LYQWLEDSL G+ E Y++ + S ++ P
Sbjct: 68 EALLHKFGKERLSHFTARLMLYQWLEDSLTSGEKANEDLYVLKIDSEEVDKP 119
>ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|222863765|gb|EEF00896.1|
predicted protein [Populus trichocarpa]
Length = 508
Score = 159 bits (402), Expect(2) = 9e-64
Identities = 75/100 (75%), Positives = 90/100 (90%)
Frame = -1
Query: 786 IQ*IVRTGKLSKLEFLESNEKVRTITLFGEVWGIGPATALRLYEKGHRNLDELKNEDTLT 607
IQ IV TGKLSKLE E++EKVRTI+LFGEVWGIGPATAL+ YEKGHR L++LKNED+LT
Sbjct: 240 IQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKFYEKGHRTLEDLKNEDSLT 299
Query: 606 QAQRIGLKFFDDIKTRIPHHEVREMEQLVQKVGEQVLPGV 487
+Q++GLK+FDDIKTRIP HEV+EME L+QK GE++LPGV
Sbjct: 300 HSQKLGLKYFDDIKTRIPRHEVQEMELLLQKTGEEILPGV 339
Score = 112 bits (281), Expect(2) = 9e-64
Identities = 48/66 (72%), Positives = 62/66 (93%)
Frame = -3
Query: 1078 YSPPDLNDNVTEIFKRLVDIYRALGEDRRSFSYYKAVQVIEKFPFKIENSDQIKDLPGVG 899
YSPPDLN ++TEIF +L++IYRALG+DRRSFSYYKA+ V+EK PFKIE++DQ+KDLPG+G
Sbjct: 174 YSPPDLNRSITEIFGKLINIYRALGDDRRSFSYYKAIPVVEKLPFKIESADQVKDLPGIG 233
Query: 898 KSLKDH 881
KS++DH
Sbjct: 234 KSMQDH 239
Score = 61.2 bits (147), Expect = 8e-07
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2
Query: 119 QKTLQN*ILQVDILCGGSYRRGKETCGDMDFIITHPDGR 3
QKT + + VDILCGGSYRRGK +CGD+D +ITHPDG+
Sbjct: 329 QKTGEEILPGVDILCGGSYRRGKASCGDLDIVITHPDGK 367
Score = 60.5 bits (145), Expect = 1e-06
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = -3
Query: 1561 KRIKSTPSDPNGILAGFIVYFVENGVQNRRLQIWKQKLRQMGGIAKD 1421
KR KS DP GI +G +V+ VE GVQ+RRLQIWKQKL QMG ++
Sbjct: 4 KRKKSPSIDPQGIFSGMVVFLVETGVQSRRLQIWKQKLVQMGATTEE 50
>gb|EEC80296.1| hypothetical protein OsI_22314 [Oryza sativa Indica Group]
Length = 1863
Score = 153 bits (386), Expect(2) = 3e-63
Identities = 71/97 (73%), Positives = 86/97 (88%)
Frame = -1
Query: 777 IVRTGKLSKLEFLESNEKVRTITLFGEVWGIGPATALRLYEKGHRNLDELKNEDTLTQAQ 598
IV TGKLSKLE E++EKVRT++LFGEVWG+GPATAL+LY+KGHR LD+L+ +D+LT AQ
Sbjct: 1598 IVNTGKLSKLEHFENDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQ 1657
Query: 597 RIGLKFFDDIKTRIPHHEVREMEQLVQKVGEQVLPGV 487
RIGLKFFDDIK RIP HEV EME+L+Q+VG +LPGV
Sbjct: 1658 RIGLKFFDDIKQRIPRHEVSEMEKLLQEVGTDILPGV 1694
Score = 117 bits (293), Expect(2) = 3e-63
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -3
Query: 1099 NSSSTSLYSPPDLNDNVTEIFKRLVDIYRALGEDRRSFSYYKAVQVIEKFPFKIENSDQI 920
+S +S Y+PPDLN N+TEIF +L++IYRALG+DRRSFSYYKA+ VIEK PFKIE++DQ+
Sbjct: 1522 SSGESSTYAPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKLPFKIESADQV 1581
Query: 919 KDLPGVGKSLKDH 881
KDLP +GKSLKDH
Sbjct: 1582 KDLPAIGKSLKDH 1594
>gb|EEE65406.1| hypothetical protein OsJ_20743 [Oryza sativa Japonica Group]
Length = 578
Score = 153 bits (386), Expect(2) = 3e-63
Identities = 71/97 (73%), Positives = 86/97 (88%)
Frame = -1
Query: 777 IVRTGKLSKLEFLESNEKVRTITLFGEVWGIGPATALRLYEKGHRNLDELKNEDTLTQAQ 598
IV TGKLSKLE E++EKVRT++LFGEVWG+GPATAL+LY+KGHR LD+L+ +D+LT AQ
Sbjct: 313 IVNTGKLSKLEHFENDEKVRTVSLFGEVWGVGPATALKLYDKGHRTLDDLQKDDSLTSAQ 372
Query: 597 RIGLKFFDDIKTRIPHHEVREMEQLVQKVGEQVLPGV 487
RIGLKFFDDIK RIP HEV EME+L+Q+VG +LPGV
Sbjct: 373 RIGLKFFDDIKQRIPRHEVSEMEKLLQEVGTDILPGV 409
Score = 117 bits (293), Expect(2) = 3e-63
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = -3
Query: 1099 NSSSTSLYSPPDLNDNVTEIFKRLVDIYRALGEDRRSFSYYKAVQVIEKFPFKIENSDQI 920
+S +S Y+PPDLN N+TEIF +L++IYRALG+DRRSFSYYKA+ VIEK PFKIE++DQ+
Sbjct: 237 SSGESSTYAPPDLNRNITEIFGKLINIYRALGDDRRSFSYYKAIPVIEKLPFKIESADQV 296
Query: 919 KDLPGVGKSLKDH 881
KDLP +GKSLKDH
Sbjct: 297 KDLPAIGKSLKDH 309