BLASTX nr result

ID: Lithospermum22_contig00007731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007731
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...   119   5e-25
ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
gb|AAL38256.1| putative protein [Arabidopsis thaliana] gi|280590...    95   1e-17
ref|NP_567055.1| glycoside hydrolase family 28 protein / polygal...    95   1e-17
emb|CAB41176.1| putative protein [Arabidopsis thaliana]                95   1e-17

>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score =  119 bits (298), Expect = 5e-25
 Identities = 73/155 (47%), Positives = 90/155 (58%), Gaps = 2/155 (1%)
 Frame = -1

Query: 533 LINMIVQFLQHLLILIFAIQSHCATS--PFSILHSTPSLSLSVLDFNATASGLCYDTHHI 360
           +  +++  L  +LI I  IQSH  TS  P +I     +++LSV DF AT +G  YDT  I
Sbjct: 1   MTTLLIIHLITVLIQISLIQSHPDTSLLPSTIQLPRQTITLSVTDFGATGNGHDYDTVPI 60

Query: 359 QSTIDACATAALPNTTCHVIFPPGKYLTATIHLRSRVVLNITKGAVILGGTKLEDXXXXX 180
           QSTIDAC     P TTCHV FPPGKYLTATIHL+S+VVL I KGA +LG           
Sbjct: 61  QSTIDACP----PTTTCHVKFPPGKYLTATIHLKSKVVLEIQKGATLLG----------- 105

Query: 179 XXXXXXXXXXXXXXXXGTKLEDYPEQQERWYVVLA 75
                           GT++EDYP++  RWYVVLA
Sbjct: 106 ----------------GTRMEDYPKEFSRWYVVLA 124


>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  106 bits (265), Expect = 3e-21
 Identities = 66/146 (45%), Positives = 77/146 (52%)
 Frame = -1

Query: 440 HSTPSLSLSVLDFNATASGLCYDTHHIQSTIDACATAALPNTTCHVIFPPGKYLTATIHL 261
           H TP+ +LSV DF A   G+ YDT  IQSTI++C T   P   CHV FPPG YLTATIHL
Sbjct: 7   HPTPT-TLSVTDFGAIGDGIHYDTEAIQSTINSCPTTP-PTKACHVNFPPGIYLTATIHL 64

Query: 260 RSRVVLNITKGAVILGGTKLEDXXXXXXXXXXXXXXXXXXXXXGTKLEDYPEQQERWYVV 81
           +S VVLNI +GA +LGG                           TKLEDYP++  RWYVV
Sbjct: 65  KSNVVLNIQEGATLLGG---------------------------TKLEDYPKEFNRWYVV 97

Query: 80  LAXXXXXXXXXXXXXXXXXGLEFVTR 3
           LA                 GL+FV R
Sbjct: 98  LAENASDVGITGGGVVDGQGLKFVKR 123


>gb|AAL38256.1| putative protein [Arabidopsis thaliana] gi|28059069|gb|AAO29984.1|
           putative protein [Arabidopsis thaliana]
          Length = 325

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -1

Query: 500 LLILIFA-IQSHCATSPFSILHSTPSLSLSVLDFNATASGLCYDTHHIQSTIDACATAAL 324
           LL+L F+ +QS   TS   I     SL+LSV DF AT  G+ YDT  IQSTIDAC     
Sbjct: 7   LLLLFFSLVQSRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYT 66

Query: 323 P-NTTCHVIFPPGKYLTATIHLRSRVVLNITKGAVILGGTKLED 195
             ++ C V+FP G YLTA +HLRS V+L++T+ AV+LGG ++ED
Sbjct: 67  SFSSICRVVFPSGNYLTAKLHLRSGVILDVTENAVLLGGPRIED 110


>ref|NP_567055.1| glycoside hydrolase family 28 protein / polygalacturonase
           (pectinase) family protein [Arabidopsis thaliana]
           gi|332646180|gb|AEE79701.1| glycoside hydrolase family
           28 protein / polygalacturonase (pectinase) family
           protein [Arabidopsis thaliana]
          Length = 490

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -1

Query: 500 LLILIFA-IQSHCATSPFSILHSTPSLSLSVLDFNATASGLCYDTHHIQSTIDACATAAL 324
           LL+L F+ +QS   TS   I     SL+LSV DF AT  G+ YDT  IQSTIDAC     
Sbjct: 7   LLLLFFSLVQSRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYT 66

Query: 323 P-NTTCHVIFPPGKYLTATIHLRSRVVLNITKGAVILGGTKLED 195
             ++ C V+FP G YLTA +HLRS V+L++T+ AV+LGG ++ED
Sbjct: 67  SFSSICRVVFPSGNYLTAKLHLRSGVILDVTENAVLLGGPRIED 110


>emb|CAB41176.1| putative protein [Arabidopsis thaliana]
          Length = 614

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -1

Query: 500 LLILIFA-IQSHCATSPFSILHSTPSLSLSVLDFNATASGLCYDTHHIQSTIDACATAAL 324
           LL+L F+ +QS   TS   I     SL+LSV DF AT  G+ YDT  IQSTIDAC     
Sbjct: 7   LLLLFFSLVQSRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHYT 66

Query: 323 P-NTTCHVIFPPGKYLTATIHLRSRVVLNITKGAVILGGTKLED 195
             ++ C V+FP G YLTA +HLRS V+L++T+ AV+LGG ++ED
Sbjct: 67  SFSSICRVVFPSGNYLTAKLHLRSGVILDVTENAVLLGGPRIED 110


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