BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007582
         (2981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]                1054   0.0  
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]      1047   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]              1033   0.0  
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]            1026   0.0  
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...  1024   0.0  

>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
          Length = 910

 Score = 1054 bits (2726), Expect = 0.0
 Identities = 575/918 (62%), Positives = 651/918 (70%), Gaps = 39/918 (4%)
 Frame = -2

Query: 2866 MAVDTCSNRSLMEDIDSEEDAPLVFKXXXXXXXXXXXXXXXNKVSSQKPDGQTGRRASDA 2687
            MAV+ C   +L +D+D E+D P+VFK                KVSSQK DGQ+ R+  D+
Sbjct: 1    MAVEACPTPNLRDDMD-EDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDS 59

Query: 2686 RSACGGSTSGSNGKKVPSAKASSDTSSLAGS--------------KASTLSSKVPP-SRF 2552
            R A G S+SG  G+ VP +K S   S L+                K ST S+K  P S  
Sbjct: 60   RPANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSL 119

Query: 2551 PGGTPKMTSAIADHGEKLNQSIPKTVVKQEKLYAEPSTQAP----DFSDSEDDVPLSTRV 2384
            P  +   TS  +   +  NQ    TV+K+EK  + P   A     D  DS+D  PLS R 
Sbjct: 120  PANSKPSTSG-SFKVKPFNQHKSATVIKEEK--SSPLRLASAIINDSEDSDDGKPLSLR- 175

Query: 2383 KSKADSSINIPQGSNSTSRPIIPKKEDSEDEKPLSSKFK-RDTTGASSSKCRDSEDEKPL 2207
             S + S  N  Q S   S+P   + EDS+DEKPLSS+F  +   G S+SK  DS+D+KPL
Sbjct: 176  HSASSSKGNTNQVSKEGSKP---ENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPL 232

Query: 2206 ARKIQQNGSVLAKKSPV----VLNKRPSTDSKSSVHSSIKKPKLSDASMSTNSRTAPVKT 2039
            A+K+Q NGS +    P     + NKRP  D KSS   S+KKPKLS  +  TN + A VK 
Sbjct: 233  AKKLQHNGSAMRDGQPNKYSNMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKP 292

Query: 2038 EPKIKEDND-RIPLSQRIKQSGXXXXXXXXXXXXXXXXXXXXXXXXXKT----------- 1895
            EPK ++D+D  +P+SQRIK+S                          K+           
Sbjct: 293  EPKAEDDDDDHLPISQRIKKSPTSESKSSSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSK 352

Query: 1894 -SKYVPSSSGGQKWKSLVHNGVIFPPPYQPHGVKMLYKKKPVHLTPEQEEVATMYAVMLD 1718
             SK  PSS  G+KW  L HNGVIFPPPY+PHG+KMLYK KPV LTPEQEEVATM+AVMLD
Sbjct: 353  SSKVPPSSGEGKKWNKLEHNGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLD 412

Query: 1717 TDYLNKSRFRENFFNDWKKILGKNHVIQNLEDCDFSPIYEWHXXXXXXXXXXXXXXXXXX 1538
            TDY+NK RF+ENFF DWKKILGKNHVIQNLE+CDFSPIYEWH                  
Sbjct: 413  TDYMNKPRFKENFFGDWKKILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKAL 472

Query: 1537 XXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIG 1358
                     KYMWA VDG KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+P DITINIG
Sbjct: 473  KEEKLKQEEKYMWAWVDGKKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIG 532

Query: 1357 KGVPIPECPVPGERWKEIRHDNTVTWLAFWNDPINSKEFKYVFLAASSTLKGQSDKEKYE 1178
            K  PIPECPVPGERWKE+RHDNTVTWLAFWNDPIN KEFKYVFLAASSTLKG SDKEKYE
Sbjct: 533  KDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYE 592

Query: 1177 KARKLTDHIDKIREAYTKNFTSKDATKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 998
            KAR L D+I  IR AYTK+F SKD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 593  KARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 652

Query: 997  LKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVVPPVFEAIQKFRKGKKGGDDLFDMLDTS 818
            LKVENVEPVPPN LKFDFLGKDSIRYQNEVEV   VF+AIQ+FR GK+G  DLFD+LDTS
Sbjct: 653  LKVENVEPVPPNILKFDFLGKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTS 712

Query: 817  KLNAHLKELVPGLTAKVFRTYNASRTLDDLLTAETNGEDVTENIVIYQRANKEVAIICNH 638
            KLNAHLKEL+PGLTAKVFRTYNAS TLDD+L+ ET G DV E +V+YQ ANKEVAIICNH
Sbjct: 713  KLNAHLKELMPGLTAKVFRTYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNH 772

Query: 637  QRTVSKSHGQQMERLDEKIKELNNVLDELKVDLDRAKKGKSPL--KGADGKTKRNLGPEA 464
            QRTVSKSH  QM RL+EKI+EL  V++ELK DL R KKGK PL  K ADGK KRNL PE+
Sbjct: 773  QRTVSKSHSAQMLRLNEKIEELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPES 832

Query: 463  IEKKMAQTYAKIEKMERDKTSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNK 284
            +EKK+AQT AKIEKMERDK +KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNK
Sbjct: 833  LEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 892

Query: 283  SLLAKFSWAMDVDPSFRF 230
            SLLAKF+WAMDVDPSFRF
Sbjct: 893  SLLAKFTWAMDVDPSFRF 910


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 562/933 (60%), Positives = 650/933 (69%), Gaps = 54/933 (5%)
 Frame = -2

Query: 2866 MAVDTCSNRSLMEDIDSEEDAPLVFKXXXXXXXXXXXXXXXNKVSSQKPDGQTGRRASDA 2687
            MAV+ C+  +LMED++ ++  P++FK                K+S QK DGQ+    SD 
Sbjct: 1    MAVEACTT-NLMEDME-DDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDV 58

Query: 2686 RSACGGSTSGSNGKKVPSAKASSDTSSLAGSKASTLSSKVPPSRFPGGTPKMTSAIADHG 2507
            R A G S+S   G+  PSAK     S L+  KAS  S+K  P   PG   K +++     
Sbjct: 59   RPANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTA 118

Query: 2506 EKLNQSIPKTVVKQEKLYAEPSTQAP------DFSDSEDDVPLSTRV---KSKADSSINI 2354
            ++ N        K    + EP    P      +   S+D+ PLS R     SK  S+   
Sbjct: 119  KQQNHH------KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHAN 172

Query: 2353 PQGSNSTS--RPIIPKKEDSEDEKPLSSKF-KRDTTGASSSKCRDSEDEKPLARKIQQNG 2183
             +G +S S  RP+I + EDSEDEKPLS +F  + + G S+SK  DS+++KPLA K+QQNG
Sbjct: 173  KEGGDSCSIRRPVIEESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNG 232

Query: 2182 SVLA----KKSPVVLNKRPSTDSKSSVHSSIKKPKLSDASMSTNSRTAPVKTEPKIKEDN 2015
            S        KS  + NKRP  ++KS   SS+KKPKLS    S +++ A VK EPK ++D+
Sbjct: 233  SASRDGPMNKSASLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDD 292

Query: 2014 DRIPLSQ------------------------RIKQSGXXXXXXXXXXXXXXXXXXXXXXX 1907
            D IPLSQ                        RIK+S                        
Sbjct: 293  DNIPLSQRGKKSQSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKK 352

Query: 1906 XXKTSKYV-------------PSSSGGQKWKSLVHNGVIFPPPYQPHGVKMLYKKKPVHL 1766
              K SK V             P S  GQKW +LVHNGVIFPPPY+PHGVKMLYK++P+ L
Sbjct: 353  VNKNSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITL 412

Query: 1765 TPEQEEVATMYAVMLDTDYLNKSRFRENFFNDWKKILGKNHVIQNLEDCDFSPIYEWHXX 1586
            TPEQEEVATM+AVMLDTDY+NK  F+ENFF+DWKKILGKNH+IQNLEDCDF PIYEWH  
Sbjct: 413  TPEQEEVATMFAVMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQ 472

Query: 1585 XXXXXXXXXXXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 1406
                                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG
Sbjct: 473  EKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 532

Query: 1405 KLKRRIQPSDITINIGKGVPIPECPVPGERWKEIRHDNTVTWLAFWNDPINSKEFKYVFL 1226
            KLK+RI+P DITINIGK  PIPECP+PGERWKE+R+ NTVTWLA+WNDPIN KEFKYVFL
Sbjct: 533  KLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFL 592

Query: 1225 AASSTLKGQSDKEKYEKARKLTDHIDKIREAYTKNFTS-KDATKRQIAVATYLIDKLALR 1049
            AASSTLKGQSDKEKYEKAR L D+I  IR AYTK+FT+ KD  K+QIAVATYLIDKLALR
Sbjct: 593  AASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALR 652

Query: 1048 AGNEKDDDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVVPPVFEAIQKF 869
            AGNEKDDDEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+V P VF+AIQ+F
Sbjct: 653  AGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQF 712

Query: 868  RKGKKGGDDLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASRTLDDLLTAETNGEDVTEN 689
            R GK+G +DLFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+L+ ET G +V EN
Sbjct: 713  RSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEN 772

Query: 688  IVIYQRANKEVAIICNHQRTVSKSHGQQMERLDEKIKELNNVLDELKVDLDRAKKGKSPL 509
            +V+YQ ANKEVAIICNHQRTVSKSH  QM RL+EKI EL   L+ELK DL RAKKGK P 
Sbjct: 773  VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPT 832

Query: 508  KGADGKTKRNLGPEAIEKKMAQTYAKIEKMERDKTSKEDLKTVALGTSKINYLDPRITVA 329
            KGADGK KRNL PEA+E+K+ QT AKIEKMERDK +KEDLKTVALGTSKINYLDPRITVA
Sbjct: 833  KGADGKAKRNLNPEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVA 892

Query: 328  WCKRHEVPIEKMFNKSLLAKFSWAMDVDPSFRF 230
            WCKRHEVPIEK+FNKSLLAKF+W+MDVDPSFRF
Sbjct: 893  WCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 925


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 1033 bits (2672), Expect = 0.0
 Identities = 561/906 (61%), Positives = 648/906 (71%), Gaps = 27/906 (2%)
 Frame = -2

Query: 2866 MAVDTCSNRSLMEDIDSEEDAPLVFKXXXXXXXXXXXXXXXNKVSSQKPDGQTGRRASDA 2687
            MAV  C    +M++ID E+D PLVFK                K SSQ+ DGQ+GR+ SD 
Sbjct: 1    MAVQACVKEKMMDEID-EDDEPLVFKRSNATSKHNQLNSDTKK-SSQRYDGQSGRQVSDV 58

Query: 2686 RSACGGSTSGSNGKKVPSAKASSDTSSLAGSKASTLSSKVPPSRFPGGTPKMTSAIADHG 2507
             S  G S+S S GK   + K SS  S +A  KAST  +K  P       PK++S+  D  
Sbjct: 59   PSTNGQSSSASKGK---TTKLSSMKSPIASPKASTSFAKASPV----ANPKVSSSSDDRS 111

Query: 2506 EKLNQSIPKTVVKQEKLYAEPSTQAPDFSDSEDDVPLSTRVKS--KADSSINIPQG---S 2342
            +  ++     VVK+EK    P+  A  + DSED+ PLS R+ +     SS N  +G   S
Sbjct: 112  KHSSKQNTINVVKEEKELVNPA--AEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLINS 169

Query: 2341 NSTSRPIIPKKE------DSEDEKPLSSKFK-RDTTGASSSKCRDSEDEKPLARKIQQNG 2183
            +  S P+ PK E      DS+DE PLSSKF+ +   G S+ K  +S+D K L    QQNG
Sbjct: 170  SPASLPV-PKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNG 228

Query: 2182 SV-LAKKSPVVLNKRPSTDSKSSVHSSIKKPKLSDASMSTNSRTAPVKTEPKIKE-DNDR 2009
            S+    KS + +NKRP  + KSSV SS+KKPKLSDAS   N++ A  K EPK  + D+D 
Sbjct: 229  SINRGSKSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDH 288

Query: 2008 IPLSQRIKQSGXXXXXXXXXXXXXXXXXXXXXXXXXK-------------TSKYVPSSSG 1868
            +P+SQR+K+S                          K             +SK  PSS  
Sbjct: 289  VPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGE 348

Query: 1867 GQKWKSLVHNGVIFPPPYQPHGVKMLYKKKPVHLTPEQEEVATMYAVMLDTDYLNKSRFR 1688
            G+KW +LVHNGVIFPPPY+PHGVKMLYK KPV LTPEQEEVATM+AVMLDTDY+ KS+F+
Sbjct: 349  GKKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFK 408

Query: 1687 ENFFNDWKKILGKNHVIQNLEDCDFSPIYEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXK 1508
            ENF +DW+KILGKNHVIQNLEDCDF+PIYEWH                           K
Sbjct: 409  ENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEK 468

Query: 1507 YMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIQPSDITINIGKGVPIPECPV 1328
            YMWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLK+ I+PSDITINIGK  PIPECP+
Sbjct: 469  YMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPI 528

Query: 1327 PGERWKEIRHDNTVTWLAFWNDPINSKEFKYVFLAASSTLKGQSDKEKYEKARKLTDHID 1148
            PGE WKEIRHDNTVTWLAFWNDPI  +EFKYVFLAASS+LKGQSDKEKYEKAR L D I 
Sbjct: 529  PGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQ 588

Query: 1147 KIREAYTKNFTSKDATKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVP 968
             IR AYTK+F SKD TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEP P
Sbjct: 589  GIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKP 648

Query: 967  PNTLKFDFLGKDSIRYQNEVEVVPPVFEAIQKFRKGKKGGDDLFDMLDTSKLNAHLKELV 788
            P+ LKFDFLGKDSIRYQNEVEV  PV++AIQ+FR GK+GGDDLFD LDTSKLNAHLK L+
Sbjct: 649  PSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLM 708

Query: 787  PGLTAKVFRTYNASRTLDDLLTAETNGEDVTENIVIYQRANKEVAIICNHQRTVSKSHGQ 608
            PGLTAKVFRTYNAS TLD++L+ ET G +V E IV+YQ ANKEVAIICNHQRTVSKSH  
Sbjct: 709  PGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPA 768

Query: 607  QMERLDEKIKELNNVLDELKVDLDRAKKGKSPLKGADGKTKRNLGPEAIEKKMAQTYAKI 428
            QM RL+ KI EL  +LD L+ DL RAKKGK PL+ ADGK KRNL PEA+E+K+ QT AKI
Sbjct: 769  QMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKI 828

Query: 427  EKMERDKTSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFSWAMDV 248
            EKMERDK +KE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKSLLAKF+W+MDV
Sbjct: 829  EKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDV 888

Query: 247  DPSFRF 230
            DPSFRF
Sbjct: 889  DPSFRF 894


>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
          Length = 920

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 552/926 (59%), Positives = 640/926 (69%), Gaps = 54/926 (5%)
 Frame = -2

Query: 2866 MAVDTCSNRSLMEDIDSEEDAPLVFKXXXXXXXXXXXXXXXNKVSSQKPDGQTGRRASDA 2687
            MAV+ C+  +LMED++ +E  P++FK                K+S QK  GQ+    SD 
Sbjct: 1    MAVEACTTTNLMEDMEDDE-GPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDV 59

Query: 2686 RSACGGSTSGSNGKKVPSAKASSDTSSLAGSKASTLSSKVPPSRFPGGTPKMTSAIADHG 2507
            R A G ++S   G+  PSAK     S L+  KAS  S+K  P   PG   K +++     
Sbjct: 60   RPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTA 119

Query: 2506 EKLNQSIPKTVVKQEKLYAEPSTQAP------DFSDSEDDVPLSTRV---KSKADSSINI 2354
            ++ N        K    + EP    P      +   S+D+ PLS R     SK  S+   
Sbjct: 120  KQQNHH------KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHAN 173

Query: 2353 PQGSNSTS--RPIIPKKEDSEDEKPLSSKF-KRDTTGASSSKCRDSEDEKPLARKIQQNG 2183
             +G +S S  RP+I + EDSEDEKPLS +F  + + G S+SK  DS+++KPLA K+Q NG
Sbjct: 174  KEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNG 233

Query: 2182 SVLA----KKSPVVLNKRPSTDSKSSVHSSIKKPKLSDASMSTNSRTAPVKTEPKIKEDN 2015
            S        KS  + NKRP  + KS   SS+KKPKLS    S +++ A VK EPK ++D+
Sbjct: 234  SASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDD 293

Query: 2014 DRIPLS------------------------QRIKQSGXXXXXXXXXXXXXXXXXXXXXXX 1907
            D IPLS                        QRIK+S                        
Sbjct: 294  DNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKK 353

Query: 1906 XXKTSKYV-------------PSSSGGQKWKSLVHNGVIFPPPYQPHGVKMLYKKKPVHL 1766
              K SK V             P S  GQKW +LVHNGVIFPPPY+PHGVKMLYK++P+ L
Sbjct: 354  VNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITL 413

Query: 1765 TPEQEEVATMYAVMLDTDYLNKSRFRENFFNDWKKILGKNHVIQNLEDCDFSPIYEWHXX 1586
            TPEQEEVATM+AVMLDTDY+NK RF+ENFF+DWKK+LGKNH IQNLEDCDF PIYEWH  
Sbjct: 414  TPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQ 473

Query: 1585 XXXXXXXXXXXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 1406
                                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG
Sbjct: 474  EKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 533

Query: 1405 KLKRRIQPSDITINIGKGVPIPECPVPGERWKEIRHDNTVTWLAFWNDPINSKEFKYVFL 1226
            KLK+RI+P DITINIGK  PIPECP+PGERWKE+R+DNTVTWLA+WNDPIN KEFKYVFL
Sbjct: 534  KLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFL 593

Query: 1225 AASSTLKGQSDKEKYEKARKLTDHIDKIREAYTKNFTS-KDATKRQIAVATYLIDKLALR 1049
            AASSTLKGQSDKEKYEKAR L D+I  IR AYTK+FT+ KD  K+QIAVATYLIDKLALR
Sbjct: 594  AASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALR 653

Query: 1048 AGNEKDDDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVVPPVFEAIQKF 869
            AGNEKDDDEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+V P VF+AI +F
Sbjct: 654  AGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQF 713

Query: 868  RKGKKGGDDLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASRTLDDLLTAETNGEDVTEN 689
            R GK+G +DLFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+L+ +TNG +V E 
Sbjct: 714  RSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEK 773

Query: 688  IVIYQRANKEVAIICNHQRTVSKSHGQQMERLDEKIKELNNVLDELKVDLDRAKKGKSPL 509
            +V+YQ ANKEVAIICNHQRTVSKSH  QM RL+EKI EL   L+ELK DL RAKKGK   
Sbjct: 774  VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLS 833

Query: 508  KGADGKTKRNLGPEAIEKKMAQTYAKIEKMERDKTSKEDLKTVALGTSKINYLDPRITVA 329
            KGADGK KRNL PEA+E+K+AQT AKIEKMERDK +KEDLKTVALGTSKINYLDPRITVA
Sbjct: 834  KGADGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVA 893

Query: 328  WCKRHEVPIEKMFNKSLLAKFSWAMD 251
            WCKRHEVPIEK+FNKSLLAKF+WAM+
Sbjct: 894  WCKRHEVPIEKIFNKSLLAKFAWAMN 919


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score = 1024 bits (2647), Expect = 0.0
 Identities = 551/926 (59%), Positives = 640/926 (69%), Gaps = 54/926 (5%)
 Frame = -2

Query: 2866 MAVDTCSNRSLMEDIDSEEDAPLVFKXXXXXXXXXXXXXXXNKVSSQKPDGQTGRRASDA 2687
            MAV+ C+  +LMED++ +E  P++FK                K+S Q+  GQ+    SD 
Sbjct: 1    MAVEACTTTNLMEDMEDDE-GPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDV 59

Query: 2686 RSACGGSTSGSNGKKVPSAKASSDTSSLAGSKASTLSSKVPPSRFPGGTPKMTSAIADHG 2507
            R A G ++S   G+  PSAK     S L+  KAS  S+K  P    G   K +++     
Sbjct: 60   RPANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTA 119

Query: 2506 EKLNQSIPKTVVKQEKLYAEPSTQAP------DFSDSEDDVPLSTRV---KSKADSSINI 2354
            ++ N        K    + EP    P      +   S+D+ PLS R     SK  S+   
Sbjct: 120  KQQNHH------KSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHAN 173

Query: 2353 PQGSNSTS--RPIIPKKEDSEDEKPLSSKF-KRDTTGASSSKCRDSEDEKPLARKIQQNG 2183
             +G +S S  RP+I + EDSEDEKPLS +F  + + G S+SK  DS+++KPLA K+Q NG
Sbjct: 174  KEGGDSCSIRRPVIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNG 233

Query: 2182 SVLA----KKSPVVLNKRPSTDSKSSVHSSIKKPKLSDASMSTNSRTAPVKTEPKIKEDN 2015
            S        KS  + NKRP  + KS   SS+KKPKLS    S +++ A VK EPK ++D+
Sbjct: 234  SASRDSPMNKSASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDD 293

Query: 2014 DRIPLS------------------------QRIKQSGXXXXXXXXXXXXXXXXXXXXXXX 1907
            D IPLS                        QRIK+S                        
Sbjct: 294  DNIPLSQRGKKSQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKK 353

Query: 1906 XXKTSKYV-------------PSSSGGQKWKSLVHNGVIFPPPYQPHGVKMLYKKKPVHL 1766
              K SK V             P S  GQKW +LVHNGVIFPPPY+PHGVKMLYK++P+ L
Sbjct: 354  VNKKSKKVIKKTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITL 413

Query: 1765 TPEQEEVATMYAVMLDTDYLNKSRFRENFFNDWKKILGKNHVIQNLEDCDFSPIYEWHXX 1586
            TPEQEEVATM+AVMLDTDY+NK RF+ENFF+DWKK+LGKNH IQNLEDCDF PIYEWH  
Sbjct: 414  TPEQEEVATMFAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQ 473

Query: 1585 XXXXXXXXXXXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 1406
                                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG
Sbjct: 474  EKEKKKQMTTEEKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMG 533

Query: 1405 KLKRRIQPSDITINIGKGVPIPECPVPGERWKEIRHDNTVTWLAFWNDPINSKEFKYVFL 1226
            KLK+RI+P DITINIGK  PIPECP+PGERWKE+R+DNTVTWLA+WNDPIN KEFKYVFL
Sbjct: 534  KLKKRIRPRDITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFL 593

Query: 1225 AASSTLKGQSDKEKYEKARKLTDHIDKIREAYTKNFTS-KDATKRQIAVATYLIDKLALR 1049
            AASSTLKGQSDKEKYEKAR L D+I  IR AYTK+FT+ KD  K+QIAVATYLIDKLALR
Sbjct: 594  AASSTLKGQSDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALR 653

Query: 1048 AGNEKDDDEADTVGCCTLKVENVEPVPPNTLKFDFLGKDSIRYQNEVEVVPPVFEAIQKF 869
            AGNEKDDDEADTVGCCTLKVENVEPVPPN LKFDFLGKDSIRYQNEV+V P VF+AIQ+F
Sbjct: 654  AGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQF 713

Query: 868  RKGKKGGDDLFDMLDTSKLNAHLKELVPGLTAKVFRTYNASRTLDDLLTAETNGEDVTEN 689
            R GK+G +DLFD LDTSKLNAHLKEL+PGLTAKVFRTYNAS TLDD+L+ +TNG +V E 
Sbjct: 714  RSGKEGSEDLFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEK 773

Query: 688  IVIYQRANKEVAIICNHQRTVSKSHGQQMERLDEKIKELNNVLDELKVDLDRAKKGKSPL 509
            +V+YQ ANKEVAIICNHQRTVSKSH  QM RL+EKI EL   L+ELK DL RAKKGK   
Sbjct: 774  VVVYQHANKEVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLS 833

Query: 508  KGADGKTKRNLGPEAIEKKMAQTYAKIEKMERDKTSKEDLKTVALGTSKINYLDPRITVA 329
            KGADGK KRNL PEA+E+K+AQT AKIEKMERDK +KEDLKTVALGTSKINYLDPRITVA
Sbjct: 834  KGADGKPKRNLNPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVA 893

Query: 328  WCKRHEVPIEKMFNKSLLAKFSWAMD 251
            WCKRHEVPIEK+FNKSLLAKF+WAM+
Sbjct: 894  WCKRHEVPIEKIFNKSLLAKFAWAMN 919