BLASTX nr result

ID: Lithospermum22_contig00007524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007524
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   290   7e-76
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   281   2e-73
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   280   7e-73
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   276   6e-72
gb|ACU24484.1| unknown [Glycine max]                                  271   2e-70

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  290 bits (741), Expect = 7e-76
 Identities = 144/197 (73%), Positives = 152/197 (77%)
 Frame = +3

Query: 390 MSGRYSRMIYVGNLPADIREYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESSHDAED 569
           MSGR+SR IYVGNLPADI+E E+EDLFYKYGRILDIELKIPPRPPCYCFVEFESS DAED
Sbjct: 1   MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60

Query: 570 AIRGRDGYNFDGCRLRVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDY 749
           AIRGRDGYNFDGCRLRVEL                                       DY
Sbjct: 61  AIRGRDGYNFDGCRLRVEL---AHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDY 117

Query: 750 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDT 929
           RVIIRGLPSSASWQDLKDHMRKAGDVCFAEV RDS+G +GLVDYTNYEDMKYAIRKLDDT
Sbjct: 118 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDT 177

Query: 930 EFKNPWTRTRIRVKEFK 980
           EF+NPWTRT IRV+E+K
Sbjct: 178 EFRNPWTRTYIRVREYK 194


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  281 bits (720), Expect = 2e-73
 Identities = 138/196 (70%), Positives = 149/196 (76%)
 Frame = +3

Query: 390 MSGRYSRMIYVGNLPADIREYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESSHDAED 569
           MSGR+SR IYVGNLP+DIREYEIEDLFYKYGRILD+ELKIPPRPPCYCFVEFE+S DAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 570 AIRGRDGYNFDGCRLRVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDY 749
           AIRGRDGYNFDGCRLRVEL                                       +Y
Sbjct: 61  AIRGRDGYNFDGCRLRVEL--------AHGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEY 112

Query: 750 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDT 929
           RVI+RGLPSSASWQDLKDHMRKAGDVCFAEV RD+DG +GLVDYTN+EDMKYAIRKLDDT
Sbjct: 113 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDT 172

Query: 930 EFKNPWTRTRIRVKEF 977
           EF+NPW R  IRVK +
Sbjct: 173 EFRNPWARAYIRVKRY 188


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  280 bits (715), Expect = 7e-73
 Identities = 136/199 (68%), Positives = 152/199 (76%)
 Frame = +3

Query: 390 MSGRYSRMIYVGNLPADIREYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESSHDAED 569
           MSGR+SR IYVGNLP+DIRE+E+EDLFYKYGRILDIELKIPPRPPCYCFVEFE++ DAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 570 AIRGRDGYNFDGCRLRVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDY 749
           AIRGRDGYNFDGCRLRVEL                                       ++
Sbjct: 61  AIRGRDGYNFDGCRLRVEL---AHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEF 117

Query: 750 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDT 929
           RVI+RGLPSSASWQDLKDHMRKAGDVCFAEV RDSDG +G+VDYTNYEDMKYAIRKLDDT
Sbjct: 118 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDT 177

Query: 930 EFKNPWTRTRIRVKEFKDT 986
           EF+NPW R  IRVK ++++
Sbjct: 178 EFRNPWARAYIRVKMYENS 196


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  276 bits (707), Expect = 6e-72
 Identities = 136/199 (68%), Positives = 150/199 (75%)
 Frame = +3

Query: 390 MSGRYSRMIYVGNLPADIREYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESSHDAED 569
           MSGR+SR IYVGNLPADIRE EIEDLFYKYGRILD+ELKIPPRPPCYCFVEFE++ DAED
Sbjct: 1   MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 570 AIRGRDGYNFDGCRLRVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDY 749
           AIRGRDGYNFDGCRLRVEL                                       ++
Sbjct: 61  AIRGRDGYNFDGCRLRVEL-------AHGGRGPSSNDRRGGYGGGGGSGGRFGISRHSEF 113

Query: 750 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDT 929
           RVI+RGLPSSASWQDLKDHMRKAGDVCFAEV RDSDG +G+VDYTN+EDMKYAIRKLDDT
Sbjct: 114 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDT 173

Query: 930 EFKNPWTRTRIRVKEFKDT 986
           EF+NPW R  IRVK+ + +
Sbjct: 174 EFRNPWARAYIRVKQHESS 192


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  271 bits (693), Expect = 2e-70
 Identities = 130/199 (65%), Positives = 150/199 (75%)
 Frame = +3

Query: 390 MSGRYSRMIYVGNLPADIREYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESSHDAED 569
           MSGR+SR IYVGNLP+DIRE EIEDLFYKYGRI+DIELK+PPRPPCYCFVEF+++ DAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 570 AIRGRDGYNFDGCRLRVELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDY 749
           AIRGRDGYNFDGCRLRVEL                                       ++
Sbjct: 61  AIRGRDGYNFDGCRLRVEL----AHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEF 116

Query: 750 RVIIRGLPSSASWQDLKDHMRKAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDT 929
           RVI+RGLPSSASWQDLKDHMRKAGDVCFAEV RDS+G +G+VDYTNY+DMKYAIRKLDD 
Sbjct: 117 RVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDA 176

Query: 930 EFKNPWTRTRIRVKEFKDT 986
           EF+NPW R  IRV++++ +
Sbjct: 177 EFRNPWARAYIRVRKYESS 195


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