BLASTX nr result

ID: Lithospermum22_contig00007523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007523
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   298   2e-78
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   289   1e-75
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati...   287   5e-75
ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|2...   284   4e-74
gb|ACU24484.1| unknown [Glycine max]                                  283   1e-73

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  298 bits (763), Expect = 2e-78
 Identities = 147/196 (75%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
 Frame = +2

Query: 326 MSGRYSRMIYVGNLPADIREYEVEDLFYKYGRILDIELKIPPRPPCFCFVEFESSRDAED 505
           MSGR+SR IYVGNLPADI+E EVEDLFYKYGRILDIELKIPPRPPC+CFVEFESSRDAED
Sbjct: 1   MSGRFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAED 60

Query: 506 AIRGRDGYNFDGCRLRVELA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDYRVI 682
           AIRGRDGYNFDGCRLRVELA                                 HSDYRVI
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVI 120

Query: 683 IRGLPSSASWQDLKDHMRRAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDTEFK 862
           IRGLPSSASWQDLKDHMR+AGDVCFAEV RDS+G +GLVDYTNYEDMKYAIRKLDDTEF+
Sbjct: 121 IRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFR 180

Query: 863 NPWMRTRIRVKEFKGN 910
           NPW RT IRV+E+KG+
Sbjct: 181 NPWTRTYIRVREYKGS 196


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
           product [Vitis vinifera]
          Length = 250

 Score =  289 bits (739), Expect = 1e-75
 Identities = 139/192 (72%), Positives = 153/192 (79%)
 Frame = +2

Query: 326 MSGRYSRMIYVGNLPADIREYEVEDLFYKYGRILDIELKIPPRPPCFCFVEFESSRDAED 505
           MSGR+SR IYVGNLP+DIREYE+EDLFYKYGRILD+ELKIPPRPPC+CFVEFE+SRDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAED 60

Query: 506 AIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDYRVII 685
           AIRGRDGYNFDGCRLRVELA                                HS+YRVI+
Sbjct: 61  AIRGRDGYNFDGCRLRVELA----HGGRGQSSSSDRRGGHGSGGGGRFGVSRHSEYRVIV 116

Query: 686 RGLPSSASWQDLKDHMRRAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDTEFKN 865
           RGLPSSASWQDLKDHMR+AGDVCFAEV RD+DG +GLVDYTN+EDMKYAIRKLDDTEF+N
Sbjct: 117 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKLDDTEFRN 176

Query: 866 PWMRTRIRVKEF 901
           PW R  IRVK +
Sbjct: 177 PWARAYIRVKRY 188


>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223540939|gb|EEF42497.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 264

 Score =  287 bits (734), Expect = 5e-75
 Identities = 139/196 (70%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = +2

Query: 326 MSGRYSRMIYVGNLPADIREYEVEDLFYKYGRILDIELKIPPRPPCFCFVEFESSRDAED 505
           MSGR+SR IYVGNLP+DIRE+EVEDLFYKYGRILDIELKIPPRPPC+CFVEFE++RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED 60

Query: 506 AIRGRDGYNFDGCRLRVELA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDYRVI 682
           AIRGRDGYNFDGCRLRVELA                                 HS++RVI
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI 120

Query: 683 IRGLPSSASWQDLKDHMRRAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDTEFK 862
           +RGLPSSASWQDLKDHMR+AGDVCFAEV RDSDG +G+VDYTNYEDMKYAIRKLDDTEF+
Sbjct: 121 VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFR 180

Query: 863 NPWMRTRIRVKEFKGN 910
           NPW R  IRVK ++ +
Sbjct: 181 NPWARAYIRVKMYENS 196


>ref|XP_002321360.1| predicted protein [Populus trichocarpa] gi|222868356|gb|EEF05487.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  284 bits (726), Expect = 4e-74
 Identities = 137/195 (70%), Positives = 154/195 (78%)
 Frame = +2

Query: 326 MSGRYSRMIYVGNLPADIREYEVEDLFYKYGRILDIELKIPPRPPCFCFVEFESSRDAED 505
           MSGR+SR IYVGNLPADIRE E+EDLFYKYGRILD+ELKIPPRPPC+CFVEFE++RDAED
Sbjct: 1   MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED 60

Query: 506 AIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDYRVII 685
           AIRGRDGYNFDGCRLRVELA                                HS++RVI+
Sbjct: 61  AIRGRDGYNFDGCRLRVELA---HGGRGPSSNDRRGGYGGGGGSGGRFGISRHSEFRVIV 117

Query: 686 RGLPSSASWQDLKDHMRRAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDTEFKN 865
           RGLPSSASWQDLKDHMR+AGDVCFAEV RDSDG +G+VDYTN+EDMKYAIRKLDDTEF+N
Sbjct: 118 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRN 177

Query: 866 PWMRTRIRVKEFKGN 910
           PW R  IRVK+ + +
Sbjct: 178 PWARAYIRVKQHESS 192


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  283 bits (723), Expect = 1e-73
 Identities = 131/195 (67%), Positives = 154/195 (78%)
 Frame = +2

Query: 326 MSGRYSRMIYVGNLPADIREYEVEDLFYKYGRILDIELKIPPRPPCFCFVEFESSRDAED 505
           MSGR+SR IYVGNLP+DIRE E+EDLFYKYGRI+DIELK+PPRPPC+CFVEF+++RDAED
Sbjct: 1   MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAED 60

Query: 506 AIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSDYRVII 685
           AIRGRDGYNFDGCRLRVELA                                HS++RVI+
Sbjct: 61  AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIV 120

Query: 686 RGLPSSASWQDLKDHMRRAGDVCFAEVMRDSDGAYGLVDYTNYEDMKYAIRKLDDTEFKN 865
           RGLPSSASWQDLKDHMR+AGDVCFAEV RDS+G +G+VDYTNY+DMKYAIRKLDD EF+N
Sbjct: 121 RGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDAEFRN 180

Query: 866 PWMRTRIRVKEFKGN 910
           PW R  IRV++++ +
Sbjct: 181 PWARAYIRVRKYESS 195


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