BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007487
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   360   5e-97
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   357   2e-96
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   356   7e-96
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   347   4e-93
ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|2...   346   7e-93

>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  360 bits (923), Expect = 5e-97
 Identities = 181/308 (58%), Positives = 223/308 (72%), Gaps = 4/308 (1%)
 Frame = -2

Query: 1164 SIETNTNSPPNPLENYXXXXXXXXXXXSKDLELNRALTAXXXXXXXXXXKNDALFQDQWL 985
            S E  T + P+  ENY           SK+LEL RA+ A           ND +++D+WL
Sbjct: 42   SSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWL 101

Query: 984  IAVNKPQGVYCESLLSAVPTLL---THSGTQLNSPQLHLANRLDRDTSGVTIITKSHKVA 814
            IAVNKPQG+YCE++L+AVP LL    ++G + + P+LHLANRLDRDTSGV +ITKSHKVA
Sbjct: 102  IAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKVA 161

Query: 813  SKLVKAFTDHKIRKTYVAFCTGPAPQWKNITVRSGHGRSKFGAWRVYGVSDVGRVLPGGS 634
            SKLVKAFTDH + K+Y+AFC G +P+WK I V+SGHGRSKFG WRVY  +DVGR LPGGS
Sbjct: 162  SKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGS 221

Query: 633  FVRDMETSFEVLSINGQRCIQECPA-SXXXXXXXXXXXKSTIDCNSRRDEILVRAYPRSG 457
             VRDMET FEVLS+NG+  ++E                KS +D +S +DEIL+RA PRSG
Sbjct: 222  VVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSG 281

Query: 456  RTHQIRLHCQYLGIPIRGDVKYEGVYDFDGKRYEGHQLHAESLSFEHPMTAQPLLIQSPL 277
            RTHQIRLHCQYLGIPIRGDVKYEGV +++ K Y+ H+LHAESL F HP+T  PL +Q+PL
Sbjct: 282  RTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPL 341

Query: 276  PSWASYAV 253
            PSWAS A+
Sbjct: 342  PSWASQAL 349


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
            [Cucumis sativus]
          Length = 366

 Score =  357 bits (917), Expect = 2e-96
 Identities = 180/308 (58%), Positives = 222/308 (72%), Gaps = 4/308 (1%)
 Frame = -2

Query: 1164 SIETNTNSPPNPLENYXXXXXXXXXXXSKDLELNRALTAXXXXXXXXXXKNDALFQDQWL 985
            S E  T + P+  ENY           SK+LEL RA+ A           ND +++D+WL
Sbjct: 42   SSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEWL 101

Query: 984  IAVNKPQGVYCESLLSAVPTLL---THSGTQLNSPQLHLANRLDRDTSGVTIITKSHKVA 814
            IAVNKPQG+YCE++L+AVP LL    ++G + + P+LHLANRLDRDTSGV +ITKSHKVA
Sbjct: 102  IAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKVA 161

Query: 813  SKLVKAFTDHKIRKTYVAFCTGPAPQWKNITVRSGHGRSKFGAWRVYGVSDVGRVLPGGS 634
            SKLVKAFTDH + K+Y+AFC G +P+W  I V+SGHGRSKFG WRVY  +DVGR LPGGS
Sbjct: 162  SKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGGS 221

Query: 633  FVRDMETSFEVLSINGQRCIQECPA-SXXXXXXXXXXXKSTIDCNSRRDEILVRAYPRSG 457
             VRDMET FEVLS+NG+  ++E                KS +D +S +DEIL+RA PRSG
Sbjct: 222  VVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRSG 281

Query: 456  RTHQIRLHCQYLGIPIRGDVKYEGVYDFDGKRYEGHQLHAESLSFEHPMTAQPLLIQSPL 277
            RTHQIRLHCQYLGIPIRGDVKYEGV +++ K Y+ H+LHAESL F HP+T  PL +Q+PL
Sbjct: 282  RTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAPL 341

Query: 276  PSWASYAV 253
            PSWAS A+
Sbjct: 342  PSWASQAL 349


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  356 bits (913), Expect = 7e-96
 Identities = 176/311 (56%), Positives = 224/311 (72%), Gaps = 8/311 (2%)
 Frame = -2

Query: 1164 SIETNTNSPPNPLENYXXXXXXXXXXXSKDLELNRALTAXXXXXXXXXXKNDALFQDQWL 985
            +I   + + P  L+NY           SK +EL RAL+A          ++D L++DQWL
Sbjct: 7    NINPTSQNDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWL 66

Query: 984  IAVNKPQGVYCESLLSAVPTLLTHS--------GTQLNSPQLHLANRLDRDTSGVTIITK 829
            IAVNKPQGVYCE++L +VP +L  S        G + N  + HLANRLDRDTSGV +ITK
Sbjct: 67   IAVNKPQGVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITK 126

Query: 828  SHKVASKLVKAFTDHKIRKTYVAFCTGPAPQWKNITVRSGHGRSKFGAWRVYGVSDVGRV 649
            SHKVASKLVKAFTDHKI+KTY+A C G AP+W+ IT++SGHGRSKFG WRVY  SDVG+ 
Sbjct: 127  SHKVASKLVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQT 186

Query: 648  LPGGSFVRDMETSFEVLSINGQRCIQECPASXXXXXXXXXXXKSTIDCNSRRDEILVRAY 469
            LPGGS V+DMETSFE+LS+NGQ   +E               K+  + + ++ EILVRA+
Sbjct: 187  LPGGSTVKDMETSFELLSVNGQGSFKELSEFEKDENILVVEEKAAKNADVKKVEILVRAF 246

Query: 468  PRSGRTHQIRLHCQYLGIPIRGDVKYEGVYDFDGKRYEGHQLHAESLSFEHPMTAQPLLI 289
            P+SGRTHQIRLHCQYLGI IRGDVKYEGVY+++G+ Y+GH+LHAE+LSFEHP+T  P+++
Sbjct: 247  PQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVML 306

Query: 288  QSPLPSWASYA 256
            ++PLPSWA  A
Sbjct: 307  RAPLPSWAIQA 317


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  347 bits (889), Expect = 4e-93
 Identities = 173/304 (56%), Positives = 217/304 (71%), Gaps = 1/304 (0%)
 Frame = -2

Query: 1161 IETNTNSPPNPLENYXXXXXXXXXXXSKDLELNRALTAXXXXXXXXXXKNDALFQDQWLI 982
            I+ N+   P  L NY           SK +E +RA++A          ++D LF+DQWL+
Sbjct: 40   IDPNSKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLM 99

Query: 981  AVNKPQGVYCESLLSAVPTLLTHSGTQLNSPQLHLANRLDRDTSGVTIITKSHKVASKLV 802
            AVNKPQGVYCE++L +V  +L  S    +   LHLANRLDRDTSGV +ITKSH+VA+KL+
Sbjct: 100  AVNKPQGVYCETILLSVSRMLDDSDGHDSCRSLHLANRLDRDTSGVMVITKSHQVAAKLM 159

Query: 801  KAFTDHKIRKTYVAFCTGPAPQWKNITVRSGHGRSKFGAWRVYGVSDVGRVLPGGSFVRD 622
            KAF+D K+ KTY+A C G AP W+ IT++SGHGRSKFGAWRVY  SDVGR LP    ++D
Sbjct: 160  KAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKD 219

Query: 621  METSFEVLSINGQRCIQECPAS-XXXXXXXXXXXKSTIDCNSRRDEILVRAYPRSGRTHQ 445
            M TSFEVLS+NGQ  ++E P S            +S ID N+R+DEILVRA+PRSGRTHQ
Sbjct: 220  MVTSFEVLSVNGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRTHQ 279

Query: 444  IRLHCQYLGIPIRGDVKYEGVYDFDGKRYEGHQLHAESLSFEHPMTAQPLLIQSPLPSWA 265
            IRLHCQYLGI IRGDVKYEGV+++ GK Y+GH+LHAESLSFEHP+T   +  ++PLPSWA
Sbjct: 280  IRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWA 339

Query: 264  SYAV 253
              A+
Sbjct: 340  VQAL 343


>ref|XP_002318955.1| predicted protein [Populus trichocarpa] gi|222857331|gb|EEE94878.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  346 bits (887), Expect = 7e-93
 Identities = 168/251 (66%), Positives = 199/251 (79%)
 Frame = -2

Query: 1014 NDALFQDQWLIAVNKPQGVYCESLLSAVPTLLTHSGTQLNSPQLHLANRLDRDTSGVTII 835
            +D L+QDQWLIAVNKPQGVYCE++L +VP             QLHLANRLDRDTSGV +I
Sbjct: 15   SDVLYQDQWLIAVNKPQGVYCETVLDSVP-------------QLHLANRLDRDTSGVMVI 61

Query: 834  TKSHKVASKLVKAFTDHKIRKTYVAFCTGPAPQWKNITVRSGHGRSKFGAWRVYGVSDVG 655
            TK HKVASKLVKAFTDHK+RKTY+A C G AP+W+ IT++SGHGRSKFGA+RVY  SDVG
Sbjct: 62   TKLHKVASKLVKAFTDHKVRKTYIALCIGSAPKWEKITIKSGHGRSKFGAFRVYAASDVG 121

Query: 654  RVLPGGSFVRDMETSFEVLSINGQRCIQECPASXXXXXXXXXXXKSTIDCNSRRDEILVR 475
            R LPGGS V+DMETSFEVLSINGQ   +E               K+ ID ++++DEILVR
Sbjct: 122  RSLPGGSTVKDMETSFEVLSINGQGSFREPSEFNSDKNILVVEEKAVIDTDAKKDEILVR 181

Query: 474  AYPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYDFDGKRYEGHQLHAESLSFEHPMTAQPL 295
            A+PRSGRTHQIRLHCQYLGIPIRGDVKYEGV ++ G+ Y+GH+LHAESLS EHP+T QPL
Sbjct: 182  AFPRSGRTHQIRLHCQYLGIPIRGDVKYEGVCEWKGRTYDGHELHAESLSLEHPVTGQPL 241

Query: 294  LIQSPLPSWAS 262
            + ++PLP WA+
Sbjct: 242  MFRAPLPVWAT 252