BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007450
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   110   4e-39
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              110   4e-39
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...   110   4e-37
ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. l...   109   2e-36
ref|NP_001078212.1| pentatricopeptide repeat-containing protein ...   109   3e-36

>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  110 bits (275), Expect(2) = 4e-39
 Identities = 50/72 (69%), Positives = 60/72 (83%)
 Frame = +3

Query: 210 LKPNRSAFPCTIKACASLSDLNSGKQTHQQALIFGYEDDIFVSSALIDMYSKCGSLDDAR 389
           LKPNRS FPC IK+C++L DL+SG+Q HQQALIFG+E D+FVSSAL+DMYSKCG L DAR
Sbjct: 148 LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 207

Query: 390 MVFDEIPQRGFL 425
            +FDEI  R  +
Sbjct: 208 TLFDEISHRNIV 219



 Score = 76.3 bits (186), Expect(2) = 4e-39
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +1

Query: 70  NPNLLSLFNKYVDQTNVFSWNSIISDFARNGESIAALSAFSSMRKL 207
           NPNL +LFNKYVD+TNVFSWNS+I++ AR+G+S+ AL AFSSMRKL
Sbjct: 101 NPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL 146


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  110 bits (275), Expect(2) = 4e-39
 Identities = 50/72 (69%), Positives = 60/72 (83%)
 Frame = +3

Query: 210 LKPNRSAFPCTIKACASLSDLNSGKQTHQQALIFGYEDDIFVSSALIDMYSKCGSLDDAR 389
           LKPNRS FPC IK+C++L DL+SG+Q HQQALIFG+E D+FVSSAL+DMYSKCG L DAR
Sbjct: 72  LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 131

Query: 390 MVFDEIPQRGFL 425
            +FDEI  R  +
Sbjct: 132 TLFDEISHRNIV 143



 Score = 76.3 bits (186), Expect(2) = 4e-39
 Identities = 34/46 (73%), Positives = 42/46 (91%)
 Frame = +1

Query: 70  NPNLLSLFNKYVDQTNVFSWNSIISDFARNGESIAALSAFSSMRKL 207
           NPNL +LFNKYVD+TNVFSWNS+I++ AR+G+S+ AL AFSSMRKL
Sbjct: 25  NPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL 70


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  110 bits (275), Expect(2) = 4e-37
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +3

Query: 210 LKPNRSAFPCTIKACASLSDLNSGKQTHQQALIFGYEDDIFVSSALIDMYSKCGSLDDAR 389
           L PNRS FPCTIK+C+SL DL +GKQ HQQA +FGY  DIFV+SALIDMYSKCG L+DAR
Sbjct: 82  LHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR 141

Query: 390 MVFDEIPQR 416
            +FDEIP+R
Sbjct: 142 KLFDEIPER 150



 Score = 69.3 bits (168), Expect(2) = 4e-37
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = +1

Query: 76  NLLSLFNKYVDQTNVFSWNSIISDFARNGESIAALSAFSSMRKL 207
           NL S+F KYVD+T+V+SWNSII+DFAR+G+S+ AL AFSSMRKL
Sbjct: 37  NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKL 80


>ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 659

 Score =  109 bits (272), Expect(2) = 2e-36
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +3

Query: 210 LKPNRSAFPCTIKACASLSDLNSGKQTHQQALIFGYEDDIFVSSALIDMYSKCGSLDDAR 389
           L P RS+FPC IKAC+SL D+ SGKQTHQQA +FGY+ DIFVSSALI MYS CG L+DAR
Sbjct: 72  LYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131

Query: 390 MVFDEIPQRGFL 425
            VFDEIP+R  +
Sbjct: 132 KVFDEIPKRNIV 143



 Score = 68.2 bits (165), Expect(2) = 2e-36
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = +1

Query: 76  NLLSLFNKYVDQTNVFSWNSIISDFARNGESIAALSAFSSMRKL 207
           NL +LFN+YVD+T+VFSWNS+I+D AR+G+S  AL AFSSMRKL
Sbjct: 27  NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKL 70


>ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
           gi|9279668|dbj|BAB01225.1| selenium-binding protein-like
           [Arabidopsis thaliana] gi|332643694|gb|AEE77215.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  109 bits (272), Expect(2) = 3e-36
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = +3

Query: 210 LKPNRSAFPCTIKACASLSDLNSGKQTHQQALIFGYEDDIFVSSALIDMYSKCGSLDDAR 389
           L P RS+FPC IKAC+SL D+ SGKQTHQQA +FGY+ DIFVSSALI MYS CG L+DAR
Sbjct: 72  LYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131

Query: 390 MVFDEIPQRGFL 425
            VFDEIP+R  +
Sbjct: 132 KVFDEIPKRNIV 143



 Score = 67.8 bits (164), Expect(2) = 3e-36
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = +1

Query: 76  NLLSLFNKYVDQTNVFSWNSIISDFARNGESIAALSAFSSMRKL 207
           NL +LFN+YVD+T+VFSWNS+I+D AR+G+S  AL AFSSMRKL
Sbjct: 27  NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL 70