BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007438
         (1747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) syntha...   597   e-168
ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Rici...   578   e-162
ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-li...   577   e-162
gb|EAZ02340.1| hypothetical protein OsI_24443 [Oryza sativa Indi...   565   e-158
ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis tha...   564   e-158

>ref|XP_004151862.1| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
            [Cucumis sativus] gi|449484028|ref|XP_004156763.1|
            PREDICTED: tRNA-dihydrouridine(16/17) synthase
            [NAD(P)(+)]-like [Cucumis sativus]
          Length = 426

 Score =  597 bits (1538), Expect = e-168
 Identities = 280/335 (83%), Positives = 317/335 (94%), Gaps = 1/335 (0%)
 Frame = +1

Query: 193  SQIERAWAHWNKLGRPKLIVAPMVDNSELPFRMLCRKFGAEAAYTPMLHSRIFTESDKYR 372
            S+IERAWAHW KLGRPKLIVAPMVDNSELPFR+LCRK+GAEAAYTPMLHSRIFTE++KYR
Sbjct: 81   SRIERAWAHWTKLGRPKLIVAPMVDNSELPFRLLCRKYGAEAAYTPMLHSRIFTENEKYR 140

Query: 373  AEEFTTCQEDRPLFVQFCANDPDILLEAAKRVEPYCDYVDINFGCPQRIARRGYYGAFLM 552
              EFTTCQEDRPLFVQFCANDPD+LLEAA+RVEPYCDYVD+N GCPQRIARRG YGAFLM
Sbjct: 141  NMEFTTCQEDRPLFVQFCANDPDVLLEAARRVEPYCDYVDLNLGCPQRIARRGNYGAFLM 200

Query: 553  DNLPLVKSLVEKLSSNLKVPVSCKIRIFPDLQKTIDYAKMLEEAGCALLAVHGRTRDEKD 732
            DNLPLVK++VEKL+SNL+VPVSCKIRIFP+LQ TI+YA+MLE+AGC+LLAVHGRTRDEKD
Sbjct: 201  DNLPLVKAIVEKLASNLQVPVSCKIRIFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKD 260

Query: 733  GKKFRANWDAIKAVKNAVRIPVLANGNIRHMDDVHECLKETGVEGVLSAETLLDNPALFA 912
            GKKFRANW AI AVKNAVRIPVLANGNIRHM+DV++CL+ETGVEGVLSAETLL+NPALFA
Sbjct: 261  GKKFRANWSAISAVKNAVRIPVLANGNIRHMEDVNDCLQETGVEGVLSAETLLENPALFA 320

Query: 913  GYCTSEWV-SDEDNKEAGNLDQADLVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPS 1089
            G+ T+EW+   E+N   GNLDQADL+V+YLKLCEKYPVPWRMIRSHVHK+LG+WF+IHP 
Sbjct: 321  GFRTAEWIEGHEENTRDGNLDQADLLVDYLKLCEKYPVPWRMIRSHVHKLLGDWFKIHPH 380

Query: 1090 VREDLNAQSKLTFEFLYDIVKRLRELDVKMPLFVK 1194
            +RED NAQSKLTFEFLY++V+RLREL VKMPL++K
Sbjct: 381  IREDFNAQSKLTFEFLYNMVERLRELQVKMPLYIK 415


>ref|XP_002533266.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
            gi|223526922|gb|EEF29128.1| tRNA-dihydrouridine synthase,
            putative [Ricinus communis]
          Length = 426

 Score =  578 bits (1490), Expect = e-162
 Identities = 276/352 (78%), Positives = 318/352 (90%), Gaps = 1/352 (0%)
 Frame = +1

Query: 184  NLSSQIERAWAHWNKLGRPKLIVAPMVDNSELPFRMLCRKFGAEAAYTPMLHSRIFTESD 363
            N  S+++RAWAHWNK+G+PKL+VAPMVDNSELPFRMLCRK+GA+AAYTPMLHSRIFTE++
Sbjct: 73   NGESRVDRAWAHWNKIGKPKLLVAPMVDNSELPFRMLCRKYGADAAYTPMLHSRIFTENE 132

Query: 364  KYRAEEFTTCQEDRPLFVQFCANDPDILLEAAKRVEPYCDYVDINFGCPQRIARRGYYGA 543
            KYR +EFTTC EDRPLFVQFCANDPDILLEAA++VEPYCDYVDIN GCPQRIARRG YGA
Sbjct: 133  KYRTQEFTTCNEDRPLFVQFCANDPDILLEAARKVEPYCDYVDINLGCPQRIARRGNYGA 192

Query: 544  FLMDNLPLVKSLVEKLSSNLKVPVSCKIRIFPDLQKTIDYAKMLEEAGCALLAVHGRTRD 723
            FLMDNLPLVKSLVEKL+ NL VPVSCKIR+FP L  TI YA+MLEEAGC+LLAVHGRTRD
Sbjct: 193  FLMDNLPLVKSLVEKLALNLNVPVSCKIRLFPKLDDTISYARMLEEAGCSLLAVHGRTRD 252

Query: 724  EKDGKKFRANWDAIKAVKNAVRIPVLANGNIRHMDDVHECLKETGVEGVLSAETLLDNPA 903
            EKDGKKFRA+W AIKAV+NAV+IP+LANGN+RHMDDV  CL+ETG +GVLSAE+LL+NPA
Sbjct: 253  EKDGKKFRADWKAIKAVRNAVKIPLLANGNVRHMDDVRNCLEETGADGVLSAESLLENPA 312

Query: 904  LFAGYCTSEW-VSDEDNKEAGNLDQADLVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRI 1080
            LFAG+ T+EW V DE++   G LDQADL+VEYLKLCE+YPVPWRMIR+HVHKMLG+WFRI
Sbjct: 313  LFAGFRTAEWVVGDEESTRDGKLDQADLLVEYLKLCEEYPVPWRMIRAHVHKMLGDWFRI 372

Query: 1081 HPSVREDLNAQSKLTFEFLYDIVKRLRELDVKMPLFVKKTSQDRSLTNGVAA 1236
            HP VRE+LNAQS+LTFEFLY++V +LR L V++PL+VK    D S T GVAA
Sbjct: 373  HPHVREELNAQSRLTFEFLYNVVDQLRALGVRIPLYVK--DLDTSAT-GVAA 421


>ref|XP_002283225.1| PREDICTED: tRNA-dihydrouridine synthase 1-like [Vitis vinifera]
          Length = 424

 Score =  577 bits (1488), Expect = e-162
 Identities = 275/348 (79%), Positives = 319/348 (91%), Gaps = 1/348 (0%)
 Frame = +1

Query: 193  SQIERAWAHWNKLGRPKLIVAPMVDNSELPFRMLCRKFGAEAAYTPMLHSRIFTESDKYR 372
            S+IERAWAHW KLG+PKLIVAPMVDNSELPFRMLCRK+GA+AAYTPMLHSRIF+E++KYR
Sbjct: 77   SRIERAWAHWKKLGQPKLIVAPMVDNSELPFRMLCRKYGAQAAYTPMLHSRIFSENEKYR 136

Query: 373  AEEFTTCQEDRPLFVQFCANDPDILLEAAKRVEPYCDYVDINFGCPQRIARRGYYGAFLM 552
            ++EFTTC+EDRPLFVQFCANDPD LLEAA+RVEPYCDYVDIN GCPQRIARRG YGAFLM
Sbjct: 137  SQEFTTCKEDRPLFVQFCANDPDTLLEAAQRVEPYCDYVDINLGCPQRIARRGNYGAFLM 196

Query: 553  DNLPLVKSLVEKLSSNLKVPVSCKIRIFPDLQKTIDYAKMLEEAGCALLAVHGRTRDEKD 732
            DNLPLVKSLVEKL+ NL VPVSCKIR+FP+LQ TI+YA+MLE+AGC+LLAVHGRTRDEKD
Sbjct: 197  DNLPLVKSLVEKLALNLHVPVSCKIRVFPNLQDTINYARMLEDAGCSLLAVHGRTRDEKD 256

Query: 733  GKKFRANWDAIKAVKNAVRIPVLANGNIRHMDDVHECLKETGVEGVLSAETLLDNPALFA 912
            GKKFRA+W+AIKAVKNAV IPVLANG+IRHMDDV  CL+ETG +GVLSAE+LL+NPALFA
Sbjct: 257  GKKFRADWNAIKAVKNAVSIPVLANGDIRHMDDVQRCLEETGADGVLSAESLLENPALFA 316

Query: 913  GYCTSEW-VSDEDNKEAGNLDQADLVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPS 1089
            G+ T+EW +  E+  + G LDQA+L+VEYLKLCEKYPVPWRMIRSHVHK+LGEWFRI P 
Sbjct: 317  GFQTAEWALGGEEGNKDGELDQANLLVEYLKLCEKYPVPWRMIRSHVHKLLGEWFRIQPQ 376

Query: 1090 VREDLNAQSKLTFEFLYDIVKRLRELDVKMPLFVKKTSQDRSLTNGVA 1233
            VR+DLN+QSKLTFEFLY++V +LREL V++PL+ K T   R+ +NG+A
Sbjct: 377  VRDDLNSQSKLTFEFLYNMVDQLRELGVRIPLYTKDTPAGRT-SNGIA 423


>gb|EAZ02340.1| hypothetical protein OsI_24443 [Oryza sativa Indica Group]
          Length = 396

 Score =  565 bits (1456), Expect = e-158
 Identities = 264/347 (76%), Positives = 313/347 (90%)
 Frame = +1

Query: 196  QIERAWAHWNKLGRPKLIVAPMVDNSELPFRMLCRKFGAEAAYTPMLHSRIFTESDKYRA 375
            ++ERAWAHW +LG PK++VAPMVDNSELPFRMLCR++GA  AYTPMLHSRIF+E++K+RA
Sbjct: 48   RVERAWAHWRRLGSPKMVVAPMVDNSELPFRMLCRRYGATGAYTPMLHSRIFSENEKHRA 107

Query: 376  EEFTTCQEDRPLFVQFCANDPDILLEAAKRVEPYCDYVDINFGCPQRIARRGYYGAFLMD 555
             EFTTC+EDRPLFVQFCANDPDILL+AAK VEPYCDYVDINFGCPQRIARRGYYGAFLMD
Sbjct: 108  MEFTTCKEDRPLFVQFCANDPDILLQAAKIVEPYCDYVDINFGCPQRIARRGYYGAFLMD 167

Query: 556  NLPLVKSLVEKLSSNLKVPVSCKIRIFPDLQKTIDYAKMLEEAGCALLAVHGRTRDEKDG 735
            NLPL+KSLV+ LS+NL VPVSCKIRIFP L+ T+ YAKMLEEAG +L+AVHGRTRDEKDG
Sbjct: 168  NLPLIKSLVQNLSANLHVPVSCKIRIFPRLEDTLAYAKMLEEAGASLVAVHGRTRDEKDG 227

Query: 736  KKFRANWDAIKAVKNAVRIPVLANGNIRHMDDVHECLKETGVEGVLSAETLLDNPALFAG 915
            KKFRA+WDAIKAVK+A+RIPVLANGNIRH+DDV +CL+ TG +GVLSAETLL+NPALFAG
Sbjct: 228  KKFRADWDAIKAVKDALRIPVLANGNIRHLDDVKDCLEHTGADGVLSAETLLENPALFAG 287

Query: 916  YCTSEWVSDEDNKEAGNLDQADLVVEYLKLCEKYPVPWRMIRSHVHKMLGEWFRIHPSVR 1095
            + T EW  + D  EA  LDQADLV+EYLKLCE+YPVPWRM+RSHVHKMLG+WFR+HP VR
Sbjct: 288  FRTKEWKENGDEDEASGLDQADLVIEYLKLCEQYPVPWRMVRSHVHKMLGDWFRVHPQVR 347

Query: 1096 EDLNAQSKLTFEFLYDIVKRLRELDVKMPLFVKKTSQDRSLTNGVAA 1236
            E+LNAQSKLTFE+L+D+VKRL++L   +PL+ +  +  ++ +NG+AA
Sbjct: 348  EELNAQSKLTFEWLHDMVKRLKDLGGGIPLY-RNNNALQTTSNGLAA 393


>ref|NP_201523.1| tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
            gi|10177609|dbj|BAB10956.1| unnamed protein product
            [Arabidopsis thaliana] gi|15146316|gb|AAK83641.1|
            AT5g67220/K21H1_18 [Arabidopsis thaliana]
            gi|20908082|gb|AAM26724.1| AT5g67220/K21H1_18
            [Arabidopsis thaliana] gi|332010932|gb|AED98315.1|
            tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana]
          Length = 423

 Score =  564 bits (1453), Expect = e-158
 Identities = 271/353 (76%), Positives = 309/353 (87%), Gaps = 7/353 (1%)
 Frame = +1

Query: 160  TSPQDVGH-----NLSSQIERAWAHWNKLGRPKLIVAPMVDNSELPFRMLCRKFGAEAAY 324
            T+P  +G      ++ +++ERAWAHW KLGRPK IVAPMVDNSELPFR+LC+K+GA+AAY
Sbjct: 57   TAPASLGSPSRVLSIDTRVERAWAHWKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAY 116

Query: 325  TPMLHSRIFTESDKYRAEEFTTCQEDRPLFVQFCANDPDILLEAAKRVEPYCDYVDINFG 504
            TPMLHSRIFTE++KYR +EFTTC+EDRPLFVQFCANDPD LLEAAKRVEPYCDYVDIN G
Sbjct: 117  TPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQFCANDPDTLLEAAKRVEPYCDYVDINLG 176

Query: 505  CPQRIARRGYYGAFLMDNLPLVKSLVEKLSSNLKVPVSCKIRIFPDLQKTIDYAKMLEEA 684
            CPQRIARRG YGAFLMDNLPLVKSLVEKL+ NL VPVSCKIRIFP+L+ T+ YAKMLE+A
Sbjct: 177  CPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDA 236

Query: 685  GCALLAVHGRTRDEKDGKKFRANWDAIKAVKNAVRIPVLANGNIRHMDDVHECLKETGVE 864
            GC+LLAVHGRTRDEKDGKKFRA+W AIK VKNA+RIPVLANGN+R ++DV  C+KETGVE
Sbjct: 237  GCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVE 296

Query: 865  GVLSAETLLDNPALFAGYCTSEWVSD--EDNKEAGNLDQADLVVEYLKLCEKYPVPWRMI 1038
            GVLSAETLL+NPA FAG+ T+EW  D  E+    G LDQ DLVVEYLKLCEK+PVPWRMI
Sbjct: 297  GVLSAETLLENPAAFAGFRTAEWAKDNEEEGFVDGGLDQGDLVVEYLKLCEKHPVPWRMI 356

Query: 1039 RSHVHKMLGEWFRIHPSVREDLNAQSKLTFEFLYDIVKRLRELDVKMPLFVKK 1197
            RSHVHKMLGEWFRIHP VRE LNAQ+ LTFEFLY +V +LREL  ++PL+ KK
Sbjct: 357  RSHVHKMLGEWFRIHPQVREQLNAQNILTFEFLYGLVDQLRELGGRVPLYKKK 409