BLASTX nr result

ID: Lithospermum22_contig00007428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007428
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275610.1| PREDICTED: dof zinc finger protein DOF4.6-li...    70   4e-10
ref|XP_002301420.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07

>ref|XP_002275610.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 287

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 66/213 (30%), Positives = 84/213 (39%), Gaps = 22/213 (10%)
 Frame = -3

Query: 575 KPIIPD----LSMPSFSRLPHQNPKITHHGSSQDLNLAYPPMXXXXXXXXXXXXXLQPNP 408
           K ++PD     + P F     QNPKI H G  QDLNLA+PP              L  N 
Sbjct: 104 KKLLPDHLITSTPPGFPSSASQNPKI-HEG--QDLNLAFPPPPEDYNNSISEFADLSYNG 160

Query: 407 NNMDFLKNEIPSSKGLHTFXXXXXXXXXXXXXXSG------------------GIPLHAF 282
           ++   L+N  PSS   H                 G                  G PL  F
Sbjct: 161 DSKPHLQNPTPSSSSSHHHLSAMELLKSTGIASRGLGSFMPMSVSDSNSIYSSGFPLQEF 220

Query: 281 KPNLNFSLDGFDNXXXXXXXXXXXXXXXXXXXXXXXXNHQNVFGSNLSSGAQDTNEKIFL 102
           KP LNFSLDGF                            Q+ +GS    G Q++  ++  
Sbjct: 221 KPTLNFSLDGF----------------------------QSGYGS--LQGVQESGARLLF 250

Query: 101 PPSPLDDLKQVSSTTQFEQHRGQGGQDTNNGGY 3
              PL+DLKQVS+TT+FEQ RG  G   ++ GY
Sbjct: 251 ---PLEDLKQVSNTTEFEQSRGVQG---DSAGY 277


>ref|XP_002301420.1| predicted protein [Populus trichocarpa] gi|222843146|gb|EEE80693.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 55/188 (29%), Positives = 81/188 (43%)
 Frame = -3

Query: 566 IPDLSMPSFSRLPHQNPKITHHGSSQDLNLAYPPMXXXXXXXXXXXXXLQPNPNNMDFLK 387
           +PDL+ P+ S    QNPK  H G  QDLNLA+P M                +   ++ L+
Sbjct: 90  LPDLNPPNLSHFSSQNPKSAHEG--QDLNLAFPAM---------------QDSQALELLR 132

Query: 386 NEIPSSKGLHTFXXXXXXXXXXXXXXSGGIPLHAFKPNLNFSLDGFDNXXXXXXXXXXXX 207
           + I +S+GL++F              SGG PL   KP L+FSLDG  +            
Sbjct: 133 SGI-ASRGLNSF-IPTPMPDSNTLYSSGGFPLQELKPTLSFSLDGLGSRY---------- 180

Query: 206 XXXXXXXXXXXXNHQNVFGSNLSSGAQDTNEKIFLPPSPLDDLKQVSSTTQFEQHRGQGG 27
                                   G Q+ N ++     P  +LKQ+SST + +Q++GQG 
Sbjct: 181 ------------------------GVQEHNGRLLF---PFGELKQLSSTNEVDQNKGQG- 212

Query: 26  QDTNNGGY 3
             T++ GY
Sbjct: 213 --TSSTGY 218


>ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|222860981|gb|EEE98523.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 55/197 (27%), Positives = 75/197 (38%), Gaps = 17/197 (8%)
 Frame = -3

Query: 566 IPDLSMPSFSRLPHQNPKITHHGSSQDLNLAYPPMXXXXXXXXXXXXXLQPNPNNMDFLK 387
           +PDL+ PS S    QNPK TH G  QDLNLA+P M                N NN     
Sbjct: 91  LPDLNPPSLSHFSSQNPKSTHEG--QDLNLAFPAMQDSQGISHYTEVPKTENRNNNQHNS 148

Query: 386 NEIP----------------SSKGLHTFXXXXXXXXXXXXXXSGGIPLHAFKPNLNFSLD 255
           +  P                +S+GL+TF              SGG PL   +P L+F  D
Sbjct: 149 SSSPYTSSPISAMELLRSGFASRGLNTF-IPTPMPDSNTLYSSGGFPLQELRPTLSFPAD 207

Query: 254 GFDNXXXXXXXXXXXXXXXXXXXXXXXXNHQNVFGSNLSSGAQDTNEKIFLPPSPLDDLK 75
           G  +                                    G Q+ + ++     P  +LK
Sbjct: 208 GLGSRY----------------------------------GIQENSGRLLF---PFGELK 230

Query: 74  QVSSTT-QFEQHRGQGG 27
           Q+SSTT + +Q++GQGG
Sbjct: 231 QLSSTTSEVDQNKGQGG 247


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