BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007412
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]     370   e-100
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   365   1e-98
ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|2...   357   2e-96
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   356   6e-96
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              354   2e-95

>emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
          Length = 253

 Score =  370 bits (950), Expect = e-100
 Identities = 182/243 (74%), Positives = 205/243 (84%), Gaps = 4/243 (1%)
 Frame = -3

Query: 880 NPGP---DTSPNMTIYIXXXXXXXXXXXXXKSLQAVFSQFGKILDVLAFKTLKHKGQAWV 710
           NP P   +T PN+TIYI             KS+ AVFSQFGKIL+VLAFKTLKHKGQAWV
Sbjct: 11  NPAPSGGETPPNVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWV 70

Query: 709 VFEDVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFAPREKRKRHDEKGRKK 530
           VFE+VSSASNALRQMQGFPFYDKPMRIQYAKTKSDV+AKADGTF PREKRKRH++KGRKK
Sbjct: 71  VFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKGRKK 130

Query: 529 KEHHDASQAAMGINPQYGAAYGTTPPLSQLPFGGGAKSAVPEVPAPPNSILFIQNLPHQT 350
           K+  D++QA MG+NP Y  AYG  PP SQ+P+ GGAK+AVPE PAPPNSILF+QNLPHQ+
Sbjct: 131 KDQQDSNQAGMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQS 190

Query: 349 NSMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMHALQGFGIN-ESPMMITY 173
             MMLQMLFCQYPGFKEVRM+EAKPGIAF+EY +E+QSTVAM ALQGF I  E+PM+ITY
Sbjct: 191 TPMMLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITY 250

Query: 172 AKK 164
           AKK
Sbjct: 251 AKK 253


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  365 bits (936), Expect = 1e-98
 Identities = 181/241 (75%), Positives = 204/241 (84%), Gaps = 2/241 (0%)
 Frame = -3

Query: 880 NPGPDTSPNMTIYIXXXXXXXXXXXXXKSLQAVFSQFGKILDVLAFKTLKHKGQAWVVFE 701
           N G + SPNMTIYI             KSL AVFSQFGKI++VLAFKTLKHKGQAWVVFE
Sbjct: 5   NTGGEISPNMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFE 64

Query: 700 DVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFAPREKRKRHDEK-GRKKKE 524
           +VSSA+NALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTF PRE+R+RHD++ GRK++E
Sbjct: 65  EVSSATNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRRE 124

Query: 523 HHDASQAAMGINPQYGAAYGTTPPLSQLPFGGGAKSAVPEVPAPPNSILFIQNLPHQTNS 344
            HDA+QA +G+NP YG AYG  PPLSQ+P+ GGAKSAVPE PAPPN+ILFIQNLPH+   
Sbjct: 125 QHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATP 184

Query: 343 MMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMHALQGFGIN-ESPMMITYAK 167
           MMLQM FCQYPGFKEVRMVEAKPGIAFVEY +E+QSTVAM  LQG  IN ++PM+ITYAK
Sbjct: 185 MMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAK 244

Query: 166 K 164
           K
Sbjct: 245 K 245


>ref|XP_002302719.1| predicted protein [Populus trichocarpa] gi|222844445|gb|EEE81992.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  357 bits (917), Expect = 2e-96
 Identities = 172/240 (71%), Positives = 200/240 (83%)
 Frame = -3

Query: 883 ANPGPDTSPNMTIYIXXXXXXXXXXXXXKSLQAVFSQFGKILDVLAFKTLKHKGQAWVVF 704
           ++ G + S NMTIYI             K+L AVFSQFGKIL++LAFKTLKHKGQAWVVF
Sbjct: 12  SSTGTEVSSNMTIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVF 71

Query: 703 EDVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFAPREKRKRHDEKGRKKKE 524
           EDV SASNA+RQMQ FPFYDKPMRIQYAKTKSD++AKADGTF PREKR+RH+EKG+KKK+
Sbjct: 72  EDVQSASNAMRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKKD 131

Query: 523 HHDASQAAMGINPQYGAAYGTTPPLSQLPFGGGAKSAVPEVPAPPNSILFIQNLPHQTNS 344
            HD +Q  +G+ P YG AYGTTPPLSQ+P+ GG KS VPE PAPPN+ILFIQNLP++T +
Sbjct: 132 QHDTNQVGVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTT 191

Query: 343 MMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMHALQGFGINESPMMITYAKK 164
           MMLQMLF QY GFKEVRMVE KPGIAFVEY +E+QSTVAMHALQGF + ++ M+ITYAKK
Sbjct: 192 MMLQMLFQQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKLQQNSMLITYAKK 251


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  356 bits (913), Expect = 6e-96
 Identities = 180/245 (73%), Positives = 201/245 (82%), Gaps = 1/245 (0%)
 Frame = -3

Query: 895 MEEVANPGPDTSPNMTIYIXXXXXXXXXXXXXKSLQAVFSQFGKILDVLAFKTLKHKGQA 716
           M EV   G +  PNMTIYI             KSL AVFSQFGKIL+VLAFKTLKHKGQA
Sbjct: 1   MAEVTTTGNEVPPNMTIYINNLNEKIKLEELKKSLNAVFSQFGKILEVLAFKTLKHKGQA 60

Query: 715 WVVFEDVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFAPREKRKRHDEKGR 536
           WVVFE+VSSA+NALRQMQGFPFYDKPMRIQYAKTKSD+IAK+DG+F PREKRKRH+EKGR
Sbjct: 61  WVVFEEVSSATNALRQMQGFPFYDKPMRIQYAKTKSDIIAKSDGSFVPREKRKRHEEKGR 120

Query: 535 KKKEHHDASQAAMGINPQYGAAYGTTPPLSQLPFGGGAKSAVPEVPAPPNSILFIQNLPH 356
           KKKE HDA+QA MG+NP +  AYG T   SQ+P+ GG    VPE PAPPNSILF+QNLPH
Sbjct: 121 KKKEQHDANQAGMGLNPAFAGAYGATAH-SQVPYSGGV--MVPEAPAPPNSILFVQNLPH 177

Query: 355 QTNSMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMHALQGFGIN-ESPMMI 179
           +T  MMLQMLFCQYPGFKEVRMVEAKPGIAFVEY +E+QSTVAM ALQGF +N ++ M+I
Sbjct: 178 ETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLI 237

Query: 178 TYAKK 164
           TYAKK
Sbjct: 238 TYAKK 242


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  354 bits (909), Expect = 2e-95
 Identities = 176/232 (75%), Positives = 198/232 (85%), Gaps = 2/232 (0%)
 Frame = -3

Query: 853 MTIYIXXXXXXXXXXXXXKSLQAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVSSASNAL 674
           MTIYI             KSL AVFSQFGKI++VLAFKTLKHKGQAWVVFE+VSSA+NAL
Sbjct: 1   MTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNAL 60

Query: 673 RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFAPREKRKRHDEK-GRKKKEHHDASQAAM 497
           RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTF PRE+R+RHD++ GRK++E HDA+QA +
Sbjct: 61  RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRREQHDANQAGV 120

Query: 496 GINPQYGAAYGTTPPLSQLPFGGGAKSAVPEVPAPPNSILFIQNLPHQTNSMMLQMLFCQ 317
           G+NP YG AYG  PPLSQ+P+ GGAKSAVPE PAPPN+ILFIQNLPH+   MMLQM FCQ
Sbjct: 121 GVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQ 180

Query: 316 YPGFKEVRMVEAKPGIAFVEYENEIQSTVAMHALQGFGIN-ESPMMITYAKK 164
           YPGFKEVRMVEAKPGIAFVEY +E+QSTVAM  LQG  IN ++PM+ITYAKK
Sbjct: 181 YPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232