BLASTX nr result

ID: Lithospermum22_contig00007310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007310
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...    65   6e-09
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ...    64   1e-08
ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|1...    62   4e-08
ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]            61   8e-08

>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 174

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -2

Query: 244 GIKGMDGQFLDGWVIFAEYARPRQFPPPLENNRNTPYGRQ 125
           GI+GMDG+FLDGWVIFAEYARPR  PPP  NN   PYGR+
Sbjct: 136 GIEGMDGKFLDGWVIFAEYARPR--PPPENNNGFAPYGRR 173


>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|147854770|emb|CAN78606.1| hypothetical protein
           VITISV_024164 [Vitis vinifera]
           gi|302143178|emb|CBI20473.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = -2

Query: 244 GIKGMDGQFLDGWVIFAEYARPRQFPPPLENNRNTPYGR 128
           GIKGMDG+FLDGWVIFAEYARPR  PP  +NN   PYGR
Sbjct: 98  GIKGMDGKFLDGWVIFAEYARPRP-PPSPQNNGAPPYGR 135


>ref|XP_002319264.1| predicted protein [Populus trichocarpa] gi|118487492|gb|ABK95573.1|
           unknown [Populus trichocarpa]
           gi|222857640|gb|EEE95187.1| predicted protein [Populus
           trichocarpa]
          Length = 149

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = -2

Query: 244 GIKGMDGQFLDGWVIFAEYARPRQFPPPLENNRNTPYG 131
           GIKGMDGQFLDGWVIFAEYARP+Q P   +NN    YG
Sbjct: 111 GIKGMDGQFLDGWVIFAEYARPKQPPSQPQNNMGPGYG 148


>ref|XP_002316957.1| predicted protein [Populus trichocarpa] gi|222860022|gb|EEE97569.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/45 (71%), Positives = 33/45 (73%)
 Frame = -2

Query: 244 GIKGMDGQFLDGWVIFAEYARPRQFPPPLENNRNTPYGRQ*LLWQ 110
           GIKGMDGQFLDGWVIFAEYARPRQ  PP E   NT  G    LW+
Sbjct: 112 GIKGMDGQFLDGWVIFAEYARPRQ--PPSEPQNNTGMG----LWK 150


>ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
          Length = 145

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/40 (70%), Positives = 31/40 (77%)
 Frame = -2

Query: 244 GIKGMDGQFLDGWVIFAEYARPRQFPPPLENNRNTPYGRQ 125
           GI+GMDG+FLDGWVIFAEYARPR  P    NN +  YGRQ
Sbjct: 106 GIEGMDGKFLDGWVIFAEYARPRPPPGQSLNNNSPQYGRQ 145


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