BLASTX nr result

ID: Lithospermum22_contig00007271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007271
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326259.1| predicted protein [Populus trichocarpa] gi|2...   158   3e-36
gb|ABK93931.1| unknown [Populus trichocarpa]                          158   3e-36
sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   157   8e-36
gb|AFK44729.1| unknown [Lotus japonicus]                              154   7e-35
ref|XP_003538348.1| PREDICTED: 50S ribosomal protein L17, chloro...   151   4e-34

>ref|XP_002326259.1| predicted protein [Populus trichocarpa] gi|222833452|gb|EEE71929.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  158 bits (400), Expect = 3e-36
 Identities = 87/152 (57%), Positives = 94/152 (61%)
 Frame = +3

Query: 267 DSSCFGSLLTVIDNGSKFFAMRHGRKVPKLNRPPDQRRALLRSLTTQLLKYGRIKTTXXX 446
           D+S FG     +DNGS+FFAMRHGR+VPKLNRPPDQRRALLR LTTQLLK+GRIKTT   
Sbjct: 3   DNSTFGHAFPSVDNGSRFFAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTT--- 59

Query: 447 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGFIYEKQIVH 626
                                                           ALGFIYEKQIVH
Sbjct: 60  --------------------RARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVH 99

Query: 627 ALFAEVPERYGERDGGYTRIIRTLPRRGDNAP 722
           ALFAEVP+RYGER+GGYTRIIRTLPRRGDNAP
Sbjct: 100 ALFAEVPDRYGERNGGYTRIIRTLPRRGDNAP 131


>gb|ABK93931.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  158 bits (400), Expect = 3e-36
 Identities = 87/152 (57%), Positives = 94/152 (61%)
 Frame = +3

Query: 267 DSSCFGSLLTVIDNGSKFFAMRHGRKVPKLNRPPDQRRALLRSLTTQLLKYGRIKTTXXX 446
           D+S FG     +DNGS+FFAMRHGR+VPKLNRPPDQRRALLR LTTQLLK+GRIKTT   
Sbjct: 89  DNSTFGHAFPSVDNGSRFFAMRHGRRVPKLNRPPDQRRALLRGLTTQLLKHGRIKTT--- 145

Query: 447 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGFIYEKQIVH 626
                                                           ALGFIYEKQIVH
Sbjct: 146 --------------------RARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVH 185

Query: 627 ALFAEVPERYGERDGGYTRIIRTLPRRGDNAP 722
           ALFAEVP+RYGER+GGYTRIIRTLPRRGDNAP
Sbjct: 186 ALFAEVPDRYGERNGGYTRIIRTLPRRGDNAP 217


>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  157 bits (396), Expect = 8e-36
 Identities = 88/152 (57%), Positives = 93/152 (61%)
 Frame = +3

Query: 267 DSSCFGSLLTVIDNGSKFFAMRHGRKVPKLNRPPDQRRALLRSLTTQLLKYGRIKTTXXX 446
           DS+ F    TVIDNG + FAMRHGRKVPKLNRPPDQRRALLR LTTQLLK+GRIKTT   
Sbjct: 70  DSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTTQLLKHGRIKTT--- 126

Query: 447 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGFIYEKQIVH 626
                                                           ALGFIYEKQIVH
Sbjct: 127 --------------------KARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVH 166

Query: 627 ALFAEVPERYGERDGGYTRIIRTLPRRGDNAP 722
           ALFAEVP+RYGER+GGYTRIIRTLPRRGDNAP
Sbjct: 167 ALFAEVPDRYGERNGGYTRIIRTLPRRGDNAP 198


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  154 bits (388), Expect = 7e-35
 Identities = 84/148 (56%), Positives = 90/148 (60%)
 Frame = +3

Query: 279 FGSLLTVIDNGSKFFAMRHGRKVPKLNRPPDQRRALLRSLTTQLLKYGRIKTTXXXXXXX 458
           F    T+IDNG + +AMRHGR+VPKLNRPPDQRRAL+R LTTQLLKYGRIKTT       
Sbjct: 85  FSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAI 144

Query: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGFIYEKQIVHALFA 638
                                                       ALGFIYEKQIVHALFA
Sbjct: 145 RKYVDKMITLAKDGSLHKRRQ-----------------------ALGFIYEKQIVHALFA 181

Query: 639 EVPERYGERDGGYTRIIRTLPRRGDNAP 722
           EVPERYGER+GGYTRIIRTLPRRGDNAP
Sbjct: 182 EVPERYGERNGGYTRIIRTLPRRGDNAP 209


>ref|XP_003538348.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Glycine
           max]
          Length = 214

 Score =  151 bits (382), Expect = 4e-34
 Identities = 84/143 (58%), Positives = 88/143 (61%)
 Frame = +3

Query: 294 TVIDNGSKFFAMRHGRKVPKLNRPPDQRRALLRSLTTQLLKYGRIKTTXXXXXXXXXXXX 473
           T+IDNG +  AMRHGRKVPKLNRPPDQRRAL+R LTTQLLKYGRIKTT            
Sbjct: 88  TIIDNGGRVSAMRHGRKVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKFVD 147

Query: 474 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGFIYEKQIVHALFAEVPER 653
                                                  ALGFIYEKQIVHALFAEVPER
Sbjct: 148 KMITLAKDGSLHKRRQ-----------------------ALGFIYEKQIVHALFAEVPER 184

Query: 654 YGERDGGYTRIIRTLPRRGDNAP 722
           YGER+GGYTRIIRTLPRRGDNAP
Sbjct: 185 YGERNGGYTRIIRTLPRRGDNAP 207