BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007193
         (2996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...   514   e-149
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...   458   e-130
dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]                458   e-130
ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp....   456   e-130
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-126

>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  514 bits (1325), Expect(2) = e-149
 Identities = 252/499 (50%), Positives = 341/499 (68%), Gaps = 2/499 (0%)
 Frame = -1

Query: 2480 DRLKNMRERITWS--EIGIVGCTIEAAHIEDASIIRYLCFKGKLGVALSLRYKLVKKGLQ 2307
            +RLK+MRE I  S  ++G+ G +++ ++   AS++R LC  GKLG AL LR KL+ KG  
Sbjct: 98   ERLKSMRESIGISSVKVGLAGRSVDVSYAGHASLVRDLCLAGKLGAALWLRRKLLHKGFV 157

Query: 2306 PNILTHNHLINGLCKSGDLGKAESLVEEMLHSGPSPNCVTYNTLIRGYCLKNSVDKALNV 2127
            P+ILTHN L+NGLC SGDL KA+ L++EML  GPSPNC T+NT I+GYCL N+VDKAL +
Sbjct: 158  PDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYL 217

Query: 2126 FSMMAHYGVMPNTVSCNILVHALCNKGLVEDAKKLLQNILGDNVYGVMPNTVSCNILVHA 1947
            FS M+  GV PN V+ NILVHALC +GL+EDAKKLL  +L DN                 
Sbjct: 218  FSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDN----------------- 260

Query: 1946 LCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQGVSFWKEILQKFKKAD 1767
                               ++ + +L+TSTILMDGC KNGD+ Q +  W  + Q     D
Sbjct: 261  -------------------EKARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMD 301

Query: 1766 VVAYNVIVHGLCLGRHLPLAFMYLCDMLKNGLLPDIFSYNIIIGALCKQGKINEACHVFD 1587
             VAYNV++HG CL R++ LA+ Y CDMLK GLLPDIF+YN +I  LCK GK+ EAC++ D
Sbjct: 302  SVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHD 361

Query: 1586 AMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDSYGNYG 1407
             M R+GV PDQI+Y+++I+GLC+ G V  ANE L CML+  +V E  VWN+IID +   G
Sbjct: 362  VMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCG 421

Query: 1406 NIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPDVVTYN 1227
            +     S++DQM+ +GV PN++TYNAL+   +++GN+V+A SLKK ML +G+FPDV+TYN
Sbjct: 422  DSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYN 481

Query: 1226 LFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKCYSMLGKMKEASDLLDKMLES 1047
            L +G ACN G + IA+ L+ EM+  G++PDI+TYTEL++   M G MKEA +L  K+  +
Sbjct: 482  LLIGTACNAGRISIAVQLYYEMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNT 541

Query: 1046 GLSVDHVPFIILMKKNFKM 990
            GL+VDHVPF +L+K  F +
Sbjct: 542  GLTVDHVPFQLLIKNTFNL 560



 Score = 42.4 bits (98), Expect(2) = e-149
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = -3

Query: 2682 DAKISVISNELEEERDQKNDFSDGNGDSGAVFNVLDVMLRDSLDRLKNMR 2533
            D  +  +SN     RD KN   +   D   VFNVLD ML+ SL+RLK+MR
Sbjct: 57   DDMVKTLSNRCRLRRDNKN--LNDEDDPQVVFNVLDAMLKGSLERLKSMR 104


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g24830 gi|22655280|gb|AAM98230.1| putative protein
            [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
            At5g24830 [Arabidopsis thaliana]
            gi|332005984|gb|AED93367.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  458 bits (1179), Expect(2) = e-130
 Identities = 232/517 (44%), Positives = 330/517 (63%), Gaps = 6/517 (1%)
 Frame = -1

Query: 2480 DRLKNMRERITWSEIGIVGCTIEAAHIED-----ASIIRYLCFKGKLGVALSLRYKLVKK 2316
            DRL ++RE +         C  ++   +D     +SI+R LC +GKL  AL LR K++  
Sbjct: 100  DRLASLRESV---------CQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYS 150

Query: 2315 GLQPNILTHNHLINGLCKSGDLGKAESLVEEMLHSGPSPNCVTYNTLIRGYCLKNSVDKA 2136
            G+ P ++THNHL+NGLCK+G + KA+ LV EM   GPSPNCV+YNTLI+G C  N+VDKA
Sbjct: 151  GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210

Query: 2135 LNVFSMMAHYGVMPNTVSCNILVHALCNKGLV-EDAKKLLQNILGDNVYGVMPNTVSCNI 1959
            L +F+ M  YG+ PN V+CNI+VHALC KG++  + KKLL+ IL  +      + V C  
Sbjct: 211  LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVIC-- 268

Query: 1958 LVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQGVSFWKEILQKF 1779
                                             TILMD CFKNG++ Q +  WKE+ QK 
Sbjct: 269  ---------------------------------TILMDSCFKNGNVVQALEVWKEMSQKN 295

Query: 1778 KKADVVAYNVIVHGLCLGRHLPLAFMYLCDMLKNGLLPDIFSYNIIIGALCKQGKINEAC 1599
              AD V YNVI+ GLC   ++  A+ ++CDM+K G+ PD+F+YN +I ALCK+GK +EAC
Sbjct: 296  VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355

Query: 1598 HVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDSY 1419
             +   M   GV PDQI+Y++II+GLC +G V+ ANEFL+ MLK+ L+ E L+WNV+ID Y
Sbjct: 356  DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415

Query: 1418 GNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPDV 1239
            G YG+    LS+ + M+ YGV+PN+YT NAL+   ++ G L++A  +K EM    I PD 
Sbjct: 416  GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475

Query: 1238 VTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKCYSMLGKMKEASDLLDK 1059
             TYNL +GAAC  GHL +A  L+ EM+ RG +PDI+TYTEL++     G++K+A  LL +
Sbjct: 476  TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535

Query: 1058 MLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWL 948
            +  +G+++DHVPF+IL KK  +++   + + +Y+KWL
Sbjct: 536  IQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572



 Score = 37.4 bits (85), Expect(2) = e-130
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
 Frame = -3

Query: 2802 RIINNSFQTIDFIQDRIARFCKKNIDLDLLDSRYCQARID-DAKISVISNELEEER---D 2635
            R++N   Q++DF+ D ++R     I  +L D     + I+    IS   + L  E+   D
Sbjct: 19   RLLN---QSLDFVSDNVSRLLAP-IFTNLRDFEMRLSCIERPPSISGNHSHLCTEKWFSD 74

Query: 2634 QKNDFSDGNGDSGAVFNVLDVMLRDSLDRLKNMR 2533
            QK+   D   D  A+FNVLD +L+ SLDRL ++R
Sbjct: 75   QKD--YDQKEDPEAIFNVLDYILKSSLDRLASLR 106



 Score =  121 bits (303), Expect = 1e-24
 Identities = 96/416 (23%), Positives = 190/416 (45%), Gaps = 7/416 (1%)
 Frame = -1

Query: 2165 YCLKNSVDKALNVFSMMAHYGVMPNTVSCNI---LVHALCNKGLVEDAKKLLQNILGDNV 1995
            Y LK+S+D+  ++   +            +I   ++  LC +G ++ A  L + ++    
Sbjct: 93   YILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYS-- 150

Query: 1994 YGVMPNTVSCNILVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQ 1815
             GV+P  ++ N L++ LCK   +E A  L++ +       + V+   L+ G     ++ +
Sbjct: 151  -GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDK 209

Query: 1814 GVSFWKEILQKFKKADVVAYNVIVHGLC----LGRHLPLAFMYLCDMLKNGLLPDIFSYN 1647
             +  +  + +   + + V  N+IVH LC    +G +       + D  +     DI    
Sbjct: 210  ALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICT 269

Query: 1646 IIIGALCKQGKINEACHVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKN 1467
            I++ +  K G + +A  V+  MS+  V  D + Y +IIRGLCS+G +  A  F+  M+K 
Sbjct: 270  ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329

Query: 1466 CLVAEPLVWNVIIDSYGNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEA 1287
             +  +   +N +I +    G   +   L   M   GV P+  +Y  +++     G++  A
Sbjct: 330  GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389

Query: 1286 DSLKKEMLYNGIFPDVVTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKC 1107
            +     ML + + P+V+ +N+ +      G    A+S+   M+  G KP++ T   L+  
Sbjct: 390  NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449

Query: 1106 YSMLGKMKEASDLLDKMLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWLRRG 939
            Y   G++ +A  + ++M  + +  D   + +L+     +      F LY + LRRG
Sbjct: 450  YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505


>dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score =  458 bits (1179), Expect(2) = e-130
 Identities = 232/517 (44%), Positives = 330/517 (63%), Gaps = 6/517 (1%)
 Frame = -1

Query: 2480 DRLKNMRERITWSEIGIVGCTIEAAHIED-----ASIIRYLCFKGKLGVALSLRYKLVKK 2316
            DRL ++RE +         C  ++   +D     +SI+R LC +GKL  AL LR K++  
Sbjct: 100  DRLASLRESV---------CQAKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYS 150

Query: 2315 GLQPNILTHNHLINGLCKSGDLGKAESLVEEMLHSGPSPNCVTYNTLIRGYCLKNSVDKA 2136
            G+ P ++THNHL+NGLCK+G + KA+ LV EM   GPSPNCV+YNTLI+G C  N+VDKA
Sbjct: 151  GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210

Query: 2135 LNVFSMMAHYGVMPNTVSCNILVHALCNKGLV-EDAKKLLQNILGDNVYGVMPNTVSCNI 1959
            L +F+ M  YG+ PN V+CNI+VHALC KG++  + KKLL+ IL  +      + V C  
Sbjct: 211  LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVIC-- 268

Query: 1958 LVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQGVSFWKEILQKF 1779
                                             TILMD CFKNG++ Q +  WKE+ QK 
Sbjct: 269  ---------------------------------TILMDSCFKNGNVVQALEVWKEMSQKN 295

Query: 1778 KKADVVAYNVIVHGLCLGRHLPLAFMYLCDMLKNGLLPDIFSYNIIIGALCKQGKINEAC 1599
              AD V YNVI+ GLC   ++  A+ ++CDM+K G+ PD+F+YN +I ALCK+GK +EAC
Sbjct: 296  VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355

Query: 1598 HVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDSY 1419
             +   M   GV PDQI+Y++II+GLC +G V+ ANEFL+ MLK+ L+ E L+WNV+ID Y
Sbjct: 356  DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415

Query: 1418 GNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPDV 1239
            G YG+    LS+ + M+ YGV+PN+YT NAL+   ++ G L++A  +K EM    I PD 
Sbjct: 416  GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475

Query: 1238 VTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKCYSMLGKMKEASDLLDK 1059
             TYNL +GAAC  GHL +A  L+ EM+ RG +PDI+TYTEL++     G++K+A  LL +
Sbjct: 476  TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535

Query: 1058 MLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWL 948
            +  +G+++DHVPF+IL KK  +++   + + +Y+KWL
Sbjct: 536  IQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572



 Score = 37.4 bits (85), Expect(2) = e-130
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
 Frame = -3

Query: 2802 RIINNSFQTIDFIQDRIARFCKKNIDLDLLDSRYCQARID-DAKISVISNELEEER---D 2635
            R++N   Q++DF+ D ++R     I  +L D     + I+    IS   + L  E+   D
Sbjct: 19   RLLN---QSLDFVSDNVSRLLAP-IFTNLRDLEMRLSCIERPPSISGNHSHLCTEKWFSD 74

Query: 2634 QKNDFSDGNGDSGAVFNVLDVMLRDSLDRLKNMR 2533
            QK+   D   D  A+FNVLD +L+ SLDRL ++R
Sbjct: 75   QKD--YDQKEDPEAIFNVLDYILKSSLDRLASLR 106



 Score =  121 bits (303), Expect = 1e-24
 Identities = 96/416 (23%), Positives = 190/416 (45%), Gaps = 7/416 (1%)
 Frame = -1

Query: 2165 YCLKNSVDKALNVFSMMAHYGVMPNTVSCNI---LVHALCNKGLVEDAKKLLQNILGDNV 1995
            Y LK+S+D+  ++   +            +I   ++  LC +G ++ A  L + ++    
Sbjct: 93   YILKSSLDRLASLRESVCQAKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYS-- 150

Query: 1994 YGVMPNTVSCNILVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQ 1815
             GV+P  ++ N L++ LCK   +E A  L++ +       + V+   L+ G     ++ +
Sbjct: 151  -GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDK 209

Query: 1814 GVSFWKEILQKFKKADVVAYNVIVHGLC----LGRHLPLAFMYLCDMLKNGLLPDIFSYN 1647
             +  +  + +   + + V  N+IVH LC    +G +       + D  +     DI    
Sbjct: 210  ALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICT 269

Query: 1646 IIIGALCKQGKINEACHVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKN 1467
            I++ +  K G + +A  V+  MS+  V  D + Y +IIRGLCS+G +  A  F+  M+K 
Sbjct: 270  ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329

Query: 1466 CLVAEPLVWNVIIDSYGNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEA 1287
             +  +   +N +I +    G   +   L   M   GV P+  +Y  +++     G++  A
Sbjct: 330  GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389

Query: 1286 DSLKKEMLYNGIFPDVVTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKC 1107
            +     ML + + P+V+ +N+ +      G    A+S+   M+  G KP++ T   L+  
Sbjct: 390  NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449

Query: 1106 YSMLGKMKEASDLLDKMLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWLRRG 939
            Y   G++ +A  + ++M  + +  D   + +L+     +      F LY + LRRG
Sbjct: 450  YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505


>ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317966|gb|EFH48388.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  456 bits (1173), Expect(2) = e-130
 Identities = 233/517 (45%), Positives = 324/517 (62%), Gaps = 6/517 (1%)
 Frame = -1

Query: 2480 DRLKNMRERITWSEIGIVGCTIEAAHIEDA-----SIIRYLCFKGKLGVALSLRYKLVKK 2316
            DRL ++RE +         C  +    +D+     SI+R LC +GK+  AL LR K+++ 
Sbjct: 98   DRLASLRESV---------CQTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRS 148

Query: 2315 GLQPNILTHNHLINGLCKSGDLGKAESLVEEMLHSGPSPNCVTYNTLIRGYCLKNSVDKA 2136
            G  P ++ HNHL+NGLCK G + KA+ LV EM   GPSPNCV+YNTLI+G C  N+VDKA
Sbjct: 149  GFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 208

Query: 2135 LNVFSMMAHYGVMPNTVSCNILVHALCNKGLV-EDAKKLLQNILGDNVYGVMPNTVSCNI 1959
            L +FS +  YG+ PN V+CNI+VHALC KG++  +  KLL+ IL  +      + V+C  
Sbjct: 209  LYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTC-- 266

Query: 1958 LVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNGDLFQGVSFWKEILQKF 1779
                                             TILMD CFKNG++ Q +  WKE+ QK 
Sbjct: 267  ---------------------------------TILMDSCFKNGNVVQALEVWKEMSQKN 293

Query: 1778 KKADVVAYNVIVHGLCLGRHLPLAFMYLCDMLKNGLLPDIFSYNIIIGALCKQGKINEAC 1599
               D V YNVI+ GLC   ++  A+ ++CDM+K G+ PD+F+YN +I ALCK GK + AC
Sbjct: 294  VPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVAC 353

Query: 1598 HVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDSY 1419
             +   M  +GV PDQI+Y++II+GLC  G VD ANEFL  MLK  L+ E L+WNV+ID Y
Sbjct: 354  DLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGY 413

Query: 1418 GNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPDV 1239
            G YG+    LS+ + M+ YGV+PN+YT NAL+   ++ G L++A  +K EM    I PD 
Sbjct: 414  GRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 473

Query: 1238 VTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKCYSMLGKMKEASDLLDK 1059
             TYNL VGAAC  GHL +A  L+ EM+ RG +PDI+TYTEL++     G++KEA  LL +
Sbjct: 474  TTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSR 533

Query: 1058 MLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWL 948
            M  SG+++DHVPF+IL+KK  +++  D+ + +Y+KWL
Sbjct: 534  MQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWL 570



 Score = 38.5 bits (88), Expect(2) = e-130
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -3

Query: 2802 RIINNSFQTIDFIQDRIARFCKKNIDLDLLDSRYCQARIDDAKISVISNELEEERDQK-- 2629
            R++N   Q++DF+ D ++R     I  +L D     + I+  + S IS +      +K  
Sbjct: 19   RLLN---QSLDFVSDNVSRILAP-IVTNLRDFEMRLSCIE--RPSSISGKHSHLCTEKWF 72

Query: 2628 NDFSDGNGDSGAVFNVLDVMLRDSLDRLKNMR 2533
            +D  D   D  A+FNVLD +L+ SLDRL ++R
Sbjct: 73   SDQKDQKRDPEAIFNVLDYILKSSLDRLASLR 104



 Score =  130 bits (328), Expect = 2e-27
 Identities = 102/420 (24%), Positives = 183/420 (43%), Gaps = 4/420 (0%)
 Frame = -1

Query: 2186 YNTLIRGYCLKNSVDKALNVFSMMAHYGVMPNTVSCNILVHALCNKGLVEDAKKLLQNIL 2007
            +++++R  CL+  +D AL +   M   G +P  +  N L++ LC  G +E A  L++ + 
Sbjct: 122  HSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREM- 180

Query: 2006 GDNVYGVMPNTVSCNILVHALCKKVLVEDAKKLLQNILGDEKKASLVTSTILMDGCFKNG 1827
                 G  PN VS N L+  LC               + +  KA  + ST+   G     
Sbjct: 181  --REMGPSPNCVSYNTLIKGLCS--------------VNNVDKALYLFSTLNKYGI---- 220

Query: 1826 DLFQGVSFWKEILQKFKKADVVAYNVIVHGLC----LGRHLPLAFMYLCDMLKNGLLPDI 1659
                             K + V  N+IVH LC    +G +       + D  +     DI
Sbjct: 221  -----------------KPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDI 263

Query: 1658 FSYNIIIGALCKQGKINEACHVFDAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLIC 1479
             +  I++ +  K G + +A  V+  MS+  V  D + Y +IIRGLCS+G +  A  F+  
Sbjct: 264  VTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCD 323

Query: 1478 MLKNCLVAEPLVWNVIIDSYGNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGN 1299
            M+K  +  +   +N +I +    G       L   M   GV P+  +Y  +++     G+
Sbjct: 324  MVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGD 383

Query: 1298 LVEADSLKKEMLYNGIFPDVVTYNLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTE 1119
            +  A+   + ML   + P+V+ +N+ +      G    A+S+   M+  G KP++ T   
Sbjct: 384  VDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNA 443

Query: 1118 LLKCYSMLGKMKEASDLLDKMLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWLRRG 939
            L+  Y   G++ +A  + ++M  + +  D   + +L+     +      F LY + L+RG
Sbjct: 444  LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRG 503


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein At5g24830-like
            [Vitis vinifera]
          Length = 580

 Score =  446 bits (1147), Expect(2) = e-126
 Identities = 219/509 (43%), Positives = 323/509 (63%), Gaps = 3/509 (0%)
 Frame = -1

Query: 2480 DRLKNMRERITWSEIGIVGCTIEAAHIEDASIIRYLCFKGKLGVALSLRYKLVKKGLQPN 2301
            +RLK MRE ++ ++IG+ GCT+E  +    ++IR LC +                     
Sbjct: 106  ERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLE--------------------- 144

Query: 2300 ILTHNHLINGLCKSGDLGKAESLVEEMLHSGPSPNCVTYNTLIRGYCLKNSVDKALNVFS 2121
                          G L  A  L  +M+  G  P+ +T+N L+ G C    ++KA N+  
Sbjct: 145  --------------GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVR 190

Query: 2120 MMAHYGVMPNTVSCNILVHALCNKGLVEDAKKLLQNILGDNVYGVMPNTVSCNILVHALC 1941
             M   G  PN  + N  +   C    V+ A  L   +      G+ PN V+ NIL+HALC
Sbjct: 191  EMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANS---GIGPNKVTYNILIHALC 247

Query: 1940 KKVLVEDAKKLLQNILGDE---KKASLVTSTILMDGCFKNGDLFQGVSFWKEILQKFKKA 1770
            KK L++DA+KLL+ IL D+   + + ++TSTI MDGC K GD+ Q +  W E+LQ+  + 
Sbjct: 248  KKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQI 307

Query: 1769 DVVAYNVIVHGLCLGRHLPLAFMYLCDMLKNGLLPDIFSYNIIIGALCKQGKINEACHVF 1590
            DVVAYNV++HG CL + +  A+ Y C+M K GLLPDIF+YN +I   CK G ++EAC++ 
Sbjct: 308  DVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIH 367

Query: 1589 DAMSRIGVCPDQITYRLIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDSYGNY 1410
              MS++G  PD I+Y++II+GLC +G V  AN+FL+CML+N +V EPL+WNV+ID +G +
Sbjct: 368  GVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRH 427

Query: 1409 GNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPDVVTY 1230
            G++   LS++DQM+ +G+ PN++TYNAL+   ++ GN+V+A S+KKEML NGI+PDVVTY
Sbjct: 428  GDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTY 487

Query: 1229 NLFVGAACNEGHLHIAISLHQEMVLRGYKPDIVTYTELLKCYSMLGKMKEASDLLDKMLE 1050
            NL +GAACN G +H A+ L+ EM+ RGY+PDI+TYTEL++ + + G + EA +LL K+  
Sbjct: 488  NLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQR 547

Query: 1049 SGLSVDHVPFIILMKKNFKMREFDKLFDL 963
            SGLS+DH PF IL++K  + R   + +DL
Sbjct: 548  SGLSIDHAPFQILIQKYCRTRVPGRAYDL 576



 Score = 36.6 bits (83), Expect(2) = e-126
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -3

Query: 2688 IDDAKISVISNELEEERD--QKNDFSDGNGDSGAVFNVLDVMLRDSLDRLKNMR 2533
            ++D  ISV +      +D   +N   D   D   VFNVLD +L+DSL+RLK MR
Sbjct: 59   LEDLIISVGNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMR 112



 Score = 74.7 bits (182), Expect = 1e-10
 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 8/224 (3%)
 Frame = -1

Query: 1586 AMSRIGV--CPDQITYR---LIIRGLCSNGAVDMANEFLICMLKNCLVAEPLVWNVIIDS 1422
            ++++IG+  C  ++ Y     +IR LC  G +  A      M++  ++ + L  N +++ 
Sbjct: 116  SLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNG 175

Query: 1421 YGNYGNIHKCLSLKDQMIEYGVRPNIYTYNALVRVALRSGNLVEADSLKKEMLYNGIFPD 1242
                G++ K  +L  +M+E G  PN  T+N  ++    + N+ +A  L   M  +GI P+
Sbjct: 176  LCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPN 235

Query: 1241 VVTYNLFVGAACNEGHLHIAISLHQEMV---LRGYKPDIVTYTELLKCYSMLGKMKEASD 1071
             VTYN+ + A C +G L  A  L ++++         DI+T T  +      G M +A  
Sbjct: 236  KVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALV 295

Query: 1070 LLDKMLESGLSVDHVPFIILMKKNFKMREFDKLFDLYQKWLRRG 939
              D+ML+ G  +D V + +L+     +++ +  +  + +  +RG
Sbjct: 296  HWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRG 339