BLASTX nr result

ID: Lithospermum22_contig00007162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007162
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...    83   5e-27
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...    84   1e-25
ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-25
emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]    83   6e-25
ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...    83   6e-25

>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
           gi|223548972|gb|EEF50461.1| ring finger protein,
           putative [Ricinus communis]
          Length = 201

 Score = 82.8 bits (203), Expect(2) = 5e-27
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 9   LEDAQCVICLGEYEEKEVLRIMPRCGHTFHLSCIDVWLKRQ 131
           +EDAQC ICLGEY+EKEVLRIMP+CGH FHLSCIDVWL++Q
Sbjct: 82  VEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 122



 Score = 65.1 bits (157), Expect(2) = 5e-27
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = +2

Query: 182 VWLKRQSTCPVCRLPVQDSLENESIPSATLGSEAQSLDNSGIPNEHSRSWLLATAEQSEV 361
           VWL++QSTCPVCR P+QD+LE + +  AT+ S  +S+D+     EHSR WLL   ++S  
Sbjct: 117 VWLRKQSTCPVCRFPIQDTLEAKHMRQATM-SMVRSIDSPETSTEHSRQWLLPGPDRSMG 175

Query: 362 HRNNE 376
           + +N+
Sbjct: 176 NASNQ 180


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score = 84.0 bits (206), Expect(2) = 1e-25
 Identities = 34/42 (80%), Positives = 41/42 (97%)
 Frame = +3

Query: 6   TLEDAQCVICLGEYEEKEVLRIMPRCGHTFHLSCIDVWLKRQ 131
           ++EDAQC ICLGEYEEKEVLRIMP+CGH+FHL+CIDVWL++Q
Sbjct: 83  SIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQ 124



 Score = 59.3 bits (142), Expect(2) = 1e-25
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = +2

Query: 182 VWLKRQSTCPVCRLPVQDSLENESIPSATLGSEAQSLDNSGIPNE-HSRSWLLATAEQSE 358
           VWL++QSTCPVCRLP+QDS   +     T+ S  QS D S I  + HS+ WLL    +SE
Sbjct: 119 VWLRKQSTCPVCRLPLQDSFRTKPARPMTV-SRDQSFDGSEISTDHHSQHWLLPGPNRSE 177

Query: 359 VHRNNE 376
            + +N+
Sbjct: 178 GNTSNQ 183


>ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|222843046|gb|EEE80593.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 80.9 bits (198), Expect(2) = 2e-25
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 12  EDAQCVICLGEYEEKEVLRIMPRCGHTFHLSCIDVWLKRQ 131
           EDAQC ICLGEY+EKEVLRIMP CGH FHLSCIDVWL++Q
Sbjct: 78  EDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQ 117



 Score = 61.6 bits (148), Expect(2) = 2e-25
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = +2

Query: 182 VWLKRQSTCPVCRLPVQDSLENESIPSATLGSEAQSLDNSGIPNEHSRSWLLATAEQSEV 361
           VWL++QSTCPVCR P+QDS E + +    + S  QS+D+    +E SR WLL + + S  
Sbjct: 112 VWLRKQSTCPVCRFPIQDSFEAKHMRQTAI-SMVQSIDSPDTRSEQSRQWLLPSYQGSAG 170

Query: 362 HRNNE 376
           + +NE
Sbjct: 171 NHSNE 175


>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score = 83.2 bits (204), Expect(2) = 6e-25
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +3

Query: 6   TLEDAQCVICLGEYEEKEVLRIMPRCGHTFHLSCIDVWLKRQ 131
           ++EDAQC ICLGEY+EKEVLRIMP+CGH FHLSCIDVWL++Q
Sbjct: 103 SVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 144



 Score = 57.8 bits (138), Expect(2) = 6e-25
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 182 VWLKRQSTCPVCRLPVQDSLENESIPSATLGSEAQSLDNSGIPNEHSRSWLLATAEQSEV 361
           VWL++QSTCPVCRL +QDS E + +      + AQS+D+  I  + S  WLL   E+S  
Sbjct: 139 VWLRKQSTCPVCRLSLQDSFETKHVRPEAFDT-AQSVDSPEISVDRSHQWLLPGPERSVE 197

Query: 362 HRNNEV 379
           +  N+V
Sbjct: 198 NGTNQV 203


>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
           gi|296089077|emb|CBI38780.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score = 83.2 bits (204), Expect(2) = 6e-25
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +3

Query: 6   TLEDAQCVICLGEYEEKEVLRIMPRCGHTFHLSCIDVWLKRQ 131
           ++EDAQC ICLGEY+EKEVLRIMP+CGH FHLSCIDVWL++Q
Sbjct: 80  SVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQ 121



 Score = 57.8 bits (138), Expect(2) = 6e-25
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 182 VWLKRQSTCPVCRLPVQDSLENESIPSATLGSEAQSLDNSGIPNEHSRSWLLATAEQSEV 361
           VWL++QSTCPVCRL +QDS E + +      + AQS+D+  I  + S  WLL   E+S  
Sbjct: 116 VWLRKQSTCPVCRLSLQDSFETKHVRPEAFDT-AQSVDSPEISVDRSHQWLLPGPERSVE 174

Query: 362 HRNNEV 379
           +  N+V
Sbjct: 175 NGTNQV 180


Top