BLASTX nr result
ID: Lithospermum22_contig00007081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00007081
(1129 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 228 e-121
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 196 e-111
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 194 e-106
ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|2... 191 e-106
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 192 e-106
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 228 bits (582), Expect(4) = e-121
Identities = 110/148 (74%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Frame = -1
Query: 868 VLAHRLGLIPLNVDPRLFEYMSENDVSNEKNTIAFKLQARCEKGG-RKTVKSDELKWLPS 692
VLAHRLGLIP+N DPRLF+ +SEND NEKNTI F L RCE+GG R TVKS+ELKWLP
Sbjct: 121 VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH 180
Query: 691 GSELLLPTEKAAASSTSKPRTYTSFNSNQDSVPEFHDNPIGPKYPGINLARLGPGQEIEL 512
GSE L TE +SSTSKP+TYTSF+ +QDS+PEF D IGPK+P I +A+LGPGQEIEL
Sbjct: 181 GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL 240
Query: 511 EAYAVKGMGKTHAKWSPVATAWYKMLPE 428
EA+AVKGMGKTHAKWSPVATAWY+MLPE
Sbjct: 241 EAHAVKGMGKTHAKWSPVATAWYRMLPE 268
Score = 159 bits (403), Expect(4) = e-121
Identities = 77/95 (81%), Positives = 84/95 (88%)
Frame = -3
Query: 425 EEAEKLIVKCPMKVFDIEDIGKNKKRAVVARPRQCTLSRECIRGYGWDKKVAIRRVKDHF 246
E+AE+L+ KCP+ VFDIEDI K KK+A VARPR CTL RECIRG WDK VAIRRVK+HF
Sbjct: 278 EKAEELVKKCPVNVFDIEDIAKGKKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHF 337
Query: 245 IFTIESTGALPPEVLFTEAVKILEDKCERVITELS 141
IFTIESTGALPPEVLF EAVK+LEDKCERVITELS
Sbjct: 338 IFTIESTGALPPEVLFNEAVKVLEDKCERVITELS 372
Score = 89.0 bits (219), Expect(4) = e-121
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -2
Query: 1083 SLRLDQFRSNFRXXXXXXXXXXXXEDYSIEFDMIGIDASIANAFRRILIAEVPTMAIEKV 904
SLR+DQF +NFR + +EFDMIGID SIANAFRRILIAE+PTMAIEKV
Sbjct: 55 SLRMDQFCNNFRVEVIRLS------EDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKV 108
Query: 903 LIVNNTSVIQDKSL--RIGLV 847
LI NNTS++QD+ L R+GL+
Sbjct: 109 LIANNTSIVQDEVLAHRLGLI 129
Score = 29.6 bits (65), Expect(4) = e-121
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3
Query: 1127 NIQYSGAYASVGVDTA 1080
N+QYSGAY+S+GVD +
Sbjct: 40 NVQYSGAYSSMGVDNS 55
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 196 bits (497), Expect(4) = e-111
Identities = 99/148 (66%), Positives = 115/148 (77%), Gaps = 1/148 (0%)
Frame = -1
Query: 868 VLAHRLGLIPLNVDPRLFEYMSENDVSNEKNTIAFKLQARCEKGG-RKTVKSDELKWLPS 692
VLAHRLGLIP+N DPRLFEY+S ND NEKNTI FKL A C++G R+TV S+ELKWLP
Sbjct: 131 VLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKWLPG 190
Query: 691 GSELLLPTEKAAASSTSKPRTYTSFNSNQDSVPEFHDNPIGPKYPGINLARLGPGQEIEL 512
GS+LL +EKA SKP TYTSF QD +P+ P+ P I +A+LGPGQEIEL
Sbjct: 191 GSQLLKESEKA----DSKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAKLGPGQEIEL 242
Query: 511 EAYAVKGMGKTHAKWSPVATAWYKMLPE 428
EA+AVKG+GKTHAKWSPVATAWY+MLPE
Sbjct: 243 EAHAVKGLGKTHAKWSPVATAWYRMLPE 270
Score = 160 bits (406), Expect(4) = e-111
Identities = 78/95 (82%), Positives = 84/95 (88%)
Frame = -3
Query: 425 EEAEKLIVKCPMKVFDIEDIGKNKKRAVVARPRQCTLSRECIRGYGWDKKVAIRRVKDHF 246
E AE+L KCP+ VFDIEDIG KKRA VARPR CTL RECIRG WDK+V++RRVKDHF
Sbjct: 280 EIAEELTKKCPVNVFDIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHF 339
Query: 245 IFTIESTGALPPEVLFTEAVKILEDKCERVITELS 141
IFTIESTGALPPEVLFTEAVK+LEDKCERVITELS
Sbjct: 340 IFTIESTGALPPEVLFTEAVKVLEDKCERVITELS 374
Score = 85.5 bits (210), Expect(4) = e-111
Identities = 49/81 (60%), Positives = 59/81 (72%), Gaps = 2/81 (2%)
Frame = -2
Query: 1083 SLRLDQFRSNFRXXXXXXXXXXXXEDYSIEFDMIGIDASIANAFRRILIAEVPTMAIEKV 904
SL+LD FR NF+ +EFDMIGIDA+IANAFRRILI+E+PTMAIEKV
Sbjct: 65 SLQLDCFRDNFKVEVIQLTKD------DMEFDMIGIDAAIANAFRRILISELPTMAIEKV 118
Query: 903 LIVNNTSVIQDKSL--RIGLV 847
LI NNTS+IQD+ L R+GL+
Sbjct: 119 LIANNTSLIQDEVLAHRLGLI 139
Score = 29.3 bits (64), Expect(4) = e-111
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 1127 NIQYSGAYASVGVDTA 1080
NI YSGAYAS+GVD +
Sbjct: 50 NIVYSGAYASIGVDNS 65
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 194 bits (494), Expect(4) = e-106
Identities = 100/149 (67%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
Frame = -1
Query: 868 VLAHRLGLIPLNVDPRLFEYMSE-NDVSNEKNTIAFKLQARCEKGG-RKTVKSDELKWLP 695
VL+HRLGLIP+ DPRLFEY D NEKNTI FKL RC+ G R TVKSD+LKWLP
Sbjct: 137 VLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLP 196
Query: 694 SGSELLLPTEKAAASSTSKPRTYTSFNSNQDSVPEFHDNPIGPKYPGINLARLGPGQEIE 515
+GSEL P E ++ SKP+T+TSF +QDS+PEF +N IG Y I LA+LGPGQEIE
Sbjct: 197 NGSEL--PCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIE 254
Query: 514 LEAYAVKGMGKTHAKWSPVATAWYKMLPE 428
LEA+AVKG+GKTHAKWSPVATAWY+MLPE
Sbjct: 255 LEAHAVKGIGKTHAKWSPVATAWYRMLPE 283
Score = 150 bits (379), Expect(4) = e-106
Identities = 76/96 (79%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = -3
Query: 425 EEAEKLIVKCPMKVFDIEDIGKNKKRAVVARPRQCTLSRECIRG-YGWDKKVAIRRVKDH 249
E AE+L KCP+ VFDIEDIGK K+RA VARPR CTL RECIRG W+ +V++RRVK+H
Sbjct: 293 ELAEELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNH 352
Query: 248 FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 141
FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS
Sbjct: 353 FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 388
Score = 85.5 bits (210), Expect(4) = e-106
Identities = 49/81 (60%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -2
Query: 1083 SLRLDQFRSNFRXXXXXXXXXXXXEDYSIEFDMIGIDASIANAFRRILIAEVPTMAIEKV 904
S+RLD F NF+ D IEFDMIGID +IANAFRRILIAEVPTMAIE+V
Sbjct: 71 SVRLDSFCENFKVEVKRLT------DSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERV 124
Query: 903 LIVNNTSVIQDKSL--RIGLV 847
I NNTSV+QD+ L R+GL+
Sbjct: 125 YIANNTSVVQDEVLSHRLGLI 145
Score = 26.2 bits (56), Expect(4) = e-106
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 1124 IQYSGAYASVGVDTA 1080
+QYSGAYA +GVD +
Sbjct: 57 VQYSGAYAILGVDNS 71
>ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|222847643|gb|EEE85190.1|
predicted protein [Populus trichocarpa]
Length = 390
Score = 191 bits (486), Expect(4) = e-106
Identities = 100/148 (67%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = -1
Query: 868 VLAHRLGLIPLNVDPRLFEYMSENDVSNEKNTIAFKLQARCEKGG-RKTVKSDELKWLPS 692
VLAHRLGLIP+ VDPRLFEY+S ND NEKNTI KL ARC +G R +V S ELKWLP+
Sbjct: 143 VLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKWLPN 202
Query: 691 GSELLLPTEKAAASSTSKPRTYTSFNSNQDSVPEFHDNPIGPKYPGINLARLGPGQEIEL 512
GSE +EK SKP TYTSF+ QDS+PEF NPI I LA+LGPGQEIEL
Sbjct: 203 GSEFAKESEKP----DSKPSTYTSFSCGQDSLPEFAGNPIST-VEDIILAKLGPGQEIEL 257
Query: 511 EAYAVKGMGKTHAKWSPVATAWYKMLPE 428
EA+AVKGMGKTHAKWSPV TAWY+M PE
Sbjct: 258 EAHAVKGMGKTHAKWSPVGTAWYRMFPE 285
Score = 147 bits (371), Expect(4) = e-106
Identities = 75/97 (77%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Frame = -3
Query: 428 GEEAEKLIVKCPMKVFDIEDIGKNKKRAVVARPRQCTLSRECIRG-YGWDKKVAIRRVKD 252
GE+AE+LI KCP VFDIED G KK+A+VA R CTL RECIRG W+K+VA+ RVKD
Sbjct: 294 GEDAEELIRKCPSGVFDIEDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKD 353
Query: 251 HFIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 141
HFIFTIESTGALPPEVLFTEAVKILE KCERVITELS
Sbjct: 354 HFIFTIESTGALPPEVLFTEAVKILEAKCERVITELS 390
Score = 89.7 bits (221), Expect(4) = e-106
Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = -2
Query: 1083 SLRLDQFRSNFRXXXXXXXXXXXXEDYSIEFDMIGIDASIANAFRRILIAEVPTMAIEKV 904
SLRLD FR NFR +EFDMIGIDA++ANAFRRILI+EVPTMAIEKV
Sbjct: 77 SLRLDSFRENFRIKVIALDKD------KMEFDMIGIDAAVANAFRRILISEVPTMAIEKV 130
Query: 903 LIVNNTSVIQDKSL--RIGLV 847
I NNTSVIQD+ L R+GL+
Sbjct: 131 FIANNTSVIQDEVLAHRLGLI 151
Score = 26.9 bits (58), Expect(4) = e-106
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -3
Query: 1124 IQYSGAYASVGVDTA 1080
+QYSG+YAS+GVD +
Sbjct: 63 LQYSGSYASMGVDNS 77
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Glycine max]
Length = 393
Score = 192 bits (489), Expect(4) = e-106
Identities = 99/149 (66%), Positives = 114/149 (76%), Gaps = 2/149 (1%)
Frame = -1
Query: 868 VLAHRLGLIPLNVDPRLFEYMSE-NDVSNEKNTIAFKLQARCEKGG-RKTVKSDELKWLP 695
VL+HRLGLIP+ DPRLFEY D NEKNTI FKL RC+ G R TVKSD+LKWLP
Sbjct: 142 VLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLP 201
Query: 694 SGSELLLPTEKAAASSTSKPRTYTSFNSNQDSVPEFHDNPIGPKYPGINLARLGPGQEIE 515
+GSEL P E ++ SKP+T+TSF +QDS+PEF +N IG Y I LA+LGPGQEIE
Sbjct: 202 NGSEL--PCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIE 259
Query: 514 LEAYAVKGMGKTHAKWSPVATAWYKMLPE 428
LEA+AVKG GKTHAKWSPVAT WY+MLPE
Sbjct: 260 LEAHAVKGTGKTHAKWSPVATTWYRMLPE 288
Score = 150 bits (379), Expect(4) = e-106
Identities = 76/96 (79%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = -3
Query: 425 EEAEKLIVKCPMKVFDIEDIGKNKKRAVVARPRQCTLSRECIRG-YGWDKKVAIRRVKDH 249
E AE+L KCP+ VFDIEDIGK K+RA VARPR CTL RECIRG W+ +V++RRVK+H
Sbjct: 298 ELAEELKNKCPVNVFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNH 357
Query: 248 FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 141
FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS
Sbjct: 358 FIFTIESTGALPPEVLFTEAVKILEDKCERVITELS 393
Score = 85.5 bits (210), Expect(4) = e-106
Identities = 49/81 (60%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = -2
Query: 1083 SLRLDQFRSNFRXXXXXXXXXXXXEDYSIEFDMIGIDASIANAFRRILIAEVPTMAIEKV 904
S+RLD F NF+ D IEFDMIGID +IANAFRRILIAEVPTMAIE+V
Sbjct: 76 SVRLDSFCENFKVEVKRLT------DSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERV 129
Query: 903 LIVNNTSVIQDKSL--RIGLV 847
I NNTSV+QD+ L R+GL+
Sbjct: 130 YIANNTSVVQDEVLSHRLGLI 150
Score = 26.2 bits (56), Expect(4) = e-106
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 1124 IQYSGAYASVGVDTA 1080
+QYSGAYA +GVD +
Sbjct: 62 VQYSGAYAIMGVDNS 76