BLASTX nr result
ID: Lithospermum22_contig00007032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00007032
(1769 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp.... 335 e-105
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l... 329 e-104
ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidops... 332 e-103
ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [... 328 e-103
gb|AFK49136.1| unknown [Lotus japonicus] 329 e-103
>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328387|gb|EFH58806.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 335 bits (860), Expect(2) = e-105
Identities = 162/201 (80%), Positives = 187/201 (93%), Gaps = 1/201 (0%)
Frame = -3
Query: 1224 MVGLSIGEQHFIQGGIAQDLRTDGRKRLTYRPIYIQTGVIPQANGSARVKMGATEVIASV 1045
MVGLS+GEQHF++GGIAQDLRTDGRKRLTYRPIY++TGVIPQANGSARVK+G T+VIASV
Sbjct: 1 MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60
Query: 1044 KVELGRPNSSQPDKGRVLIFVDCSPTAEPSFEGRGGDELAMELSVALERCLMGGKSGAGA 865
K E+GRP+S QPDKG+V +F+DCSPTAEP+F GRGG+EL+ EL++AL+RCL+GGKSGAGA
Sbjct: 61 KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120
Query: 864 GIDLSSLSIVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVQVSSE-ASD 688
GI+LSSL I EGKVCWDLYIDGLV+SSDGNLLDALGAAIKAALTNT IPKV VS+E A D
Sbjct: 121 GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180
Query: 687 SQPEVDVSDEEFLQFDTSGVP 625
QPE+D+SDEE+LQFDTS VP
Sbjct: 181 EQPEIDISDEEYLQFDTSSVP 201
Score = 76.3 bits (186), Expect(2) = e-105
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -1
Query: 509 VSISLNRQGRICGLTKRGGAGLDPSVILDMISVAKHVSEELMITVD 372
VSIS+NR G ICGLTKRGG+GLDPSVILDMISVAKHV+E LM +D
Sbjct: 229 VSISVNRAGHICGLTKRGGSGLDPSVILDMISVAKHVTENLMSKLD 274
>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
Length = 286
Score = 329 bits (843), Expect(2) = e-104
Identities = 165/201 (82%), Positives = 183/201 (91%), Gaps = 1/201 (0%)
Frame = -3
Query: 1224 MVGLSIGEQHFIQGGIAQDLRTDGRKRLTYRPIYIQTGVIPQANGSARVKMGATEVIASV 1045
MVGLS+GE HFIQGGIAQDLR DGRKRLTYRPI ++TGVIPQ NGSARV+MGAT+VIASV
Sbjct: 1 MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60
Query: 1044 KVELGRPNSSQPDKGRVLIFVDCSPTAEPSFEGRGGDELAMELSVALERCLMGGKSGAGA 865
K ELG+P+ QPDKG+V I+VDCS TAEP+FEGRGGDELA ELS AL+RCL+GGKSGAGA
Sbjct: 61 KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120
Query: 864 GIDLSSLSIVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVQVSSEAS-D 688
GIDLSSL +VEGK+CWDLYIDGLVVSSDGNLLDALGAAIKAAL+NTGIP+VQV++ S D
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180
Query: 687 SQPEVDVSDEEFLQFDTSGVP 625
PEVDVSDEEFLQFDTS VP
Sbjct: 181 EHPEVDVSDEEFLQFDTSRVP 201
Score = 77.0 bits (188), Expect(2) = e-104
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = -1
Query: 509 VSISLNRQGRICGLTKRGGAGLDPSVILDMISVAKHVSEELMITVD 372
VSIS+NRQG ICG+TKRGG GLDPS+ILDMISVAKHVSE+L+ +D
Sbjct: 229 VSISVNRQGHICGITKRGGVGLDPSIILDMISVAKHVSEQLINKLD 274
>ref|NP_566318.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]
gi|30680427|ref|NP_850537.1| 3'-5'-exoribonuclease family
protein [Arabidopsis thaliana]
gi|11762184|gb|AAG40370.1|AF325018_1 AT3g07750
[Arabidopsis thaliana] gi|26453010|dbj|BAC43581.1|
putative 3' exoribonuclease [Arabidopsis thaliana]
gi|56744222|gb|AAW28551.1| At3g07750 [Arabidopsis
thaliana] gi|332641077|gb|AEE74598.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana] gi|332641078|gb|AEE74599.1|
3'-5'-exoribonuclease family protein [Arabidopsis
thaliana]
Length = 286
Score = 332 bits (850), Expect(2) = e-103
Identities = 160/200 (80%), Positives = 186/200 (93%), Gaps = 1/200 (0%)
Frame = -3
Query: 1221 VGLSIGEQHFIQGGIAQDLRTDGRKRLTYRPIYIQTGVIPQANGSARVKMGATEVIASVK 1042
+GLS+GEQHFI+GGIAQDLRTDGRKRLTYRPIY++TGVIPQANGSARV++G T+VIASVK
Sbjct: 1 MGLSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVK 60
Query: 1041 VELGRPNSSQPDKGRVLIFVDCSPTAEPSFEGRGGDELAMELSVALERCLMGGKSGAGAG 862
E+GRP+S QPDKG+V +F+DCSPTAEP+F GRGG+EL+ EL++AL+RCL+GGKSGAGAG
Sbjct: 61 AEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGAG 120
Query: 861 IDLSSLSIVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVQVSSE-ASDS 685
I+LSSL I EGKVCWDLYIDGLV+SSDGNLLDALGAAIKAALTNT IPKV VS+E A D
Sbjct: 121 INLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADDE 180
Query: 684 QPEVDVSDEEFLQFDTSGVP 625
QPE+D+SDEE+LQFDTS VP
Sbjct: 181 QPEIDISDEEYLQFDTSSVP 200
Score = 73.6 bits (179), Expect(2) = e-103
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -1
Query: 509 VSISLNRQGRICGLTKRGGAGLDPSVILDMISVAKHVSEELMITVD 372
VSIS+NR G ICGLTKR G+GLDPSVILDMISVAKHV+E LM +D
Sbjct: 228 VSISVNRTGHICGLTKRSGSGLDPSVILDMISVAKHVTETLMSKLD 273
>ref|XP_002285435.1| PREDICTED: exosome complex component RRP42 [Vitis vinifera]
gi|296082105|emb|CBI21110.3| unnamed protein product
[Vitis vinifera]
Length = 287
Score = 328 bits (841), Expect(2) = e-103
Identities = 162/201 (80%), Positives = 184/201 (91%), Gaps = 1/201 (0%)
Frame = -3
Query: 1224 MVGLSIGEQHFIQGGIAQDLRTDGRKRLTYRPIYIQTGVIPQANGSARVKMGATEVIASV 1045
MVGLS+GE+HFIQGGIAQDLRTDGR+RLTYRP ++TGVIPQANGSARV++G T+VIASV
Sbjct: 1 MVGLSVGEKHFIQGGIAQDLRTDGRRRLTYRPFNVETGVIPQANGSARVRLGGTDVIASV 60
Query: 1044 KVELGRPNSSQPDKGRVLIFVDCSPTAEPSFEGRGGDELAMELSVALERCLMGGKSGAGA 865
K ELG+P+ SQPDKG+V I+VDCSPTA P FEGRGG+EL+ ELS AL+ CL+GGKSGAGA
Sbjct: 61 KAELGKPSPSQPDKGKVNIYVDCSPTAAPMFEGRGGEELSTELSGALQHCLLGGKSGAGA 120
Query: 864 GIDLSSLSIVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVQVSSEAS-D 688
GIDLSSL +VEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKV+V+ AS D
Sbjct: 121 GIDLSSLVVVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVEVAVGASGD 180
Query: 687 SQPEVDVSDEEFLQFDTSGVP 625
PEVD+SD+E+LQFDTSGVP
Sbjct: 181 GLPEVDISDDEYLQFDTSGVP 201
Score = 75.9 bits (185), Expect(2) = e-103
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -1
Query: 509 VSISLNRQGRICGLTKRGGAGLDPSVILDMISVAKHVSEELMITVD 372
VS+S++ QGRICGL KRGGAGLDPSVILDMISVAKHVSE+LM +D
Sbjct: 229 VSVSVSGQGRICGLIKRGGAGLDPSVILDMISVAKHVSEQLMNKLD 274
>gb|AFK49136.1| unknown [Lotus japonicus]
Length = 286
Score = 329 bits (844), Expect(2) = e-103
Identities = 161/201 (80%), Positives = 188/201 (93%), Gaps = 1/201 (0%)
Frame = -3
Query: 1224 MVGLSIGEQHFIQGGIAQDLRTDGRKRLTYRPIYIQTGVIPQANGSARVKMGATEVIASV 1045
MVGLS+GE+HFIQGGIAQDLR DGRKRLTYRPIY++TGVIPQA+GSAR++MGATEVIASV
Sbjct: 1 MVGLSLGERHFIQGGIAQDLRCDGRKRLTYRPIYVETGVIPQAHGSARIRMGATEVIASV 60
Query: 1044 KVELGRPNSSQPDKGRVLIFVDCSPTAEPSFEGRGGDELAMELSVALERCLMGGKSGAGA 865
K ELG+P+ QPDKG+V I++DCS TAEP+FEGRGGD+L+ ELSVAL+R L+G KSGAGA
Sbjct: 61 KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDDLSAELSVALQRSLLGAKSGAGA 120
Query: 864 GIDLSSLSIVEGKVCWDLYIDGLVVSSDGNLLDALGAAIKAALTNTGIPKVQVSSEAS-D 688
GIDLSSL +VEGK+CWDLYIDGLVVSSDGNLLDALGAAIKAAL+NTGIP+VQV++ AS D
Sbjct: 121 GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180
Query: 687 SQPEVDVSDEEFLQFDTSGVP 625
+PEV++SD+EFLQFDTSGVP
Sbjct: 181 EKPEVEISDDEFLQFDTSGVP 201
Score = 74.3 bits (181), Expect(2) = e-103
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = -1
Query: 509 VSISLNRQGRICGLTKRGGAGLDPSVILDMISVAKHVSEELMITVD 372
VSIS+NRQG ICG+TKRG GLDPS++LDMISVAKHVSE+L+ +D
Sbjct: 229 VSISVNRQGHICGITKRGSVGLDPSIVLDMISVAKHVSEQLINKLD 274