BLASTX nr result

ID: Lithospermum22_contig00007006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00007006
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like...   219   7e-55
ref|XP_002519321.1| conserved hypothetical protein [Ricinus comm...   217   2e-54
ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like...   215   8e-54
ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|1...   213   3e-53
emb|CBI26010.3| unnamed protein product [Vitis vinifera]              213   5e-53

>ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like isoform 1 [Vitis
           vinifera] gi|359477274|ref|XP_003631957.1| PREDICTED:
           rRNA-processing protein fcf2-like isoform 2 [Vitis
           vinifera]
          Length = 198

 Score =  219 bits (557), Expect = 7e-55
 Identities = 111/194 (57%), Positives = 139/194 (71%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3   RSMVGLKWEPKVAGFGCSSK-ATDPS-----------LRPNSELVDGLFVPPSDPXXXXX 146
           ++++GL WEPK++    + K  +D S            +P+SELVDGLFVPP++P     
Sbjct: 5   KAVIGLSWEPKLSLLSSAPKNGSDKSENVAENSGASLWKPDSELVDGLFVPPNNPRKVNK 64

Query: 147 XXXXXXXDTAGMNWFDMGAPTVTAELKMDLELLKLRSVMDPKRHYKKTHFKSKSLPKYFQ 326
                  DT G  WFDM APT+T ELK DL+LLKLRS +DPKRHYKK+  KSK+LPKYFQ
Sbjct: 65  LLRKQVKDTTGTKWFDMPAPTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQ 124

Query: 327 VGTVIEPATEFYTSRLTNKERKPRFAHELLSDASLAQYRKRKVREIEDKNRPAGVDKWKI 506
           VGTVIE A++F++ RLT KERK   A ELLS++S A YRKRKVREIE++NRPAGVDKWKI
Sbjct: 125 VGTVIESASDFFSGRLTKKERKASLADELLSNSSFADYRKRKVREIEEQNRPAGVDKWKI 184

Query: 507 RGQSSRQRAKNRRH 548
           +G+ S +R K RRH
Sbjct: 185 KGRQSWKRKKQRRH 198


>ref|XP_002519321.1| conserved hypothetical protein [Ricinus communis]
           gi|223541636|gb|EEF43185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  217 bits (553), Expect = 2e-54
 Identities = 105/194 (54%), Positives = 138/194 (71%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3   RSMVGLKWEPKVAGFGCSSKATDPSLRP------------NSELVDGLFVPPSDPXXXXX 146
           + ++GL WEPK+     S+  ++   +             N+EL+DGLFVPP++P     
Sbjct: 7   KPVIGLSWEPKLPSLSSSTDFSNNKTKSKHQPESSALWKSNAELIDGLFVPPNNPAKFNK 66

Query: 147 XXXXXXXDTAGMNWFDMGAPTVTAELKMDLELLKLRSVMDPKRHYKKTHFKSKSLPKYFQ 326
                  DT G NWFDM APT+T ELK DL+LLKLRSV+DPKRHYKK+  KSK+LPKYFQ
Sbjct: 67  LLKSQAKDTLGKNWFDMPAPTMTPELKKDLQLLKLRSVLDPKRHYKKSELKSKALPKYFQ 126

Query: 327 VGTVIEPATEFYTSRLTNKERKPRFAHELLSDASLAQYRKRKVREIEDKNRPAGVDKWKI 506
           VGTV+E AT++++ RLT KERKP  A E+LSD +LA YRKRKVREIE+++ P G ++WKI
Sbjct: 127 VGTVVESATDYFSGRLTKKERKPTLAEEILSDRTLAAYRKRKVREIEEQDGPGGNERWKI 186

Query: 507 RGQSSRQRAKNRRH 548
           +G+ SR+RAK+RRH
Sbjct: 187 KGRHSRKRAKDRRH 200


>ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus]
           gi|449523942|ref|XP_004168982.1| PREDICTED:
           rRNA-processing protein fcf2-like [Cucumis sativus]
          Length = 197

 Score =  215 bits (548), Expect = 8e-54
 Identities = 111/193 (57%), Positives = 136/193 (70%), Gaps = 11/193 (5%)
 Frame = +3

Query: 3   RSMVGLKWEPKV--AGFGCSSKATDPS---------LRPNSELVDGLFVPPSDPXXXXXX 149
           + ++GL WEPK+  +  G  +K  D S          + NSELVDGLFVPP++P      
Sbjct: 5   KPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKKLNKL 64

Query: 150 XXXXXXDTAGMNWFDMGAPTVTAELKMDLELLKLRSVMDPKRHYKKTHFKSKSLPKYFQV 329
                 DTAG NWFDM A T+T E++ DL LLKLRSV+DPKRHYKK   KSK+LPKYFQV
Sbjct: 65  LRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQV 124

Query: 330 GTVIEPATEFYTSRLTNKERKPRFAHELLSDASLAQYRKRKVREIEDKNRPAGVDKWKIR 509
           GTV+E + +F++ RLT KERK   A ELLSD +L QYRKRKVREIE++NRP G DKWKIR
Sbjct: 125 GTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKIR 184

Query: 510 GQSSRQRAKNRRH 548
           G  SR+RAK+RR+
Sbjct: 185 GHHSRKRAKDRRN 197


>ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|118488000|gb|ABK95821.1|
           unknown [Populus trichocarpa]
           gi|222852582|gb|EEE90129.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  213 bits (543), Expect = 3e-53
 Identities = 107/190 (56%), Positives = 130/190 (68%), Gaps = 10/190 (5%)
 Frame = +3

Query: 9   MVGLKWEPKVAGFGCSS----------KATDPSLRPNSELVDGLFVPPSDPXXXXXXXXX 158
           ++GL W P +     S+          +++    +PNS+LVDGLFVPP+DP         
Sbjct: 9   VIGLSWHPTLPILSSSTTKNIKTPDEAESSSALWKPNSQLVDGLFVPPNDPIKLNKLRKS 68

Query: 159 XXXDTAGMNWFDMGAPTVTAELKMDLELLKLRSVMDPKRHYKKTHFKSKSLPKYFQVGTV 338
              DT G +WFDM APT+T ELK DL+LLKLRS +DPKRHYK+   KSK LPKYFQVGTV
Sbjct: 69  QRKDTLGKDWFDMPAPTITQELKRDLQLLKLRSAIDPKRHYKRGDPKSKDLPKYFQVGTV 128

Query: 339 IEPATEFYTSRLTNKERKPRFAHELLSDASLAQYRKRKVREIEDKNRPAGVDKWKIRGQS 518
           +E AT+FY+ RLT KERK   A ELL D +   YRKRKVREIE+KNRP G DKWKI+G+ 
Sbjct: 129 VESATDFYSGRLTKKERKATIADELLYDQTFRAYRKRKVREIEEKNRPGGNDKWKIKGKQ 188

Query: 519 SRQRAKNRRH 548
           SR+RAK RRH
Sbjct: 189 SRKRAKERRH 198


>emb|CBI26010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  213 bits (541), Expect = 5e-53
 Identities = 108/194 (55%), Positives = 136/194 (70%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3   RSMVGLKWEPKVAGFGCSSK-ATDPS-----------LRPNSELVDGLFVPPSDPXXXXX 146
           ++++GL WEPK++    + K  +D S            +P+SELVDGLFVPP++P     
Sbjct: 5   KAVIGLSWEPKLSLLSSAPKNGSDKSENVAENSGASLWKPDSELVDGLFVPPNNPRKVNK 64

Query: 147 XXXXXXXDTAGMNWFDMGAPTVTAELKMDLELLKLRSVMDPKRHYKKTHFKSKSLPKYFQ 326
                  DT G  WFDM APT+T ELK DL+LLKLRS +DPKRHYKK+  KSK+LPKYFQ
Sbjct: 65  LLRKQVKDTTGTKWFDMPAPTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQ 124

Query: 327 VGTVIEPATEFYTSRLTNKERKPRFAHELLSDASLAQYRKRKVREIEDKNRPAGVDKWKI 506
              VIE A++F++ RLT KERK   A ELLS++S A YRKRKVREIE++NRPAGVDKWKI
Sbjct: 125 ASLVIESASDFFSGRLTKKERKASLADELLSNSSFADYRKRKVREIEEQNRPAGVDKWKI 184

Query: 507 RGQSSRQRAKNRRH 548
           +G+ S +R K RRH
Sbjct: 185 KGRQSWKRKKQRRH 198


Top