BLASTX nr result

ID: Lithospermum22_contig00006973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006973
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|ABK94153.1| unknown [Populus trichocarpa]                          182   1e-43
ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   180   4e-43
ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   177   4e-42
ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...   176   5e-42

>ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|222871151|gb|EEF08282.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/125 (69%), Positives = 93/125 (74%)
 Frame = +2

Query: 179 MAGRLSHVASRIMGGNGXXXXXXXXXXXXXXGMGLSVGKHIVPNKPLPANDELVWDNGSA 358
           MAGRLS+VASRIMGGNG              GMGL VGKHIVP+KP+  NDEL WDNG+A
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 359 YPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXXVWNDKASTIPFTPKVYPYDNLKME 538
           +PEPCIDRIADTVGKYEALAWLC             VWNDKASTIPF PKVYPYDNLK+E
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 539 LGGEP 553
           LGGEP
Sbjct: 121 LGGEP 125


>gb|ABK94153.1| unknown [Populus trichocarpa]
          Length = 125

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/125 (69%), Positives = 93/125 (74%)
 Frame = +2

Query: 179 MAGRLSHVASRIMGGNGXXXXXXXXXXXXXXGMGLSVGKHIVPNKPLPANDELVWDNGSA 358
           MAGRLS+VASRIMGGNG              GMGL VGKHIVP+KP+  NDEL WDNG+A
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLSSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 359 YPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXXVWNDKASTIPFTPKVYPYDNLKME 538
           +PEPCIDRIADTVGKYEALAWLC             VWNDKASTIPF PKVYPYDNLK+E
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 539 LGGEP 553
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score =  180 bits (456), Expect = 4e-43
 Identities = 84/125 (67%), Positives = 94/125 (75%)
 Frame = +2

Query: 179 MAGRLSHVASRIMGGNGXXXXXXXXXXXXXXGMGLSVGKHIVPNKPLPANDELVWDNGSA 358
           MAGRLS+VASRIMGG+G              GMGL VGKHIVPNKPLP NDEL+WDNG+ 
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 359 YPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXXVWNDKASTIPFTPKVYPYDNLKME 538
           +PEPCIDRIA+TVGKYEALAW+C             VWNDKAS IPFTP+VYPYDNL++E
Sbjct: 61  FPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRVYPYDNLRVE 120

Query: 539 LGGEP 553
           LGGEP
Sbjct: 121 LGGEP 125


>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  177 bits (448), Expect = 4e-42
 Identities = 83/125 (66%), Positives = 93/125 (74%)
 Frame = +2

Query: 179 MAGRLSHVASRIMGGNGXXXXXXXXXXXXXXGMGLSVGKHIVPNKPLPANDELVWDNGSA 358
           MAGRL++ ASRI+GGNG              GMGL VGKH VP+KPLP N+EL+WDNG+A
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 359 YPEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXXVWNDKASTIPFTPKVYPYDNLKME 538
           +PEPCIDRIADTVGKYEALAWLC             VWNDKAS IPFTPKVYPYDNL++E
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 539 LGGEP 553
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  176 bits (447), Expect = 5e-42
 Identities = 84/124 (67%), Positives = 91/124 (73%)
 Frame = +2

Query: 182 AGRLSHVASRIMGGNGXXXXXXXXXXXXXXGMGLSVGKHIVPNKPLPANDELVWDNGSAY 361
           AGRLS+VASRIMGGNG              GMGL VGKHIVP+KPLP N+ELVWDNG+ +
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 362 PEPCIDRIADTVGKYEALAWLCXXXXXXXXXXXXXVWNDKASTIPFTPKVYPYDNLKMEL 541
           PEPCIDRIADTVGKYEALAWLC             VWNDKAS IP+ PKVYPYDNL+ EL
Sbjct: 63  PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPYDNLRAEL 122

Query: 542 GGEP 553
           GGEP
Sbjct: 123 GGEP 126


Top