BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006942
         (1345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteo...   386   e-105
gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]       383   e-104
ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-...   378   e-102
ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arab...   377   e-102
gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|2319768...   376   e-102

>ref|XP_004147236.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 4, chloroplastic-like [Cucumis sativus]
            gi|449510487|ref|XP_004163680.1| PREDICTED: ATP-dependent
            Clp protease proteolytic subunit-related protein 4,
            chloroplastic-like [Cucumis sativus]
          Length = 304

 Score =  386 bits (991), Expect = e-105
 Identities = 197/247 (79%), Positives = 214/247 (86%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1110 ASDLSGLKIRPDSLSPN-STTSRPKRSVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVFL 934
            + + SG+K+RP SL+PN S  S+ KR VVTMVIPF+RGSAWEQPPPDLASYLYKNRIV+L
Sbjct: 58   SGEFSGVKLRPSSLNPNYSPGSKGKRGVVTMVIPFARGSAWEQPPPDLASYLYKNRIVYL 117

Query: 933  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYVNSTGTTKDGEKLGYETEAFAIYDVMRYV 754
            GMSLVPSVTELILAEFLYLQYEDE KPIYLYVNSTGTTK GEKLGYETEAFA+YDVM YV
Sbjct: 118  GMSLVPSVTELILAEFLYLQYEDETKPIYLYVNSTGTTKGGEKLGYETEAFAVYDVMSYV 177

Query: 753  KPPIFTLCVXXXXXXXXXXXXXXAKGNRSALPSSTIMIKQPIARFQGQASDVELMRKEVR 574
            KPPIFTLCV              A GNRSALPSSTIMIK+PIARFQGQA+DVE+ RKEVR
Sbjct: 178  KPPIFTLCVGNAWGEAALLLAAGAPGNRSALPSSTIMIKEPIARFQGQATDVEIARKEVR 237

Query: 573  NVKGELVKLLSKHTGKSTEEIEDDIRRPKYFSPSEAVEYGLIDKVIYNERGKEDRGVLSD 394
            NVK ELVKL +KH GKSTEEIE DIRRPKYFSPSEAVEYG+IDKV+YNER  EDRGV+SD
Sbjct: 238  NVKAELVKLYAKHIGKSTEEIEADIRRPKYFSPSEAVEYGIIDKVLYNERATEDRGVVSD 297

Query: 393  LKRAQLI 373
            LK+AQLI
Sbjct: 298  LKKAQLI 304


>gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
          Length = 305

 Score =  383 bits (984), Expect = e-104
 Identities = 196/247 (79%), Positives = 213/247 (86%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1110 ASDLSGLKIRPDSLSPNSTT-SRPKRSVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVFL 934
            +S+ SG K+RP SL+P S   S PKR VVTMVI F RGSAWEQPPPDLASYLYKNRIV+L
Sbjct: 58   SSEFSGHKLRPSSLNPASFRGSEPKRGVVTMVILFQRGSAWEQPPPDLASYLYKNRIVYL 117

Query: 933  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYVNSTGTTKDGEKLGYETEAFAIYDVMRYV 754
            GMSLVPSVTELILAEFLYLQYED+ KPIYLY+NSTGTTK GEKLGYETEAFAIYDVMRYV
Sbjct: 118  GMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYV 177

Query: 753  KPPIFTLCVXXXXXXXXXXXXXXAKGNRSALPSSTIMIKQPIARFQGQASDVELMRKEVR 574
            KPPIFTLCV              AKGNRSALPSSTIM+KQPIARFQGQA+D+EL R+EVR
Sbjct: 178  KPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQGQATDIELARREVR 237

Query: 573  NVKGELVKLLSKHTGKSTEEIEDDIRRPKYFSPSEAVEYGLIDKVIYNERGKEDRGVLSD 394
            NVK ELVKL +KH GKSTE+IE DIRRPKYFSPSEAVEYG+IDKV+YNER  EDRGV+SD
Sbjct: 238  NVKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVLYNERSTEDRGVVSD 297

Query: 393  LKRAQLI 373
            LK+AQLI
Sbjct: 298  LKKAQLI 304


>ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit-related protein 4
            [Arabidopsis thaliana]
            gi|75301253|sp|Q8LB10.1|CLPR4_ARATH RecName:
            Full=ATP-dependent Clp protease proteolytic
            subunit-related protein 4, chloroplastic; Short=ClpR4;
            Flags: Precursor gi|21593086|gb|AAM65035.1| ATP-dependent
            Clp protease proteolytic subunit ClpR4, putative
            [Arabidopsis thaliana] gi|26450085|dbj|BAC42162.1|
            putative ClpP protease complex subunit ClpR4 [Arabidopsis
            thaliana] gi|332658442|gb|AEE83842.1| ATP-dependent Clp
            protease proteolytic subunit-related protein 4
            [Arabidopsis thaliana]
          Length = 305

 Score =  378 bits (970), Expect = e-102
 Identities = 189/247 (76%), Positives = 218/247 (88%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1110 ASDLSGLKIRPDSLSP-NSTTSRPKRSVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVFL 934
            +SDL G K+R +SL+P N ++S+PKR VVTMVIPFS+GSA EQPPPDLASYL+KNRIV+L
Sbjct: 59   SSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYL 118

Query: 933  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYVNSTGTTKDGEKLGYETEAFAIYDVMRYV 754
            GMSLVPSVTELILAEFLYLQYEDEEKPIYLY+NSTGTTK+GEKLGY+TEAFAIYDVM YV
Sbjct: 119  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYV 178

Query: 753  KPPIFTLCVXXXXXXXXXXXXXXAKGNRSALPSSTIMIKQPIARFQGQASDVELMRKEVR 574
            KPPIFTLCV              AKGNRSALPSSTIMIKQPIARFQGQA+DVE+ RKE++
Sbjct: 179  KPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIK 238

Query: 573  NVKGELVKLLSKHTGKSTEEIEDDIRRPKYFSPSEAVEYGLIDKVIYNERGKEDRGVLSD 394
            ++K E+VKL SKH GKS E+IE D++RPKYFSP+EAVEYG+IDKV+YNERG +DRGV+SD
Sbjct: 239  HIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSD 298

Query: 393  LKRAQLI 373
            LK+AQLI
Sbjct: 299  LKKAQLI 305


>ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
            lyrata] gi|297313924|gb|EFH44347.1| hypothetical protein
            ARALYDRAFT_493172 [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  377 bits (969), Expect = e-102
 Identities = 189/247 (76%), Positives = 217/247 (87%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1110 ASDLSGLKIRPDSLSP-NSTTSRPKRSVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVFL 934
            +SD  G K+R +SL+P N ++S+PKR VVTMVIPFS+GSA EQPPPDLASYL+KNRIV+L
Sbjct: 59   SSDFCGAKLRAESLNPLNLSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYL 118

Query: 933  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYVNSTGTTKDGEKLGYETEAFAIYDVMRYV 754
            GMSLVPSVTELILAEFLYLQYEDEEKPIYLY+NSTGTTK+GEKLGY+TEAFAIYDVM YV
Sbjct: 119  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYV 178

Query: 753  KPPIFTLCVXXXXXXXXXXXXXXAKGNRSALPSSTIMIKQPIARFQGQASDVELMRKEVR 574
            KPPIFTLCV              AKGNRSALPSSTIMIKQPIARFQGQA+DVE+ RKE++
Sbjct: 179  KPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIK 238

Query: 573  NVKGELVKLLSKHTGKSTEEIEDDIRRPKYFSPSEAVEYGLIDKVIYNERGKEDRGVLSD 394
            ++K E+VKL SKH GKS E+IE D++RPKYFSPSEAVEYG+IDKV+YNERG +DRGV+SD
Sbjct: 239  HIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPSEAVEYGIIDKVVYNERGSQDRGVVSD 298

Query: 393  LKRAQLI 373
            LK+AQLI
Sbjct: 299  LKKAQLI 305


>gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|23197684|gb|AAN15369.1|
            unknown protein [Arabidopsis thaliana]
          Length = 305

 Score =  376 bits (966), Expect = e-102
 Identities = 188/247 (76%), Positives = 218/247 (88%), Gaps = 1/247 (0%)
 Frame = -2

Query: 1110 ASDLSGLKIRPDSLSP-NSTTSRPKRSVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVFL 934
            +SDL G K+R +SL+P N ++S+PKR VVTMVIPFS+GSA EQPPPDLASYL+KNRIV+L
Sbjct: 59   SSDLCGAKLRAESLNPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKNRIVYL 118

Query: 933  GMSLVPSVTELILAEFLYLQYEDEEKPIYLYVNSTGTTKDGEKLGYETEAFAIYDVMRYV 754
            GMSLVPSVTELILAEFLYLQYEDE+KPIYLY+NSTGTTK+GEKLGY+TEAFAIYDVM YV
Sbjct: 119  GMSLVPSVTELILAEFLYLQYEDEKKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYV 178

Query: 753  KPPIFTLCVXXXXXXXXXXXXXXAKGNRSALPSSTIMIKQPIARFQGQASDVELMRKEVR 574
            KPPIFTLCV              AKGNRSALPSSTIMIKQPIARFQGQA+DVE+ RKE++
Sbjct: 179  KPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIK 238

Query: 573  NVKGELVKLLSKHTGKSTEEIEDDIRRPKYFSPSEAVEYGLIDKVIYNERGKEDRGVLSD 394
            ++K E+VKL SKH GKS E+IE D++RPKYFSP+EAVEYG+IDKV+YNERG +DRGV+SD
Sbjct: 239  HIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSD 298

Query: 393  LKRAQLI 373
            LK+AQLI
Sbjct: 299  LKKAQLI 305