BLASTX nr result

ID: Lithospermum22_contig00006891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00006891
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   255   1e-65
ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 ...   253   5e-65
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   249   8e-64
gb|AFK65745.1| C3HC4 transcription factor [Gossypium hirsutum]        242   2e-61
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   241   4e-61

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  255 bits (652), Expect = 1e-65
 Identities = 116/165 (70%), Positives = 135/165 (81%), Gaps = 4/165 (2%)
 Frame = -3

Query: 848 DAGNFECNICFELAQDPIVTLCGHLYCWPCLYQWLQVHSHSHECPVCKALVQEEKLVPIY 669
           DAGNFECNICF+LAQDPIVTLCGHL+CWPCLY+WL +HSHS ECPVCKALV+EEKLVP+Y
Sbjct: 27  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHIHSHSQECPVCKALVEEEKLVPLY 86

Query: 668 GRGKSSVDPRPQLIPEVNIPNRPIGQRPQTAPPVDINYFRQNE---LDHTAGYSPMAAAR 498
           GRGK+S DPR + IP +NIPNRP GQRP+TAPP D N+F Q+    +    G++PMA AR
Sbjct: 87  GRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPPDANHFMQHGFGFMGGLGGFAPMATAR 146

Query: 497 FGNLTLSALFGAI-PAFFNLQVHGFHDATVYGATTGVPYMFSSSF 366
           FGN TLSA FG + P+ FNLQVHGF DAT+YG   G PY FS+SF
Sbjct: 147 FGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPAAGFPYGFSNSF 191


>ref|XP_002284651.1| PREDICTED: E3 ubiquitin-protein ligase RNF5 [Vitis vinifera]
           gi|147795942|emb|CAN60863.1| hypothetical protein
           VITISV_016726 [Vitis vinifera]
          Length = 229

 Score =  253 bits (647), Expect = 5e-65
 Identities = 115/163 (70%), Positives = 133/163 (81%), Gaps = 2/163 (1%)
 Frame = -3

Query: 848 DAGNFECNICFELAQDPIVTLCGHLYCWPCLYQWLQVHSHSHECPVCKALVQEEKLVPIY 669
           D G+FECNICFELAQDPIVTLCGHL+CWPCLY+WL +HSHSHECPVCKALVQEEKLVP+Y
Sbjct: 25  DTGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHIHSHSHECPVCKALVQEEKLVPLY 84

Query: 668 GRGKSSVDPRPQLIPEVNIPNRPIGQRPQTAPPVDINYFRQNE-LDHTAGYSPMAAARFG 492
           GRGK+  DPR + +P +NIPNRP GQRP+ AP  D+N+F   +      G+ PMA+ARFG
Sbjct: 85  GRGKTPSDPRSRSVPGINIPNRPAGQRPEVAPRPDVNHFPPPQGYGFMGGFMPMASARFG 144

Query: 491 NLTLSALFGA-IPAFFNLQVHGFHDATVYGATTGVPYMFSSSF 366
           NLTLSA FG  IP+  NL VHGFHDATVYG T+G PY FS+SF
Sbjct: 145 NLTLSAAFGGLIPSLLNLHVHGFHDATVYGTTSGFPYGFSNSF 187


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  249 bits (637), Expect = 8e-64
 Identities = 116/165 (70%), Positives = 133/165 (80%), Gaps = 4/165 (2%)
 Frame = -3

Query: 848 DAGNFECNICFELAQDPIVTLCGHLYCWPCLYQWLQVHSHSHECPVCKALVQEEKLVPIY 669
           DAGNFECNICF+LAQDPIVTLCGHL+CWPCLY+WL  HS S ECPVCKALV+EEKLVP+Y
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSQSKECPVCKALVEEEKLVPLY 85

Query: 668 GRGKSSVDPRPQLIPEVNIPNRPIGQRPQTAPPVDINYFRQNE---LDHTAGYSPMAAAR 498
           GRGK+S DPR + IP VNIPNRP GQRP+TAPP + N+F Q+    +    G++PMA AR
Sbjct: 86  GRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPNHFAQHGFGFMGGLGGFAPMATAR 145

Query: 497 FGNLTLSALFGA-IPAFFNLQVHGFHDATVYGATTGVPYMFSSSF 366
           FGN TLSA FG  IP+ FNLQVHGF DA +YG  TG PY FS+SF
Sbjct: 146 FGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGFPYGFSNSF 190


>gb|AFK65745.1| C3HC4 transcription factor [Gossypium hirsutum]
          Length = 236

 Score =  242 bits (617), Expect = 2e-61
 Identities = 113/165 (68%), Positives = 128/165 (77%), Gaps = 4/165 (2%)
 Frame = -3

Query: 848 DAGNFECNICFELAQDPIVTLCGHLYCWPCLYQWLQVHSHSHECPVCKALVQEEKLVPIY 669
           DAGNFECNICF+LAQDPIVTLCGHL+CWPCLY+WL  HS S ECPVCKALV+E+KL P+Y
Sbjct: 26  DAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHTHSRSQECPVCKALVEEQKLAPLY 85

Query: 668 GRGKSSVDPRPQLIPEVNIPNRPIGQRPQTAPPVDINYFRQNE---LDHTAGYSPMAAAR 498
           GRGKSS DPR + IP VNIPNRP GQRP+TAPP   N F QN    +    G++PMA AR
Sbjct: 86  GRGKSSTDPRSKSIPGVNIPNRPAGQRPETAPPPAPNQFPQNGFGFMGGLGGFAPMATAR 145

Query: 497 FGNLTLSALFGA-IPAFFNLQVHGFHDATVYGATTGVPYMFSSSF 366
           FGN TLSA FG  IP+ FNLQVHGF DA ++G   G PY F SS+
Sbjct: 146 FGNFTLSAAFGGLIPSLFNLQVHGFPDAAMFGPAAGFPYGFPSSY 190


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  241 bits (614), Expect = 4e-61
 Identities = 111/165 (67%), Positives = 129/165 (78%), Gaps = 4/165 (2%)
 Frame = -3

Query: 848 DAGNFECNICFELAQDPIVTLCGHLYCWPCLYQWLQVHSHSHECPVCKALVQEEKLVPIY 669
           DAGNFECNICF+LAQDPI+TLCGHL+CWPCLY+WL  HS S ECPVCKALV+EEKLVP+Y
Sbjct: 25  DAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSRECPVCKALVEEEKLVPLY 84

Query: 668 GRGKSSVDPRPQLIPEVNIPNRPIGQRPQTAPPVDINYFRQNELDHT---AGYSPMAAAR 498
           GRGK+S DPR + IP VNIP+RP GQRP+TAPP + N F  +    T    G++P A AR
Sbjct: 85  GRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPEPNPFAHHGFGFTGGLGGFAPAATAR 144

Query: 497 FGNLTLSALFGA-IPAFFNLQVHGFHDATVYGATTGVPYMFSSSF 366
           FGN TLSA FG  IP+ FN Q+HGFH AT+YG   G PY FS+SF
Sbjct: 145 FGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAPGFPYGFSNSF 189


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