BLASTX nr result
ID: Lithospermum22_contig00006818
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00006818
(1248 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containi... 540 e-151
emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera] 538 e-150
ref|XP_003631155.1| Pentatricopeptide repeat-containing protein ... 503 e-140
ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|2... 493 e-137
ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containi... 479 e-133
>ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 540 bits (1391), Expect = e-151
Identities = 246/411 (59%), Positives = 325/411 (79%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KC L Y+R+IF M RNE++WSAMIG V D +KE LEL +M K + P+P L
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
+++R CA +T+L+ G+++H Y++KLG + D+++GN+LLS+YAKC V+ DA+RFF EM
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPK 376
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAH 544
DSVS++AI+SGCVQNGNA +L+I R M +SG++PDL TM PACSHLAAL+HG C+H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 545 GYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGK 724
GY +VRGF D ICNALIDMYSKCGKI+ A VF+ ++ D+VSWNAMI G+G+HGLG
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 725 EAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCM 904
EA+ LFHD+ +G +PDD+TF+ L+S+CSHSG V EG+ WF AMS ++ I P+M+H +CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 905 VDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPETT 1084
VD+L RAGL+DEA+ FI+ MP +P VRIW++LL++CRIHKNI+LGE+VS IQSLGPE+T
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 1085 GNSVLLSNLYSTAGRWSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAFVG 1237
GN VLLSN+YS AGRW DAAH+R QKD GL+K+PGCSW+E +G++HAFVG
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVG 667
Score = 159 bits (401), Expect = 2e-36
Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KCG L ++R+F++M R+ + W+AMI C + + ++L+ +M+++ G+ P+ + +
Sbjct: 156 KCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEE-GICPNSSTIV 214
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
++ L GK +H Y V+ ++VG LL +YAKC+ + A + F M
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLM-SGVEPDLATMTSFFPACSHLAALRHGCCA 541
+ VS++A+I G V + + +L + +M++ ++P T+ S AC+ L L G
Sbjct: 275 NEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 542 HGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLG 721
H Y + G D+ + N L+ MY+KCG I+ A FD N +D VS++A++ G +G
Sbjct: 335 HCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNA 394
Query: 722 KEAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEP--KMDHY 895
A+S+F MQ G PD T +G++ ACSH ++ G S Y I D
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG-----FCSHGYLIVRGFATDTL 449
Query: 896 LC--MVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIH 1021
+C ++D+ S+ G + A M V WN+++ IH
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVS-WNAMIIGYGIH 492
Score = 140 bits (352), Expect = 9e-31
Identities = 99/388 (25%), Positives = 184/388 (47%), Gaps = 3/388 (0%)
Frame = +2
Query: 8 CGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLAT 187
C + +RR+F + + I W+ +I A ++L M GV P+
Sbjct: 56 CNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPF 114
Query: 188 IIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFID 367
+++ C+ + + G ++H + GL D+ V +L+ YAKC ++ +A R F M+ D
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 368 SVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHG 547
V++NA+I+GC G + ++ ++ +M G+ P+ +T+ P AL HG HG
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234
Query: 548 YSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKE 727
Y V R F + + L+DMY+KC + A +FD R+ VSW+AMI G+ KE
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKE 294
Query: 728 AISLFHDM-QTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYL-- 898
A+ LF M P VT ++ AC+ + G++ + + + +D L
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK---LGSVLDILLGN 351
Query: 899 CMVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPE 1078
++ + ++ G++D+A F M +V ++++++ C + N + + ++Q G +
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDEMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 1079 TTGNSVLLSNLYSTAGRWSDAAHVRALQ 1162
+L + G +H+ ALQ
Sbjct: 411 --------PDLTTMLGVLPACSHLAALQ 430
Score = 117 bits (292), Expect = 8e-24
Identities = 67/217 (30%), Positives = 108/217 (49%)
Frame = +2
Query: 188 IIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFID 367
++ C +L K++H + +K D V + L LY C + A R F E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 368 SVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHG 547
+ +N II NG + ++++ ML GV P+ T ACS L A+ G H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 548 YSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKE 727
++ + G D+ +C AL+D Y+KCG + A +F + + RDVV+WNAMI G ++GL +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 728 AISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGK 838
A+ L MQ G P+ T +G++ + + GK
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 538 bits (1385), Expect = e-150
Identities = 245/411 (59%), Positives = 324/411 (78%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KC L Y+R+IF M RNE++WSAMIG V D +KE LEL +M K + P+P L
Sbjct: 257 KCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLG 316
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
+++R CA +T+L+ G+++H Y++KLG + D+++GN+LLS+YAKC V+ DA+RFF M
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPK 376
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAH 544
DSVS++AI+SGCVQNGNA +L+I R M +SG++PDL TM PACSHLAAL+HG C+H
Sbjct: 377 DSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSH 436
Query: 545 GYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGK 724
GY +VRGF D ICNALIDMYSKCGKI+ A VF+ ++ D+VSWNAMI G+G+HGLG
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496
Query: 725 EAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCM 904
EA+ LFHD+ +G +PDD+TF+ L+S+CSHSG V EG+ WF AMS ++ I P+M+H +CM
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICM 556
Query: 905 VDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPETT 1084
VD+L RAGL+DEA+ FI+ MP +P VRIW++LL++CRIHKNI+LGE+VS IQSLGPE+T
Sbjct: 557 VDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPEST 616
Query: 1085 GNSVLLSNLYSTAGRWSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAFVG 1237
GN VLLSN+YS AGRW DAAH+R QKD GL+K+PGCSW+E +G++HAFVG
Sbjct: 617 GNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVG 667
Score = 159 bits (401), Expect = 2e-36
Identities = 102/344 (29%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KCG L ++R+F++M R+ + W+AMI C + + ++L+ +M+++ G+ P+ + +
Sbjct: 156 KCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEE-GICPNSSTIV 214
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
++ L GK +H Y V+ ++VG LL +YAKC+ + A + F M
Sbjct: 215 GVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVR 274
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLM-SGVEPDLATMTSFFPACSHLAALRHGCCA 541
+ VS++A+I G V + + +L + +M++ ++P T+ S AC+ L L G
Sbjct: 275 NEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 542 HGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLG 721
H Y + G D+ + N L+ MY+KCG I+ A FD N +D VS++A++ G +G
Sbjct: 335 HCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNA 394
Query: 722 KEAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEP--KMDHY 895
A+S+F MQ G PD T +G++ ACSH ++ G S Y I D
Sbjct: 395 AVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG-----FCSHGYLIVRGFATDTL 449
Query: 896 LC--MVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIH 1021
+C ++D+ S+ G + A M V WN+++ IH
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVS-WNAMIIGYGIH 492
Score = 140 bits (352), Expect = 9e-31
Identities = 99/388 (25%), Positives = 184/388 (47%), Gaps = 3/388 (0%)
Frame = +2
Query: 8 CGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLAT 187
C + +RR+F + + I W+ +I A ++L M GV P+
Sbjct: 56 CNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLH-LGVRPNKYTYPF 114
Query: 188 IIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFID 367
+++ C+ + + G ++H + GL D+ V +L+ YAKC ++ +A R F M+ D
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174
Query: 368 SVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHG 547
V++NA+I+GC G + ++ ++ +M G+ P+ +T+ P AL HG HG
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234
Query: 548 YSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKE 727
Y V R F + + L+DMY+KC + A +FD R+ VSW+AMI G+ KE
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKE 294
Query: 728 AISLFHDM-QTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYL-- 898
A+ LF M P VT ++ AC+ + G++ + + + +D L
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK---LGXVLDILLGN 351
Query: 899 CMVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPE 1078
++ + ++ G++D+A F M +V ++++++ C + N + + ++Q G +
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDXMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 1079 TTGNSVLLSNLYSTAGRWSDAAHVRALQ 1162
+L + G +H+ ALQ
Sbjct: 411 --------PDLTTMLGVLPACSHLAALQ 430
Score = 117 bits (292), Expect = 8e-24
Identities = 67/217 (30%), Positives = 108/217 (49%)
Frame = +2
Query: 188 IIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFID 367
++ C +L K++H + +K D V + L LY C + A R F E+
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 368 SVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHG 547
+ +N II NG + ++++ ML GV P+ T ACS L A+ G H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 548 YSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKE 727
++ + G D+ +C AL+D Y+KCG + A +F + + RDVV+WNAMI G ++GL +
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 728 AISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGK 838
A+ L MQ G P+ T +G++ + + GK
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGK 230
>ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 785
Score = 503 bits (1295), Expect = e-140
Identities = 235/411 (57%), Positives = 310/411 (75%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KC L Y+R+IF + +N++ WSAMIG V+ D + + L L +M G++P+PA LA
Sbjct: 257 KCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLA 316
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
T++R CA +T+L GK++H +++K G+ D VGNSL+S+YAKC +M +A+ F EM
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK 376
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAH 544
D+VSY+AIISGCVQNG AE +L I R+M SG+ P L TM + PACSHLAAL+HG C H
Sbjct: 377 DTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 545 GYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGK 724
GY+VVRGFT D +ICNA+IDMYSKCGKI ++ +FD RD++SWN MI G+G+HGL
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496
Query: 725 EAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCM 904
EA+SLF ++Q +G +PDDVT + ++SACSHSG V EGK WF +MS+ + I+P+M HY+CM
Sbjct: 497 EALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICM 556
Query: 905 VDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPETT 1084
VDLL+RAG LDEAY FI+ MP P VRIW +LLA+CR HKNI++GEQVS IQ LGPE T
Sbjct: 557 VDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGT 616
Query: 1085 GNSVLLSNLYSTAGRWSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAFVG 1237
GN VL+SN+YS+ GRW DAA++R++Q+ G +K PGCSWVE GVIH F+G
Sbjct: 617 GNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIG 667
Score = 130 bits (327), Expect = 7e-28
Identities = 84/332 (25%), Positives = 165/332 (49%), Gaps = 3/332 (0%)
Frame = +2
Query: 26 SRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLATIIRGCA 205
+R +F + + + W+ MI ++ + L M + GV+P+ +++ C+
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ-LGVTPTNFTFPFLLKACS 118
Query: 206 MITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFIDS--VSY 379
+ L G+ +H + LGL DL V +LL +YAKC + A F ++ D V++
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 380 NAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHGYSVV 559
NA+I+ + +++ + +M +GV P+ +T+ S P AL G H Y +
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 560 RGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKEAISL 739
F ++ + AL+DMY+KC + A +F+ NK++ V W+AMI G+ +H +A++L
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 740 FHDMQTV-GQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCMVDLL 916
+ DM + G P T ++ AC+ ++ GK+ M + G++ ++ +
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMY 357
Query: 917 SRAGLLDEAYMFIKGMPIDPAVRIWNSLLASC 1012
++ G++D A F+ M V ++++++ C
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVS-YSAIISGC 388
>ref|XP_002331135.1| predicted protein [Populus trichocarpa] gi|222872863|gb|EEF09994.1|
predicted protein [Populus trichocarpa]
Length = 799
Score = 493 bits (1270), Expect = e-137
Identities = 234/415 (56%), Positives = 307/415 (73%), Gaps = 3/415 (0%)
Frame = +2
Query: 2 GKCGWLAYSRRIFAAMKF-RNEITWSAMIGACVVCDRLKEGLELLWE--MRKKAGVSPSP 172
GKC + Y+RRIF M +NE+TWSAM+GA VVCD ++E LEL + M K + S
Sbjct: 266 GKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSA 325
Query: 173 ALLATIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKE 352
LAT+IR CA +T+L+TG +H Y +K G + DL+VGN+LLS+YAKC ++ A+RFF E
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 353 MTFIDSVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHG 532
M D+VS+ AIISG VQNGN+E L + M +SG+ P+ AT+ S PAC+HLA L +G
Sbjct: 386 MDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYG 445
Query: 533 CCAHGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVH 712
C+H Y+++ GFT D ICNALIDMY+KCGKI+ A VFD +KR +VSWN MI +G+H
Sbjct: 446 SCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIH 505
Query: 713 GLGKEAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDH 892
G+G EA+ LF +MQ+ G +PDDVTF+ L+SACSHSG V EGK WF AM++++GI P+M+H
Sbjct: 506 GIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEH 565
Query: 893 YLCMVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLG 1072
Y CMVDLLSRAGL E + FI+ MP++P VR+W +LL++CR++KN++LGE VS IQ LG
Sbjct: 566 YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLG 625
Query: 1073 PETTGNSVLLSNLYSTAGRWSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAFVG 1237
PE+TGN VLLSN+YS GRW DAA VR QK+ G K PGCSW+E GV+H F+G
Sbjct: 626 PESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLG 680
Score = 148 bits (374), Expect = 2e-33
Identities = 98/348 (28%), Positives = 175/348 (50%), Gaps = 9/348 (2%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMI-GACVVCDRLKEGLELLWEMRKKAGVSPSPALL 181
KCG L ++ +F M R+ + W++MI G + E LL +M+ VSP+ + +
Sbjct: 166 KCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN--DVSPNSSTI 223
Query: 182 ATIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTF 361
++ A + +L GK++H + V+ G + D++VG +L +Y KC+ + A R F M
Sbjct: 224 VGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGI 283
Query: 362 I-DSVSYNAIISGCVQNGNAEASLNILRRMLM---SGVEPDLATMTSFFPACSHLAALRH 529
+ + V+++A++ V +L + ++LM + T+ + C++L L
Sbjct: 284 VKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLST 343
Query: 530 GCCAHGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGV 709
G C H Y++ GF DL + N L+ MY+KCG IN A F+ + RD VS+ A+I G+
Sbjct: 344 GTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQ 403
Query: 710 HGLGKEAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGI--EPK 883
+G +E + +F +MQ G P+ T ++ AC+H + G + S Y I
Sbjct: 404 NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYG-----SCSHCYAIICGFT 458
Query: 884 MDHYLC--MVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIH 1021
D +C ++D+ ++ G +D A M + WN+++ + IH
Sbjct: 459 ADTMICNALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIH 505
Score = 119 bits (299), Expect = 1e-24
Identities = 76/269 (28%), Positives = 142/269 (52%), Gaps = 4/269 (1%)
Frame = +2
Query: 8 CGWLAYSRRIFAAMKFR--NEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALL 181
C L +R +F M R N + W+ +I A +E ++L ++M G++P+
Sbjct: 64 CSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY-GITPNRFTF 122
Query: 182 ATIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTF 361
+++ C+ + + G+++H + +L L ++ V +L+ YAKC + DA F +M
Sbjct: 123 PFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK 182
Query: 362 IDSVSYNAIISG-CVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCC 538
D V++N++ISG + G+ + +L +M + V P+ +T+ PA + + +LRHG
Sbjct: 183 RDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKE 241
Query: 539 AHGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTN-KRDVVSWNAMICGFGVHG 715
HG+ V RGF D+ + ++D+Y KC I+ A +FD ++ V+W+AM+ + V
Sbjct: 242 IHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCD 301
Query: 716 LGKEAISLFHDMQTVGQRPDDVTFMGLVS 802
+EA+ LF + + DDV + V+
Sbjct: 302 FMREALELFCQLLML---KDDVIVLSAVT 327
Score = 63.2 bits (152), Expect = 1e-07
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Frame = +2
Query: 596 LIDMYSKCGKINVAWLVFDNTNKR--DVVSWNAMICGFGVHGLGKEAISLFHDMQTVGQR 769
L+D+Y C ++ +A VFD R +VV WN +I + +G +EAI L++ M G
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 770 PDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCMVDLLSRAGLLDEAYM 949
P+ TF ++ ACS EG+ + + +E + +VD ++ G LD+A
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDI-KRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 950 FIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPETTGNSVLLSNLYSTAGR 1129
M V WNS+++ +H+ ++V+ ++ + + + NS + + +
Sbjct: 176 VFDKMHKRDVV-AWNSMISGFSLHEGSY--DEVARLLVQMQNDVSPNSSTIVGVLPAVAQ 232
Query: 1130 WSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAF 1231
+ H + + R G V G G++ +
Sbjct: 233 VNSLRHGKEIHGFCVRRGFVG-DVVVGTGILDVY 265
>ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
[Brachypodium distachyon]
Length = 808
Score = 479 bits (1232), Expect = e-133
Identities = 225/411 (54%), Positives = 298/411 (72%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KCG L Y+ R+F AM RNE+TWSA++G V+C R+ E L +M + SP +A
Sbjct: 280 KCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA 339
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFI 364
+ +R CA +++L GKQ+H + K GL DL GNSLLS+YAK ++ A F +M
Sbjct: 340 SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK 399
Query: 365 DSVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAH 544
D+VSY+A++SG VQNG A+ + + R+M V+PD+ATM S PACSHLAAL+HG C H
Sbjct: 400 DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGH 459
Query: 545 GYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGK 724
G +VRG + +ICNALIDMY+KCG+I+++ +FD RD+VSWN MI G+G+HGLGK
Sbjct: 460 GSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGK 519
Query: 725 EAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYLCM 904
EA +LF DM+ PDDVTF+ L+SACSHSG V EGKRWF M+ +YGI P+M+HY+ M
Sbjct: 520 EATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGM 579
Query: 905 VDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSIIQSLGPETT 1084
VDLL+R G LDEAY FI+GMP+ VR+W +LL +CR+HKNI LG+QVSS+IQ LGPE T
Sbjct: 580 VDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGT 639
Query: 1085 GNSVLLSNLYSTAGRWSDAAHVRALQKDSGLRKLPGCSWVEGDGVIHAFVG 1237
GN VLLSN++S AGR+ +AA VR +QK+ G +K PGCSW+E +G +HAF+G
Sbjct: 640 GNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIG 690
Score = 139 bits (349), Expect = 2e-30
Identities = 96/358 (26%), Positives = 177/358 (49%), Gaps = 7/358 (1%)
Frame = +2
Query: 5 KCGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLA 184
KC ++ +F M R+ + W+AM+ + + + + L M+ +P+ + L
Sbjct: 176 KCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDH--APNASTLV 233
Query: 185 TIIRGCAMITNLNTGKQMHIYVVKLGLIYD----LIVGNSLLSLYAKCRVMGDALRFFKE 352
++ A L+ G+ +H Y V+ ++D ++VG +LL +YAKC + A R F+
Sbjct: 234 ALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEA 293
Query: 353 MTFIDSVSYNAIISGCVQNGNAEASLNILRRMLMSG---VEPDLATMTSFFPACSHLAAL 523
M + V+++A++ G V G + ++ + ML G + P ++ S AC++L+ L
Sbjct: 294 MAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDL 351
Query: 524 RHGCCAHGYSVVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGF 703
G H G DL N+L+ MY+K G I+ A +FD +D VS++A++ G+
Sbjct: 352 CLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGY 411
Query: 704 GVHGLGKEAISLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPK 883
+G EA +F MQ +PD T + L+ ACSH ++ GK ++ GI +
Sbjct: 412 VQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASE 470
Query: 884 MDHYLCMVDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLLASCRIHKNIKLGEQVSSI 1057
++D+ ++ G +D + MP V WN+++A IH LG++ +++
Sbjct: 471 TSICNALIDMYAKCGRIDLSRQIFDVMPARDIVS-WNTMIAGYGIH---GLGKEATAL 524
Score = 115 bits (289), Expect = 2e-23
Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 7/332 (2%)
Frame = +2
Query: 8 CGWLAYSRRIFAAMKFRNEITWSAMIGACVVCDRLKEGLELLWEMRKKAGVSPSPALLAT 187
CG L+ +R +F + ++A+I A + L L +R++ P+
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPAL-ALRLYRSLRRRRLPQPNNYTFPF 134
Query: 188 IIRGCAMITNLNTGKQMHIYVVKLGLIYDLIVGNSLLSLYAKCRVMGDALRFFKEMTFID 367
+++ C+ + +L + + +H + + GL DL V +L+ +YAKC A F+ M D
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 368 SVSYNAIISGCVQNGNAEASLNILRRMLMSGVEPDLATMTSFFPACSHLAALRHGCCAHG 547
V++NA+++G +G ++ L ++ P+ +T+ + P + AL G H
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 548 YSV----VRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHG 715
YSV + + + AL+DMY+KCG + A VF+ R+ V+W+A++ GF + G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 716 LGKEAISLFHDMQTVG---QRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKM 886
EA SLF DM G P V + AC++ + GK+ A+ + G+ +
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQ-LHALLAKSGLHTDL 370
Query: 887 DHYLCMVDLLSRAGLLDEAYMFIKGMPIDPAV 982
++ + ++AGL+D+A M + V
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTV 402
Score = 75.5 bits (184), Expect = 3e-11
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 4/213 (1%)
Frame = +2
Query: 377 YNAIISGCVQNGNAEASLNILRRMLMSGV-EPDLATMTSFFPACSHLAALRHGCCAHGYS 553
YNA+I G A A L + R + + +P+ T ACS L LR H ++
Sbjct: 97 YNALIRAYSLRGPALA-LRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHA 155
Query: 554 VVRGFTKDLAICNALIDMYSKCGKINVAWLVFDNTNKRDVVSWNAMICGFGVHGLGKEAI 733
G DL + AL+D+Y+KC A VF RDVV+WNAM+ G+ +HG + I
Sbjct: 156 ARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTI 215
Query: 734 SLFHDMQTVGQRPDDVTFMGLVSACSHSGFVEEGKRWFLAMSEEYGIEPKMDHYL---CM 904
+ MQ P+ T + L+ + G + +G+ + D L +
Sbjct: 216 ACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTAL 274
Query: 905 VDLLSRAGLLDEAYMFIKGMPIDPAVRIWNSLL 1003
+D+ ++ G L A + M + V W++L+
Sbjct: 275 LDMYAKCGHLVYASRVFEAMAVRNEV-TWSALV 306